RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 IL16Q14005 1332 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 YDJCA8MPS7 323 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
SDHA-210ENST00000509420 PPIP5K2O43314 1243 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 IGKV5-2P06315 115 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 EPS15P42566 896 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 KIAA2012Q0VF49 1180 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
SDHA-210ENST00000509420 G2E3Q7L622 706 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
SDHA-210ENST00000509420 JDP2Q8WYK2 163 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 MYD88Q99836 296 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 VPS33BQ9H267 617 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 MRS2Q9HD23 443 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
SDHA-210ENST00000509420 SCN9AQ15858 1988 aa17.27■□□□□ 0.36
SDHA-210ENST00000509420 CXCL9Q07325 125 aa17.26■□□□□ 0.35
SDHA-210ENST00000509420 METTL22Q9BUU2 404 aaPredicted RBP17.26■□□□□ 0.35
SDHA-210ENST00000509420 CREBZFQ9NS37 354 aa17.26■□□□□ 0.35
SDHA-210ENST00000509420 FANCIQ9NVI1 1328 aa17.25■□□□□ 0.35
SDHA-210ENST00000509420 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
SDHA-210ENST00000509420 DPP8Q6V1X1 898 aaPredicted RBP17.25■□□□□ 0.35
SDHA-210ENST00000509420 RIC3Q7Z5B4 369 aa17.25■□□□□ 0.35
SDHA-210ENST00000509420 MPNDQ8N594 471 aa17.25■□□□□ 0.35
SDHA-210ENST00000509420 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
SDHA-210ENST00000509420 SEC31BQ9NQW1 1179 aa17.25■□□□□ 0.35
SDHA-210ENST00000509420 GJA3Q9Y6H8 435 aa17.25■□□□□ 0.35
SDHA-210ENST00000509420 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
SDHA-210ENST00000509420 MYH3P11055 1940 aa17.24■□□□□ 0.35
SDHA-210ENST00000509420 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
SDHA-210ENST00000509420 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
SDHA-210ENST00000509420 GPSM2P81274 684 aa17.24■□□□□ 0.35
SDHA-210ENST00000509420 EAPPQ56P03 285 aaPredicted RBP17.24■□□□□ 0.35
SDHA-210ENST00000509420 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
SDHA-210ENST00000509420 MAP1SQ66K74 1059 aaPredicted RBP17.24■□□□□ 0.35
SDHA-210ENST00000509420 NIM1KQ8IY84 436 aa17.24■□□□□ 0.35
SDHA-210ENST00000509420 CCDC191Q8NCU4 936 aa17.24■□□□□ 0.35
SDHA-210ENST00000509420 POLLQ9UGP5 575 aa17.24■□□□□ 0.35
SDHA-210ENST00000509420 ZNRF3Q9ULT6 936 aa17.24■□□□□ 0.35
SDHA-210ENST00000509420 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.353e-12■■■■□ 23.7
SDHA-210ENST00000509420 TMC4Q7Z404 712 aa17.23■□□□□ 0.35
SDHA-210ENST00000509420 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
SDHA-210ENST00000509420 CACNA1FO60840 1977 aa17.22■□□□□ 0.35
SDHA-210ENST00000509420 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
SDHA-210ENST00000509420 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
SDHA-210ENST00000509420 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
SDHA-210ENST00000509420 IFFO2Q5TF58 517 aa17.22■□□□□ 0.35
SDHA-210ENST00000509420 KSR2Q6VAB6 950 aa17.22■□□□□ 0.35
SDHA-210ENST00000509420 PNMA8AQ86V59 439 aaPredicted RBP17.22■□□□□ 0.35
SDHA-210ENST00000509420 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
SDHA-210ENST00000509420 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
SDHA-210ENST00000509420 CNTNAP1P78357 1384 aa17.22■□□□□ 0.35
SDHA-210ENST00000509420 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.35
SDHA-210ENST00000509420 SPEF2Q9C093 1822 aa17.21■□□□□ 0.35
SDHA-210ENST00000509420 RTL9Q8NET4 1388 aa17.21■□□□□ 0.35
SDHA-210ENST00000509420 GMPSP49915 693 aaPredicted RBP17.21■□□□□ 0.35
SDHA-210ENST00000509420 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
SDHA-210ENST00000509420 SUPT20HQ8NEM7 779 aa17.21■□□□□ 0.35
SDHA-210ENST00000509420 GPR101Q96P66 508 aaPredicted RBP17.21■□□□□ 0.35
SDHA-210ENST00000509420 CWC25Q9NXE8 425 aaPredicted RBP17.21■□□□□ 0.35
SDHA-210ENST00000509420 PSME4Q14997 1843 aa17.21■□□□□ 0.35
SDHA-210ENST00000509420 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
SDHA-210ENST00000509420 ANP32CO43423 234 aa17.2■□□□□ 0.34
SDHA-210ENST00000509420 VAMP4O75379 141 aa17.2■□□□□ 0.34
SDHA-210ENST00000509420 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
SDHA-210ENST00000509420 CASP7P55210 303 aa17.2■□□□□ 0.34
SDHA-210ENST00000509420 CWF19L2Q2TBE0 894 aaKnown RBP17.2■□□□□ 0.34
SDHA-210ENST00000509420 KCNQ5Q9NR82 932 aa17.2■□□□□ 0.34
SDHA-210ENST00000509420 TRPM7Q96QT4 1865 aa17.2■□□□□ 0.34
SDHA-210ENST00000509420 ZNF521Q96K83 1311 aa17.2■□□□□ 0.34
SDHA-210ENST00000509420 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
SDHA-210ENST00000509420 NEURL1BA8MQ27 555 aa17.19■□□□□ 0.34
SDHA-210ENST00000509420 RAD17O75943 681 aa17.19■□□□□ 0.34
SDHA-210ENST00000509420 RPS8P62241 208 aaKnown RBP17.19■□□□□ 0.34
SDHA-210ENST00000509420 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
SDHA-210ENST00000509420 TBC1D16Q8TBP0 767 aa17.19■□□□□ 0.34
SDHA-210ENST00000509420 PODXL2Q9NZ53 605 aa17.19■□□□□ 0.34
SDHA-210ENST00000509420 MKRN1Q9UHC7 482 aaKnown RBP17.19■□□□□ 0.34
SDHA-210ENST00000509420 PDE8AO60658 829 aa17.18■□□□□ 0.34
SDHA-210ENST00000509420 COL13A1Q5TAT6 717 aaPredicted RBP17.18■□□□□ 0.34
SDHA-210ENST00000509420 USP50Q70EL3 339 aaPredicted RBP17.18■□□□□ 0.34
SDHA-210ENST00000509420 PGAP2Q9UHJ9 254 aa17.18■□□□□ 0.34
SDHA-210ENST00000509420 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
SDHA-210ENST00000509420 TMEM88BA6NKF7 163 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 H7C1W4 665 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 EXOSC9Q06265 439 aaKnown RBP17.17■□□□□ 0.34
SDHA-210ENST00000509420 FLIIQ13045 1269 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 TTLL11Q8NHH1 800 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 TRPM4Q8TD43 1214 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
SDHA-210ENST00000509420 DBNDD1Q9H9R9 158 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 CLEC11AQ9Y240 323 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
SDHA-210ENST00000509420 A0A1B0GUL6 1792 aa17.17■□□□□ 0.34
SDHA-210ENST00000509420 TRAF5O00463 557 aa17.16■□□□□ 0.34
SDHA-210ENST00000509420 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
SDHA-210ENST00000509420 EGFRP00533 1210 aa17.16■□□□□ 0.34
SDHA-210ENST00000509420 HSPA1AP0DMV8 641 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms