RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 ATF7IPQ6VMQ6 1270 aa20.75■□□□□ 0.91
SKP2-205ENST00000509692 JARID2Q92833 1246 aaPredicted RBP20.75■□□□□ 0.91
SKP2-205ENST00000509692 SNED1Q8TER0 1413 aa20.75■□□□□ 0.91
SKP2-205ENST00000509692 CWF19L2Q2TBE0 894 aaKnown RBP20.75■□□□□ 0.91
SKP2-205ENST00000509692 PCCAP05165 728 aaPredicted RBP20.74■□□□□ 0.91
SKP2-205ENST00000509692 TRIM27P14373 513 aa20.74■□□□□ 0.91
SKP2-205ENST00000509692 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
SKP2-205ENST00000509692 PPEF1O14829 653 aaPredicted RBP20.73■□□□□ 0.91
SKP2-205ENST00000509692 SF3B3Q15393 1217 aaKnown RBP20.73■□□□□ 0.91
SKP2-205ENST00000509692 BEND3Q5T5X7 828 aa20.73■□□□□ 0.91
SKP2-205ENST00000509692 RTKN2Q8IZC4 609 aa20.73■□□□□ 0.91
SKP2-205ENST00000509692 LINS1Q8NG48 757 aa20.73■□□□□ 0.91
SKP2-205ENST00000509692 NEURL1BA8MQ27 555 aa20.72■□□□□ 0.91
SKP2-205ENST00000509692 FKBP4Q02790 459 aaKnown RBP eCLIP20.72■□□□□ 0.91
SKP2-205ENST00000509692 TNNQ9UQP3 1299 aa20.72■□□□□ 0.91
SKP2-205ENST00000509692 DDX46Q7L014 1031 aaKnown RBP20.71■□□□□ 0.91
SKP2-205ENST00000509692 ZC3H4Q9UPT8 1303 aaKnown RBP20.71■□□□□ 0.91
SKP2-205ENST00000509692 CC2D2BQ6DHV5 1058 aa20.71■□□□□ 0.91
SKP2-205ENST00000509692 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.71■□□□□ 0.91
SKP2-205ENST00000509692 CLUAP1Q96AJ1 413 aa20.71■□□□□ 0.91
SKP2-205ENST00000509692 SRCIN1Q9C0H9 1055 aa20.71■□□□□ 0.91
SKP2-205ENST00000509692 ZNF277Q9NRM2 450 aaPredicted RBP20.71■□□□□ 0.91
SKP2-205ENST00000509692 COL4A1P02462 1669 aa20.7■□□□□ 0.9
SKP2-205ENST00000509692 PLIN1O60240 522 aa20.7■□□□□ 0.9
SKP2-205ENST00000509692 GRAPQ13588 217 aa20.7■□□□□ 0.9
SKP2-205ENST00000509692 GRAPLQ8TC17 118 aaPredicted RBP20.7■□□□□ 0.9
SKP2-205ENST00000509692 ATP6V0A2Q9Y487 856 aa20.7■□□□□ 0.9
SKP2-205ENST00000509692 ALDH1L1O75891 902 aa20.69■□□□□ 0.9
SKP2-205ENST00000509692 BBOX1O75936 387 aa20.69■□□□□ 0.9
SKP2-205ENST00000509692 NMRK2Q9NPI5 230 aa20.69■□□□□ 0.9
SKP2-205ENST00000509692 KIF3CO14782 793 aa20.68■□□□□ 0.9
SKP2-205ENST00000509692 CCT4P50991 539 aaKnown RBP20.68■□□□□ 0.9
SKP2-205ENST00000509692 GCKRQ14397 625 aa20.68■□□□□ 0.9
SKP2-205ENST00000509692 FTSJ3Q8IY81 847 aaKnown RBP20.68■□□□□ 0.9
SKP2-205ENST00000509692 CELF1Q92879 486 aaKnown RBP20.68■□□□□ 0.9
SKP2-205ENST00000509692 PSMD1Q99460 953 aa20.68■□□□□ 0.9
SKP2-205ENST00000509692 CDHR2Q9BYE9 1310 aa20.68■□□□□ 0.9
SKP2-205ENST00000509692 PDE8AO60658 829 aa20.67■□□□□ 0.9
SKP2-205ENST00000509692 DZIP1LQ8IYY4 767 aaKnown RBP20.67■□□□□ 0.9
SKP2-205ENST00000509692 H7C1W4 665 aa20.67■□□□□ 0.9
SKP2-205ENST00000509692 MS4A1P11836 297 aa20.67■□□□□ 0.9
SKP2-205ENST00000509692 INTS3Q68E01 1043 aaKnown RBP20.67■□□□□ 0.9
SKP2-205ENST00000509692 SP8Q8IXZ3 490 aa20.67■□□□□ 0.9
SKP2-205ENST00000509692 GLTPD2A6NH11 291 aa20.66■□□□□ 0.9
SKP2-205ENST00000509692 HSP90B1P14625 803 aaKnown RBP20.66■□□□□ 0.9
SKP2-205ENST00000509692 RRP1P56182 461 aaKnown RBP20.66■□□□□ 0.9
SKP2-205ENST00000509692 SEC31BQ9NQW1 1179 aa20.66■□□□□ 0.9
SKP2-205ENST00000509692 KDM2BQ8NHM5 1336 aa20.66■□□□□ 0.9
SKP2-205ENST00000509692 MYH3P11055 1940 aa20.65■□□□□ 0.9
SKP2-205ENST00000509692 RLBP1P12271 317 aa20.65■□□□□ 0.9
SKP2-205ENST00000509692 IARSP41252 1262 aaKnown RBP20.65■□□□□ 0.9
SKP2-205ENST00000509692 GRIPAP1Q4V328 841 aa20.65■□□□□ 0.9
SKP2-205ENST00000509692 UBE3BQ7Z3V4 1068 aa20.65■□□□□ 0.9
SKP2-205ENST00000509692 TMEM57Q8N5G2 664 aa20.65■□□□□ 0.9
SKP2-205ENST00000509692 CCDC85AQ96PX6 553 aaPredicted RBP20.65■□□□□ 0.9
SKP2-205ENST00000509692 CASP7P55210 303 aa20.64■□□□□ 0.9
SKP2-205ENST00000509692 C1QTNF8P60827 252 aa20.64■□□□□ 0.9
SKP2-205ENST00000509692 PANK1Q8TE04 598 aa20.64■□□□□ 0.9
SKP2-205ENST00000509692 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.89
SKP2-205ENST00000509692 RRAGCQ9HB90 399 aa20.64■□□□□ 0.89
SKP2-205ENST00000509692 C9orf78Q9NZ63 289 aaPredicted RBP20.64■□□□□ 0.89
SKP2-205ENST00000509692 COL4A5P29400 1685 aa20.63■□□□□ 0.89
SKP2-205ENST00000509692 LRRC37AA6NMS7 1700 aa20.63■□□□□ 0.89
SKP2-205ENST00000509692 CEP350Q5VT06 3117 aa20.63■□□□□ 0.89
SKP2-205ENST00000509692 GRM8O00222 908 aa20.63■□□□□ 0.89
SKP2-205ENST00000509692 CTSWP56202 376 aa20.63■□□□□ 0.89
SKP2-205ENST00000509692 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
SKP2-205ENST00000509692 RPS8P62241 208 aaKnown RBP20.62■□□□□ 0.89
SKP2-205ENST00000509692 TMC4Q7Z404 712 aa20.62■□□□□ 0.89
SKP2-205ENST00000509692 TTLL11Q8NHH1 800 aa20.62■□□□□ 0.89
SKP2-205ENST00000509692 SUPT16HQ9Y5B9 1047 aaKnown RBP20.62■□□□□ 0.89
SKP2-205ENST00000509692 CENPBP07199 599 aaPredicted RBP20.61■□□□□ 0.89
SKP2-205ENST00000509692 PDE3AQ14432 1141 aa20.61■□□□□ 0.89
SKP2-205ENST00000509692 DPY19L2Q6NUT2 758 aa20.61■□□□□ 0.89
SKP2-205ENST00000509692 MPNDQ8N594 471 aa20.61■□□□□ 0.89
SKP2-205ENST00000509692 RTFDC1Q9BY42 306 aaPredicted RBP20.61■□□□□ 0.89
SKP2-205ENST00000509692 DDNO94850 711 aaPredicted RBP20.6■□□□□ 0.89
SKP2-205ENST00000509692 C20orf194Q5TEA3 1177 aa20.6■□□□□ 0.89
SKP2-205ENST00000509692 DPP8Q6V1X1 898 aaPredicted RBP20.6■□□□□ 0.89
SKP2-205ENST00000509692 ITPRIPQ8IWB1 547 aa20.6■□□□□ 0.89
SKP2-205ENST00000509692 USP44Q9H0E7 712 aa20.6■□□□□ 0.89
SKP2-205ENST00000509692 UTYO14607 1347 aa20.6■□□□□ 0.89
SKP2-205ENST00000509692 POTECB2RU33 542 aa20.6■□□□□ 0.89
SKP2-205ENST00000509692 NBPF7P0C2Y1 421 aaPredicted RBP20.6■□□□□ 0.89
SKP2-205ENST00000509692 PLA2G12BQ9BX93 195 aa20.6■□□□□ 0.89
SKP2-205ENST00000509692 GREM2Q9H772 168 aa20.6■□□□□ 0.89
SKP2-205ENST00000509692 DUOX1Q9NRD9 1551 aa20.59■□□□□ 0.89
SKP2-205ENST00000509692 ZNF541Q9H0D2 1346 aa20.59■□□□□ 0.89
SKP2-205ENST00000509692 FZD9O00144 591 aa20.59■□□□□ 0.89
SKP2-205ENST00000509692 WDR90Q96KV7 1748 aa20.59■□□□□ 0.89
SKP2-205ENST00000509692 AOC3Q16853 763 aa20.58■□□□□ 0.89
SKP2-205ENST00000509692 LARGE2Q8N3Y3 721 aa20.58■□□□□ 0.89
SKP2-205ENST00000509692 JDP2Q8WYK2 163 aa20.58■□□□□ 0.89
SKP2-205ENST00000509692 PPIP5K2O43314 1243 aa20.57■□□□□ 0.88
SKP2-205ENST00000509692 GPSM2P81274 684 aa20.57■□□□□ 0.88
SKP2-205ENST00000509692 MEIS3Q99687 375 aa20.57■□□□□ 0.88
SKP2-205ENST00000509692 NSFL1CQ9UNZ2 370 aaKnown RBP20.57■□□□□ 0.88
SKP2-205ENST00000509692 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
SKP2-205ENST00000509692 LTBP1Q14766 1721 aa20.57■□□□□ 0.88
SKP2-205ENST00000509692 TOMM70O94826 608 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms