RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 CCDC152Q4G0S7 254 aa25.52■■□□□ 1.68
HOXC6-204ENST00000509328 GRAPLQ8TC17 118 aaPredicted RBP25.52■■□□□ 1.68
HOXC6-204ENST00000509328 PLA2G12BQ9BX93 195 aa25.52■■□□□ 1.68
HOXC6-204ENST00000509328 C9orf78Q9NZ63 289 aaPredicted RBP25.52■■□□□ 1.68
HOXC6-204ENST00000509328 PPEF1O14829 653 aaPredicted RBP25.51■■□□□ 1.67
HOXC6-204ENST00000509328 BBOX1O75936 387 aa25.51■■□□□ 1.67
HOXC6-204ENST00000509328 CTSWP56202 376 aa25.51■■□□□ 1.67
HOXC6-204ENST00000509328 CCDC93Q567U6 631 aa25.51■■□□□ 1.67
HOXC6-204ENST00000509328 YTHDC1Q96MU7 727 aaKnown RBP25.51■■□□□ 1.67
HOXC6-204ENST00000509328 CCT4P50991 539 aaKnown RBP25.5■■□□□ 1.67
HOXC6-204ENST00000509328 CC2D2BQ6DHV5 1058 aa25.5■■□□□ 1.67
HOXC6-204ENST00000509328 NFKBIEO00221 500 aa25.49■■□□□ 1.67
HOXC6-204ENST00000509328 YY1P25490 414 aa25.49■■□□□ 1.67
HOXC6-204ENST00000509328 TTLL11Q8NHH1 800 aa25.49■■□□□ 1.67
HOXC6-204ENST00000509328 FRAT1Q92837 279 aaPredicted RBP25.49■■□□□ 1.67
HOXC6-204ENST00000509328 UTYO14607 1347 aa25.48■■□□□ 1.67
HOXC6-204ENST00000509328 DICER1Q9UPY3 1922 aaKnown RBP25.48■■□□□ 1.67
HOXC6-204ENST00000509328 OLFM4Q6UX06 510 aa25.48■■□□□ 1.67
HOXC6-204ENST00000509328 TMC4Q7Z404 712 aa25.48■■□□□ 1.67
HOXC6-204ENST00000509328 RTKN2Q8IZC4 609 aa25.48■■□□□ 1.67
HOXC6-204ENST00000509328 ATP6V0A2Q9Y487 856 aa25.48■■□□□ 1.67
HOXC6-204ENST00000509328 LTBP3Q9NS15 1303 aa25.47■■□□□ 1.67
HOXC6-204ENST00000509328 LRRC37AA6NMS7 1700 aa25.47■■□□□ 1.67
HOXC6-204ENST00000509328 RASSF7Q02833 373 aa25.47■■□□□ 1.67
HOXC6-204ENST00000509328 GRIPAP1Q4V328 841 aa25.47■■□□□ 1.67
HOXC6-204ENST00000509328 ATF7IPQ6VMQ6 1270 aa25.47■■□□□ 1.67
HOXC6-204ENST00000509328 TMX4Q9H1E5 349 aaPredicted RBP25.47■■□□□ 1.67
HOXC6-204ENST00000509328 RTL9Q8NET4 1388 aa25.46■■□□□ 1.67
HOXC6-204ENST00000509328 COL4A1P02462 1669 aa25.46■■□□□ 1.67
HOXC6-204ENST00000509328 TRIM27P14373 513 aa25.46■■□□□ 1.67
HOXC6-204ENST00000509328 ZKSCAN2Q63HK3 967 aa25.46■■□□□ 1.67
HOXC6-204ENST00000509328 CELF1Q92879 486 aaKnown RBP25.46■■□□□ 1.67
HOXC6-204ENST00000509328 CCDC85AQ96PX6 553 aaPredicted RBP25.46■■□□□ 1.67
HOXC6-204ENST00000509328 TAOK3Q9H2K8 898 aa25.46■■□□□ 1.67
HOXC6-204ENST00000509328 SEC31BQ9NQW1 1179 aa25.46■■□□□ 1.67
HOXC6-204ENST00000509328 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
HOXC6-204ENST00000509328 SPEF2Q9C093 1822 aa25.45■■□□□ 1.66
HOXC6-204ENST00000509328 CSF1RP07333 972 aa25.45■■□□□ 1.66
HOXC6-204ENST00000509328 NBPF7P0C2Y1 421 aaPredicted RBP25.45■■□□□ 1.66
HOXC6-204ENST00000509328 RPS8P62241 208 aaKnown RBP25.45■■□□□ 1.66
HOXC6-204ENST00000509328 SP8Q8IXZ3 490 aa25.45■■□□□ 1.66
HOXC6-204ENST00000509328 LMNB1P20700 586 aa25.44■■□□□ 1.66
HOXC6-204ENST00000509328 FOXO4P98177 505 aa25.44■■□□□ 1.66
HOXC6-204ENST00000509328 C9orf131Q5VYM1 1079 aa25.44■■□□□ 1.66
HOXC6-204ENST00000509328 GREM2Q9H772 168 aa25.44■■□□□ 1.66
HOXC6-204ENST00000509328 FKBP4Q02790 459 aaKnown RBP eCLIP25.43■■□□□ 1.66
HOXC6-204ENST00000509328 INTS3Q68E01 1043 aaKnown RBP25.43■■□□□ 1.66
HOXC6-204ENST00000509328 USP44Q9H0E7 712 aa25.43■■□□□ 1.66
HOXC6-204ENST00000509328 CDC5LQ99459 802 aaKnown RBP25.42■■□□□ 1.66
HOXC6-204ENST00000509328 RNF181Q9P0P0 153 aa25.42■■□□□ 1.66
HOXC6-204ENST00000509328 RCAN3Q9UKA8 241 aa25.42■■□□□ 1.66
HOXC6-204ENST00000509328 TIAM2Q8IVF5 1701 aa25.41■■□□□ 1.66
HOXC6-204ENST00000509328 PRELPP51888 382 aa25.41■■□□□ 1.66
HOXC6-204ENST00000509328 SLC51AQ86UW1 340 aa25.41■■□□□ 1.66
HOXC6-204ENST00000509328 ANKRD18AQ8IVF6 992 aa25.41■■□□□ 1.66
HOXC6-204ENST00000509328 SUCLG2Q96I99 432 aa25.41■■□□□ 1.66
HOXC6-204ENST00000509328 PSMD1Q99460 953 aa25.41■■□□□ 1.66
HOXC6-204ENST00000509328 FAM161AQ3B820 660 aa25.4■■□□□ 1.66
HOXC6-204ENST00000509328 EPHA10Q5JZY3 1008 aa25.4■■□□□ 1.66
HOXC6-204ENST00000509328 TNNQ9UQP3 1299 aa25.4■■□□□ 1.66
HOXC6-204ENST00000509328 ITGA6P23229 1130 aa25.39■■□□□ 1.66
HOXC6-204ENST00000509328 LMBR1LQ6UX01 489 aa25.39■■□□□ 1.66
HOXC6-204ENST00000509328 CLUAP1Q96AJ1 413 aa25.39■■□□□ 1.66
HOXC6-204ENST00000509328 KAZALD1Q96I82 304 aa25.39■■□□□ 1.66
HOXC6-204ENST00000509328 MPNDQ8N594 471 aa25.38■■□□□ 1.65
HOXC6-204ENST00000509328 ANKRD18BA2A2Z9 1011 aa25.37■■□□□ 1.65
HOXC6-204ENST00000509328 DPP8Q6V1X1 898 aaPredicted RBP25.37■■□□□ 1.65
HOXC6-204ENST00000509328 CHMP3Q9Y3E7 222 aa25.37■■□□□ 1.65
HOXC6-204ENST00000509328 LTBP1Q14766 1721 aa25.37■■□□□ 1.65
HOXC6-204ENST00000509328 UBTFL1P0CB47 393 aaPredicted RBP25.36■■□□□ 1.65
HOXC6-204ENST00000509328 IFIT5Q13325 482 aaKnown RBP25.36■■□□□ 1.65
HOXC6-204ENST00000509328 FTSJ3Q8IY81 847 aaKnown RBP25.36■■□□□ 1.65
HOXC6-204ENST00000509328 SUPT20HQ8NEM7 779 aa25.36■■□□□ 1.65
HOXC6-204ENST00000509328 ZNF277Q9NRM2 450 aaPredicted RBP25.36■■□□□ 1.65
HOXC6-204ENST00000509328 HDAC5Q9UQL6 1122 aa25.36■■□□□ 1.65
HOXC6-204ENST00000509328 ZC3H4Q9UPT8 1303 aaKnown RBP25.36■■□□□ 1.65
HOXC6-204ENST00000509328 IGHMBP2P38935 993 aaKnown RBP25.35■■□□□ 1.65
HOXC6-204ENST00000509328 RABL6Q3YEC7 729 aaPredicted RBP25.35■■□□□ 1.65
HOXC6-204ENST00000509328 DZIP1LQ8IYY4 767 aaKnown RBP25.35■■□□□ 1.65
HOXC6-204ENST00000509328 RTFDC1Q9BY42 306 aaPredicted RBP25.35■■□□□ 1.65
HOXC6-204ENST00000509328 BICC1Q9H694 974 aaKnown RBP25.35■■□□□ 1.65
HOXC6-204ENST00000509328 BSDC1Q9NW68 430 aaPredicted RBP25.35■■□□□ 1.65
HOXC6-204ENST00000509328 IARSP41252 1262 aaKnown RBP25.34■■□□□ 1.65
HOXC6-204ENST00000509328 CCDC57Q2TAC2 916 aa25.34■■□□□ 1.65
HOXC6-204ENST00000509328 TMEM57Q8N5G2 664 aa25.34■■□□□ 1.65
HOXC6-204ENST00000509328 DUOX1Q9NRD9 1551 aa25.34■■□□□ 1.65
HOXC6-204ENST00000509328 GPSM2P81274 684 aa25.33■■□□□ 1.65
HOXC6-204ENST00000509328 ANKRD44Q8N8A2 993 aa25.33■■□□□ 1.65
HOXC6-204ENST00000509328 MEIS3Q99687 375 aa25.33■■□□□ 1.65
HOXC6-204ENST00000509328 VPS33BQ9H267 617 aa25.33■■□□□ 1.65
HOXC6-204ENST00000509328 NSFL1CQ9UNZ2 370 aaKnown RBP25.33■■□□□ 1.65
HOXC6-204ENST00000509328 GNAI3P08754 354 aa25.32■■□□□ 1.64
HOXC6-204ENST00000509328 MS4A1P11836 297 aa25.32■■□□□ 1.64
HOXC6-204ENST00000509328 MPHOSPH8Q99549 860 aa25.32■■□□□ 1.64
HOXC6-204ENST00000509328 PODXL2Q9NZ53 605 aa25.31■■□□□ 1.64
HOXC6-204ENST00000509328 RLBP1P12271 317 aa25.3■■□□□ 1.64
HOXC6-204ENST00000509328 TAF7LQ5H9L4 462 aa25.3■■□□□ 1.64
HOXC6-204ENST00000509328 ZNF784Q8NCA9 323 aaPredicted RBP25.3■■□□□ 1.64
HOXC6-204ENST00000509328 ANKIB1Q9P2G1 1089 aa25.3■■□□□ 1.64
HOXC6-204ENST00000509328 MINPP1Q9UNW1 487 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms