RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 CHPF2Q9P2E5 772 aa19.34■□□□□ 0.69
SMAD5-206ENST00000509962 MAP2K1Q02750 393 aaPredicted RBP19.33■□□□□ 0.68
SMAD5-206ENST00000509962 TNIP1Q15025 636 aa19.33■□□□□ 0.68
SMAD5-206ENST00000509962 HDGFL1Q5TGJ6 251 aa19.33■□□□□ 0.68
SMAD5-206ENST00000509962 CIAPIN1Q6FI81 312 aa19.33■□□□□ 0.68
SMAD5-206ENST00000509962 PAXIP1Q6ZW49 1069 aaPredicted RBP19.33■□□□□ 0.68
SMAD5-206ENST00000509962 TMC4Q7Z404 712 aa19.33■□□□□ 0.68
SMAD5-206ENST00000509962 PLBD2Q8NHP8 589 aa19.33■□□□□ 0.68
SMAD5-206ENST00000509962 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.68
SMAD5-206ENST00000509962 DBF4Q9UBU7 674 aaPredicted RBP19.33■□□□□ 0.68
SMAD5-206ENST00000509962 ADAMTS8Q9UP79 889 aa19.33■□□□□ 0.68
SMAD5-206ENST00000509962 LTBP1Q14766 1721 aa19.32■□□□□ 0.68
SMAD5-206ENST00000509962 FMR1Q06787 632 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMAD5-206ENST00000509962 KIAA2012Q0VF49 1180 aa19.32■□□□□ 0.68
SMAD5-206ENST00000509962 ZNF428Q96B54 188 aa19.32■□□□□ 0.68
SMAD5-206ENST00000509962 ANKRD36CQ5JPF3 1778 aa19.32■□□□□ 0.68
SMAD5-206ENST00000509962 TRAF5O00463 557 aa19.31■□□□□ 0.68
SMAD5-206ENST00000509962 HOXB7P09629 217 aa19.31■□□□□ 0.68
SMAD5-206ENST00000509962 ECE1P42892 770 aa19.31■□□□□ 0.68
SMAD5-206ENST00000509962 GMPSP49915 693 aaPredicted RBP19.31■□□□□ 0.68
SMAD5-206ENST00000509962 LBX1P52954 281 aa19.31■□□□□ 0.68
SMAD5-206ENST00000509962 RAD17O75943 681 aa19.3■□□□□ 0.68
SMAD5-206ENST00000509962 CST9Q5W186 159 aa19.3■□□□□ 0.68
SMAD5-206ENST00000509962 FAM89AQ96GI7 184 aa19.3■□□□□ 0.68
SMAD5-206ENST00000509962 CFAP44Q96MT7 982 aa19.3■□□□□ 0.68
SMAD5-206ENST00000509962 HYPKQ9NX55 129 aa19.3■□□□□ 0.68
SMAD5-206ENST00000509962 LAMB2P55268 1798 aa19.29■□□□□ 0.68
SMAD5-206ENST00000509962 ATP5J2-PTCD1G3V325 749 aa19.29■□□□□ 0.68
SMAD5-206ENST00000509962 GRM1Q13255 1194 aa19.29■□□□□ 0.68
SMAD5-206ENST00000509962 CAPNS2Q96L46 248 aa19.29■□□□□ 0.68
SMAD5-206ENST00000509962 ISCA1Q9BUE6 129 aa19.29■□□□□ 0.68
SMAD5-206ENST00000509962 BEGAINQ9BUH8 593 aa19.29■□□□□ 0.68
SMAD5-206ENST00000509962 WASHC4Q2M389 1173 aa19.28■□□□□ 0.68
SMAD5-206ENST00000509962 DUSP27Q5VZP5 1158 aa19.28■□□□□ 0.68
SMAD5-206ENST00000509962 GPR101Q96P66 508 aaPredicted RBP19.28■□□□□ 0.68
SMAD5-206ENST00000509962 NSFL1CQ9UNZ2 370 aaKnown RBP19.28■□□□□ 0.68
SMAD5-206ENST00000509962 CDHR2Q9BYE9 1310 aa19.27■□□□□ 0.68
SMAD5-206ENST00000509962 H7C1D1 291 aa19.27■□□□□ 0.68
SMAD5-206ENST00000509962 SF3B3Q15393 1217 aaKnown RBP19.27■□□□□ 0.68
SMAD5-206ENST00000509962 CYP4F22Q6NT55 531 aa19.27■□□□□ 0.68
SMAD5-206ENST00000509962 ZC3H15Q8WU90 426 aaKnown RBP19.27■□□□□ 0.68
SMAD5-206ENST00000509962 PGAP2Q9UHJ9 254 aa19.27■□□□□ 0.68
SMAD5-206ENST00000509962 CNOT7Q9UIV1 285 aaKnown RBP19.27■□□□□ 0.68
SMAD5-206ENST00000509962 TLL2Q9Y6L7 1015 aa19.27■□□□□ 0.68
SMAD5-206ENST00000509962 TAF1P21675 1872 aa19.26■□□□□ 0.67
SMAD5-206ENST00000509962 TRPM7Q96QT4 1865 aa19.26■□□□□ 0.67
SMAD5-206ENST00000509962 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
SMAD5-206ENST00000509962 C6orf229H3BNL8 230 aa19.25■□□□□ 0.67
SMAD5-206ENST00000509962 CELF2O95319 508 aaKnown RBP19.25■□□□□ 0.67
SMAD5-206ENST00000509962 HSPA8P11142 646 aaKnown RBP19.25■□□□□ 0.67
SMAD5-206ENST00000509962 TRIM28Q13263 835 aaKnown RBP19.25■□□□□ 0.67
SMAD5-206ENST00000509962 CDC37L1Q7L3B6 337 aa19.25■□□□□ 0.67
SMAD5-206ENST00000509962 RIC3Q7Z5B4 369 aa19.25■□□□□ 0.67
SMAD5-206ENST00000509962 CELF1Q92879 486 aaKnown RBP19.25■□□□□ 0.67
SMAD5-206ENST00000509962 MBIPQ9NS73 344 aa19.25■□□□□ 0.67
SMAD5-206ENST00000509962 YDJCA8MPS7 323 aa19.24■□□□□ 0.67
SMAD5-206ENST00000509962 IRS4O14654 1257 aaPredicted RBP19.24■□□□□ 0.67
SMAD5-206ENST00000509962 RIMBP2O15034 1052 aa19.24■□□□□ 0.67
SMAD5-206ENST00000509962 HIRAP54198 1017 aaPredicted RBP19.24■□□□□ 0.67
SMAD5-206ENST00000509962 GLIS2Q9BZE0 524 aaPredicted RBP19.24■□□□□ 0.67
SMAD5-206ENST00000509962 HSP90B1P14625 803 aaKnown RBP19.23■□□□□ 0.67
SMAD5-206ENST00000509962 MAP2K2P36507 400 aa19.23■□□□□ 0.67
SMAD5-206ENST00000509962 RPS8P62241 208 aaKnown RBP19.23■□□□□ 0.67
SMAD5-206ENST00000509962 CALD1Q05682 793 aaKnown RBP19.23■□□□□ 0.67
SMAD5-206ENST00000509962 EYA3Q99504 573 aa19.23■□□□□ 0.67
SMAD5-206ENST00000509962 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
SMAD5-206ENST00000509962 GNAI1P63096 354 aa19.22■□□□□ 0.67
SMAD5-206ENST00000509962 GOLGA2Q08379 1002 aa19.22■□□□□ 0.67
SMAD5-206ENST00000509962 SAPCD2Q86UD0 394 aa19.22■□□□□ 0.67
SMAD5-206ENST00000509962 DPF2Q92785 391 aa19.22■□□□□ 0.67
SMAD5-206ENST00000509962 ZNF408Q9H9D4 720 aa19.22■□□□□ 0.67
SMAD5-206ENST00000509962 DBNDD1Q9H9R9 158 aa19.22■□□□□ 0.67
SMAD5-206ENST00000509962 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
SMAD5-206ENST00000509962 PSMD14O00487 310 aa19.21■□□□□ 0.67
SMAD5-206ENST00000509962 APAF1O14727 1248 aa19.21■□□□□ 0.67
SMAD5-206ENST00000509962 AOC2O75106 756 aa19.21■□□□□ 0.67
SMAD5-206ENST00000509962 ZNF853P0CG23 659 aa19.21■□□□□ 0.67
SMAD5-206ENST00000509962 GPSM2P81274 684 aa19.21■□□□□ 0.67
SMAD5-206ENST00000509962 DDX60Q8IY21 1712 aaKnown RBP19.21■□□□□ 0.67
SMAD5-206ENST00000509962 MICALL2Q8IY33 904 aa19.21■□□□□ 0.67
SMAD5-206ENST00000509962 ZBTB38Q8NAP3 1195 aaPredicted RBP19.21■□□□□ 0.67
SMAD5-206ENST00000509962 TRPM4Q8TD43 1214 aa19.21■□□□□ 0.67
SMAD5-206ENST00000509962 PRKRIP1Q9H875 184 aaPredicted RBP19.21■□□□□ 0.67
SMAD5-206ENST00000509962 IFT57Q9NWB7 429 aa19.21■□□□□ 0.67
SMAD5-206ENST00000509962 POLLQ9UGP5 575 aa19.21■□□□□ 0.67
SMAD5-206ENST00000509962 G3V3G9 751 aa19.2■□□□□ 0.66
SMAD5-206ENST00000509962 DCAF8Q5TAQ9 597 aa19.2■□□□□ 0.66
SMAD5-206ENST00000509962 USP48Q86UV5 1035 aa19.2■□□□□ 0.66
SMAD5-206ENST00000509962 HHIPL1Q96JK4 782 aa19.2■□□□□ 0.66
SMAD5-206ENST00000509962 CHMP4AQ9BY43 222 aa19.2■□□□□ 0.66
SMAD5-206ENST00000509962 ZC3H12CQ9C0D7 883 aaKnown RBP19.2■□□□□ 0.66
SMAD5-206ENST00000509962 PHAXQ9H814 394 aaKnown RBP19.2■□□□□ 0.66
SMAD5-206ENST00000509962 SHTN1A0MZ66 631 aa19.19■□□□□ 0.66
SMAD5-206ENST00000509962 DOK7Q18PE1 504 aa19.19■□□□□ 0.66
SMAD5-206ENST00000509962 SAMD7Q7Z3H4 446 aa19.19■□□□□ 0.66
SMAD5-206ENST00000509962 MYD88Q99836 296 aa19.19■□□□□ 0.66
SMAD5-206ENST00000509962 ECE2O60344 883 aa19.18■□□□□ 0.66
SMAD5-206ENST00000509962 RPS12P25398 132 aaKnown RBP19.18■□□□□ 0.66
SMAD5-206ENST00000509962 RBM26Q5T8P6 1007 aaKnown RBP19.18■□□□□ 0.66
SMAD5-206ENST00000509962 CCDC191Q8NCU4 936 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms