RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
PRDM16-205ENST00000509860 G3BP1Q13283 466 aaKnown RBP eCLIP15.25■□□□□ 0.03
PRDM16-205ENST00000509860 ZNF34Q8IZ26 560 aa15.25■□□□□ 0.03
PRDM16-205ENST00000509860 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
PRDM16-205ENST00000509860 KIF6Q6ZMV9 814 aa15.25■□□□□ 0.03
PRDM16-205ENST00000509860 IL17RAQ96F46 866 aa15.25■□□□□ 0.03
PRDM16-205ENST00000509860 GPTP24298 496 aa15.24■□□□□ 0.03
PRDM16-205ENST00000509860 AMIGO3Q86WK7 504 aa15.24■□□□□ 0.03
PRDM16-205ENST00000509860 CAMTA2O94983 1202 aa15.24■□□□□ 0.03
PRDM16-205ENST00000509860 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
PRDM16-205ENST00000509860 CCDC87Q9NVE4 849 aa15.24■□□□□ 0.03
PRDM16-205ENST00000509860 TAF1P21675 1872 aa15.23■□□□□ 0.03
PRDM16-205ENST00000509860 CDHR2Q9BYE9 1310 aa15.23■□□□□ 0.03
PRDM16-205ENST00000509860 CHGBP05060 677 aa15.23■□□□□ 0.03
PRDM16-205ENST00000509860 ERVV-1B6SEH8 477 aa15.23■□□□□ 0.03
PRDM16-205ENST00000509860 GLRX3O76003 335 aaKnown RBP15.23■□□□□ 0.03
PRDM16-205ENST00000509860 DZIP3Q86Y13 1208 aaKnown RBP15.23■□□□□ 0.03
PRDM16-205ENST00000509860 AKAP11Q9UKA4 1901 aa15.23■□□□□ 0.03
PRDM16-205ENST00000509860 EDC3Q96F86 508 aaKnown RBP15.22■□□□□ 0.03
PRDM16-205ENST00000509860 NDUFB9Q9Y6M9 179 aa15.22■□□□□ 0.03
PRDM16-205ENST00000509860 SGSM2O43147 1006 aa15.22■□□□□ 0.03
PRDM16-205ENST00000509860 LSG1Q9H089 658 aaKnown RBP15.22■□□□□ 0.03
PRDM16-205ENST00000509860 IFIT2P09913 472 aaKnown RBP15.22■□□□□ 0.03
PRDM16-205ENST00000509860 MYO5AQ9Y4I1 1855 aaKnown RBP15.22■□□□□ 0.03
PRDM16-205ENST00000509860 AFF2P51816 1311 aa15.22■□□□□ 0.03
PRDM16-205ENST00000509860 ONECUT3O60422 494 aaPredicted RBP15.21■□□□□ 0.03
PRDM16-205ENST00000509860 DBNDD2Q9BQY9 259 aa15.21■□□□□ 0.03
PRDM16-205ENST00000509860 SLKQ9H2G2 1235 aaPredicted RBP15.21■□□□□ 0.03
PRDM16-205ENST00000509860 BECN1Q14457 450 aa15.21■□□□□ 0.03
PRDM16-205ENST00000509860 GJD4Q96KN9 370 aaPredicted RBP15.2■□□□□ 0.02
PRDM16-205ENST00000509860 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
PRDM16-205ENST00000509860 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
PRDM16-205ENST00000509860 TTLL11Q8NHH1 800 aa15.2■□□□□ 0.02
PRDM16-205ENST00000509860 CNTROBQ8N137 903 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 GREM2Q9H772 168 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 SNRKQ9NRH2 765 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 CIAO1O76071 339 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 REC8O95072 547 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 CASC1Q6TDU7 716 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 BOLA2Q9H3K6 86 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 EYA2O00167 538 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 UBR3Q6ZT12 1888 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 FAM227BQ96M60 508 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 CHMP3Q9Y3E7 222 aa15.19■□□□□ 0.02
PRDM16-205ENST00000509860 A0A0G2JS52 829 aa15.18■□□□□ 0.02
PRDM16-205ENST00000509860 COL9A3Q14050 684 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-205ENST00000509860 MED23Q9ULK4 1368 aa15.18■□□□□ 0.02
PRDM16-205ENST00000509860 RAD50Q92878 1312 aa15.18■□□□□ 0.02
PRDM16-205ENST00000509860 ATP5JP18859 108 aa15.18■□□□□ 0.02
PRDM16-205ENST00000509860 PTH1RQ03431 593 aa15.18■□□□□ 0.02
PRDM16-205ENST00000509860 CTSWP56202 376 aa15.18■□□□□ 0.02
PRDM16-205ENST00000509860 NFKBIBQ15653 356 aa15.18■□□□□ 0.02
PRDM16-205ENST00000509860 CWC27Q6UX04 472 aaKnown RBP15.18■□□□□ 0.02
PRDM16-205ENST00000509860 VGLL2Q8N8G2 317 aa15.18■□□□□ 0.02
PRDM16-205ENST00000509860 TNRC6CQ9HCJ0 1690 aaKnown RBP15.18■□□□□ 0.02
PRDM16-205ENST00000509860 MYH7P12883 1935 aa15.18■□□□□ 0.02
PRDM16-205ENST00000509860 BCL2L12Q9HB09 334 aa15.17■□□□□ 0.02
PRDM16-205ENST00000509860 A0A0D9SFI3 127 aa15.17■□□□□ 0.02
PRDM16-205ENST00000509860 HSPA4P34932 840 aa15.17■□□□□ 0.02
PRDM16-205ENST00000509860 TIMM10P62072 90 aa15.17■□□□□ 0.02
PRDM16-205ENST00000509860 EVI5LQ96CN4 794 aa15.17■□□□□ 0.02
PRDM16-205ENST00000509860 NTSR2O95665 410 aa15.17■□□□□ 0.02
PRDM16-205ENST00000509860 ANO2Q9NQ90 1003 aa15.17■□□□□ 0.02
PRDM16-205ENST00000509860 LAMA4Q16363 1823 aa15.16■□□□□ 0.02
PRDM16-205ENST00000509860 RABEP1Q15276 862 aa15.16■□□□□ 0.02
PRDM16-205ENST00000509860 RIPOR2Q9Y4F9 1068 aa15.16■□□□□ 0.02
PRDM16-205ENST00000509860 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
PRDM16-205ENST00000509860 GPR108Q9NPR9 543 aa15.16■□□□□ 0.02
PRDM16-205ENST00000509860 CNTNAP4Q9C0A0 1308 aa15.16■□□□□ 0.02
PRDM16-205ENST00000509860 IRS4O14654 1257 aaPredicted RBP15.16■□□□□ 0.02
PRDM16-205ENST00000509860 IL15P40933 162 aaPredicted RBP15.16■□□□□ 0.02
PRDM16-205ENST00000509860 NMIQ13287 307 aaPredicted RBP15.16■□□□□ 0.02
PRDM16-205ENST00000509860 K7ELQ4 463 aaPredicted RBP15.15■□□□□ 0.02
PRDM16-205ENST00000509860 ADORA1P30542 326 aa15.15■□□□□ 0.02
PRDM16-205ENST00000509860 SLFNL1Q499Z3 407 aa15.15■□□□□ 0.02
PRDM16-205ENST00000509860 HSP90AB3PQ58FF7 597 aa15.15■□□□□ 0.02
PRDM16-205ENST00000509860 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
PRDM16-205ENST00000509860 HAUS7Q99871 368 aa15.15■□□□□ 0.02
PRDM16-205ENST00000509860 ZNF589Q86UQ0 364 aaPredicted RBP15.15■□□□□ 0.02
PRDM16-205ENST00000509860 SMARCC1Q92922 1105 aaPredicted RBP15.15■□□□□ 0.02
PRDM16-205ENST00000509860 DOCK2Q92608 1830 aa15.15■□□□□ 0.02
PRDM16-205ENST00000509860 FRAT2O75474 233 aaPredicted RBP15.15■□□□□ 0.02
PRDM16-205ENST00000509860 ITGA6P23229 1130 aa15.15■□□□□ 0.02
PRDM16-205ENST00000509860 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
PRDM16-205ENST00000509860 TRMT112Q9UI30 125 aaKnown RBP15.14■□□□□ 0.01
PRDM16-205ENST00000509860 GPATCH3Q96I76 525 aa15.14■□□□□ 0.01
PRDM16-205ENST00000509860 A0A1B0GUL7 405 aa15.14■□□□□ 0.01
PRDM16-205ENST00000509860 KCNB2Q92953 911 aa15.14■□□□□ 0.01
PRDM16-205ENST00000509860 TAF6LQ9Y6J9 622 aa15.14■□□□□ 0.01
PRDM16-205ENST00000509860 SNX14Q9Y5W7 946 aa15.13■□□□□ 0.01
PRDM16-205ENST00000509860 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
PRDM16-205ENST00000509860 SCARF1Q14162 830 aa15.13■□□□□ 0.01
PRDM16-205ENST00000509860 EPB41L2O43491 1005 aaKnown RBP15.12■□□□□ 0.01
PRDM16-205ENST00000509860 PAXIP1Q6ZW49 1069 aaPredicted RBP15.12■□□□□ 0.01
PRDM16-205ENST00000509860 SEPT12Q8IYM1 358 aa15.12■□□□□ 0.01
PRDM16-205ENST00000509860 PDE8AO60658 829 aa15.12■□□□□ 0.01
PRDM16-205ENST00000509860 CCDC57Q2TAC2 916 aa15.12■□□□□ 0.01
PRDM16-205ENST00000509860 LRRC4BQ9NT99 713 aa15.12■□□□□ 0.01
PRDM16-205ENST00000509860 ANAPC15P60006 121 aa15.11■□□□□ 0.01
PRDM16-205ENST00000509860 RFX7Q2KHR2 1363 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms