RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 TMC4Q7Z404 712 aa30.34■■■□□ 2.45
ATP2C1-217ENST00000509662 LAMB2P55268 1798 aa30.33■■■□□ 2.45
ATP2C1-217ENST00000509662 SNED1Q8TER0 1413 aa30.33■■■□□ 2.45
ATP2C1-217ENST00000509662 FSTL1Q12841 308 aa30.33■■■□□ 2.45
ATP2C1-217ENST00000509662 DDNO94850 711 aaPredicted RBP30.32■■■□□ 2.44
ATP2C1-217ENST00000509662 PCCAP05165 728 aaPredicted RBP30.32■■■□□ 2.44
ATP2C1-217ENST00000509662 ZBED9Q6R2W3 1325 aa30.31■■■□□ 2.44
ATP2C1-217ENST00000509662 G2E3Q7L622 706 aa30.31■■■□□ 2.44
ATP2C1-217ENST00000509662 SUPT20HQ8NEM7 779 aa30.31■■■□□ 2.44
ATP2C1-217ENST00000509662 FLIIQ13045 1269 aa30.3■■■□□ 2.44
ATP2C1-217ENST00000509662 LARGE2Q8N3Y3 721 aa30.3■■■□□ 2.44
ATP2C1-217ENST00000509662 VPS33BQ9H267 617 aa30.3■■■□□ 2.44
ATP2C1-217ENST00000509662 DDX60Q8IY21 1712 aaKnown RBP30.3■■■□□ 2.44
ATP2C1-217ENST00000509662 WDR90Q96KV7 1748 aa30.3■■■□□ 2.44
ATP2C1-217ENST00000509662 DPP8Q6V1X1 898 aaPredicted RBP30.29■■■□□ 2.44
ATP2C1-217ENST00000509662 MPNDQ8N594 471 aa30.29■■■□□ 2.44
ATP2C1-217ENST00000509662 SMC1BQ8NDV3 1235 aa30.29■■■□□ 2.44
ATP2C1-217ENST00000509662 POTECB2RU33 542 aa30.28■■■□□ 2.44
ATP2C1-217ENST00000509662 FZD9O00144 591 aa30.28■■■□□ 2.44
ATP2C1-217ENST00000509662 CACNA1FO60840 1977 aa30.28■■■□□ 2.44
ATP2C1-217ENST00000509662 IQCA1LA6NCM1 817 aa30.27■■■□□ 2.44
ATP2C1-217ENST00000509662 PDE8AO60658 829 aa30.27■■■□□ 2.44
ATP2C1-217ENST00000509662 EIF6P56537 245 aaKnown RBP30.27■■■□□ 2.44
ATP2C1-217ENST00000509662 FKBP5Q13451 457 aaPredicted RBP30.27■■■□□ 2.44
ATP2C1-217ENST00000509662 IGKV5-2P06315 115 aa30.26■■■□□ 2.43
ATP2C1-217ENST00000509662 RTFDC1Q9BY42 306 aaPredicted RBP30.26■■■□□ 2.43
ATP2C1-217ENST00000509662 PPIP5K2O43314 1243 aa30.25■■■□□ 2.43
ATP2C1-217ENST00000509662 APLP1P51693 650 aa30.25■■■□□ 2.43
ATP2C1-217ENST00000509662 CCDC152Q4G0S7 254 aa30.25■■■□□ 2.43
ATP2C1-217ENST00000509662 L3MBTL3Q96JM7 780 aaPredicted RBP30.25■■■□□ 2.43
ATP2C1-217ENST00000509662 RPS8P62241 208 aaKnown RBP30.24■■■□□ 2.43
ATP2C1-217ENST00000509662 SLC51AQ86UW1 340 aa30.24■■■□□ 2.43
ATP2C1-217ENST00000509662 NIM1KQ8IY84 436 aa30.24■■■□□ 2.43
ATP2C1-217ENST00000509662 JARID2Q92833 1246 aaPredicted RBP30.24■■■□□ 2.43
ATP2C1-217ENST00000509662 CELF1Q92879 486 aaKnown RBP30.24■■■□□ 2.43
ATP2C1-217ENST00000509662 CDHR2Q9BYE9 1310 aa30.23■■■□□ 2.43
ATP2C1-217ENST00000509662 ZNF541Q9H0D2 1346 aa30.23■■■□□ 2.43
ATP2C1-217ENST00000509662 GPC2Q8N158 579 aa30.23■■■□□ 2.43
ATP2C1-217ENST00000509662 DNAAF4Q8WXU2 420 aa30.23■■■□□ 2.43
ATP2C1-217ENST00000509662 NEURL1BA8MQ27 555 aa30.22■■■□□ 2.43
ATP2C1-217ENST00000509662 CT47B1P0C2W7 299 aaPredicted RBP30.22■■■□□ 2.43
ATP2C1-217ENST00000509662 CWF19L2Q2TBE0 894 aaKnown RBP30.22■■■□□ 2.43
ATP2C1-217ENST00000509662 AOC3Q16853 763 aa30.21■■■□□ 2.43
ATP2C1-217ENST00000509662 TAF1P21675 1872 aa30.21■■■□□ 2.43
ATP2C1-217ENST00000509662 LINS1Q8NG48 757 aa30.19■■■□□ 2.42
ATP2C1-217ENST00000509662 SSH1Q8WYL5 1049 aa30.19■■■□□ 2.42
ATP2C1-217ENST00000509662 HACL1Q9UJ83 578 aa30.19■■■□□ 2.42
ATP2C1-217ENST00000509662 NSFL1CQ9UNZ2 370 aaKnown RBP30.19■■■□□ 2.42
ATP2C1-217ENST00000509662 MRPL50Q8N5N7 158 aaKnown RBP30.18■■■□□ 2.42
ATP2C1-217ENST00000509662 GJA3Q9Y6H8 435 aa30.18■■■□□ 2.42
ATP2C1-217ENST00000509662 H7C1W4 665 aa30.17■■■□□ 2.42
ATP2C1-217ENST00000509662 KIAA2012Q0VF49 1180 aa30.17■■■□□ 2.42
ATP2C1-217ENST00000509662 GCKRQ14397 625 aa30.17■■■□□ 2.42
ATP2C1-217ENST00000509662 SEC31BQ9NQW1 1179 aa30.17■■■□□ 2.42
ATP2C1-217ENST00000509662 ZNRF3Q9ULT6 936 aa30.17■■■□□ 2.42
ATP2C1-217ENST00000509662 SCN4AP35499 1836 aa30.17■■■□□ 2.42
ATP2C1-217ENST00000509662 CTSWP56202 376 aa30.16■■■□□ 2.42
ATP2C1-217ENST00000509662 ALDH1L2Q3SY69 923 aa30.16■■■□□ 2.42
ATP2C1-217ENST00000509662 UBE3BQ7Z3V4 1068 aa30.16■■■□□ 2.42
ATP2C1-217ENST00000509662 TAF1DQ9H5J8 278 aaPredicted RBP30.16■■■□□ 2.42
ATP2C1-217ENST00000509662 CCDC85AQ96PX6 553 aaPredicted RBP30.15■■■□□ 2.42
ATP2C1-217ENST00000509662 BCL2L13Q9BXK5 485 aa30.14■■■□□ 2.42
ATP2C1-217ENST00000509662 COL4A5P29400 1685 aa30.14■■■□□ 2.41
ATP2C1-217ENST00000509662 C6orf229H3BNL8 230 aa30.13■■■□□ 2.41
ATP2C1-217ENST00000509662 LMOD1P29536 600 aaPredicted RBP30.13■■■□□ 2.41
ATP2C1-217ENST00000509662 WASHC4Q2M389 1173 aa30.13■■■□□ 2.41
ATP2C1-217ENST00000509662 CHADLQ6NUI6 762 aa30.13■■■□□ 2.41
ATP2C1-217ENST00000509662 PNMA8AQ86V59 439 aaPredicted RBP30.13■■■□□ 2.41
ATP2C1-217ENST00000509662 ANKRD18AQ8IVF6 992 aa30.13■■■□□ 2.41
ATP2C1-217ENST00000509662 TTLL11Q8NHH1 800 aa30.13■■■□□ 2.41
ATP2C1-217ENST00000509662 CDC5LQ99459 802 aaKnown RBP30.13■■■□□ 2.41
ATP2C1-217ENST00000509662 EPHX2P34913 555 aa30.12■■■□□ 2.41
ATP2C1-217ENST00000509662 GPSM2P81274 684 aa30.12■■■□□ 2.41
ATP2C1-217ENST00000509662 EYA3Q99504 573 aa30.12■■■□□ 2.41
ATP2C1-217ENST00000509662 LRRC37AA6NMS7 1700 aa30.12■■■□□ 2.41
ATP2C1-217ENST00000509662 F6X3S4 739 aa30.11■■■□□ 2.41
ATP2C1-217ENST00000509662 LDHDQ86WU2 507 aa30.11■■■□□ 2.41
ATP2C1-217ENST00000509662 SMC4Q9NTJ3 1288 aa30.11■■■□□ 2.41
ATP2C1-217ENST00000509662 EAPPQ56P03 285 aaPredicted RBP30.1■■■□□ 2.41
ATP2C1-217ENST00000509662 ANKIB1Q9P2G1 1089 aa30.1■■■□□ 2.41
ATP2C1-217ENST00000509662 RARSP54136 660 aaKnown RBP30.09■■■□□ 2.41
ATP2C1-217ENST00000509662 CXCL9Q07325 125 aa30.09■■■□□ 2.41
ATP2C1-217ENST00000509662 TNIP1Q15025 636 aa30.09■■■□□ 2.41
ATP2C1-217ENST00000509662 PLA2G12BQ9BX93 195 aa30.09■■■□□ 2.41
ATP2C1-217ENST00000509662 PODXL2Q9NZ53 605 aa30.09■■■□□ 2.41
ATP2C1-217ENST00000509662 CLEC11AQ9Y240 323 aa30.09■■■□□ 2.41
ATP2C1-217ENST00000509662 PTPRCP08575 1304 aa30.08■■■□□ 2.41
ATP2C1-217ENST00000509662 POTEIP0CG38 1075 aa30.08■■■□□ 2.41
ATP2C1-217ENST00000509662 POTEJP0CG39 1038 aa30.08■■■□□ 2.41
ATP2C1-217ENST00000509662 BEND3Q5T5X7 828 aa30.08■■■□□ 2.41
ATP2C1-217ENST00000509662 POLLQ9UGP5 575 aa30.08■■■□□ 2.41
ATP2C1-217ENST00000509662 RTL9Q8NET4 1388 aa30.07■■■□□ 2.4
ATP2C1-217ENST00000509662 BRPF1P55201 1214 aaPredicted RBP30.07■■■□□ 2.4
ATP2C1-217ENST00000509662 CIAPIN1Q6FI81 312 aa30.07■■■□□ 2.4
ATP2C1-217ENST00000509662 TBC1D16Q8TBP0 767 aa30.07■■■□□ 2.4
ATP2C1-217ENST00000509662 ZC3H12CQ9C0D7 883 aaKnown RBP30.07■■■□□ 2.4
ATP2C1-217ENST00000509662 GREM2Q9H772 168 aa30.07■■■□□ 2.4
ATP2C1-217ENST00000509662 CEP350Q5VT06 3117 aa30.07■■■□□ 2.4
ATP2C1-217ENST00000509662 MYH3P11055 1940 aa30.06■■■□□ 2.4
ATP2C1-217ENST00000509662 RIMBP2O15034 1052 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms