RNA–Protein interactions for RNA: ENST00000509208.1

COPG1-204, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 472 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-204ENST00000509208 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
COPG1-204ENST00000509208 PDE8AO60658 829 aa13.18□□□□□ -0.3
COPG1-204ENST00000509208 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
COPG1-204ENST00000509208 GPR162Q16538 588 aa13.18□□□□□ -0.3
COPG1-204ENST00000509208 INTS3Q68E01 1043 aaKnown RBP13.18□□□□□ -0.3
COPG1-204ENST00000509208 CNKSR1Q969H4 720 aa13.18□□□□□ -0.3
COPG1-204ENST00000509208 USP44Q9H0E7 712 aa13.18□□□□□ -0.3
COPG1-204ENST00000509208 SBF1O95248 1867 aa13.18□□□□□ -0.3
COPG1-204ENST00000509208 RTL9Q8NET4 1388 aa13.18□□□□□ -0.3
COPG1-204ENST00000509208 A0A1B0GUL6 1792 aa13.17□□□□□ -0.3
COPG1-204ENST00000509208 HSP90B1P14625 803 aaKnown RBP13.17□□□□□ -0.3
COPG1-204ENST00000509208 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
COPG1-204ENST00000509208 TMEM57Q8N5G2 664 aa13.17□□□□□ -0.3
COPG1-204ENST00000509208 KAZALD1Q96I82 304 aa13.17□□□□□ -0.3
COPG1-204ENST00000509208 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
COPG1-204ENST00000509208 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
COPG1-204ENST00000509208 FOXO4P98177 505 aa13.16□□□□□ -0.3
COPG1-204ENST00000509208 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
COPG1-204ENST00000509208 C7orf43Q8WVR3 580 aa13.16□□□□□ -0.3
COPG1-204ENST00000509208 RBM17Q96I25 401 aaKnown RBP13.16□□□□□ -0.3
COPG1-204ENST00000509208 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
COPG1-204ENST00000509208 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
COPG1-204ENST00000509208 MEIS3Q99687 375 aa13.16□□□□□ -0.3
COPG1-204ENST00000509208 GREM2Q9H772 168 aa13.16□□□□□ -0.3
COPG1-204ENST00000509208 CCDC88AQ3V6T2 1871 aa13.16□□□□□ -0.3
COPG1-204ENST00000509208 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
COPG1-204ENST00000509208 PLIN1O60240 522 aa13.15□□□□□ -0.3
COPG1-204ENST00000509208 GRAPQ13588 217 aa13.15□□□□□ -0.3
COPG1-204ENST00000509208 CCDC152Q4G0S7 254 aa13.15□□□□□ -0.3
COPG1-204ENST00000509208 OLFM4Q6UX06 510 aa13.15□□□□□ -0.3
COPG1-204ENST00000509208 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
COPG1-204ENST00000509208 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
COPG1-204ENST00000509208 TTLL11Q8NHH1 800 aa13.15□□□□□ -0.3
COPG1-204ENST00000509208 GRAPLQ8TC17 118 aaPredicted RBP13.15□□□□□ -0.3
COPG1-204ENST00000509208 PANK1Q8TE04 598 aa13.15□□□□□ -0.3
COPG1-204ENST00000509208 TIAM2Q8IVF5 1701 aa13.14□□□□□ -0.31
COPG1-204ENST00000509208 PPEF1O14829 653 aaPredicted RBP13.14□□□□□ -0.31
COPG1-204ENST00000509208 C21orf2O43822 256 aa13.14□□□□□ -0.31
COPG1-204ENST00000509208 ALDH1B1P30837 517 aa13.14□□□□□ -0.31
COPG1-204ENST00000509208 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
COPG1-204ENST00000509208 ANKRD44Q8N8A2 993 aa13.14□□□□□ -0.31
COPG1-204ENST00000509208 CELF1Q92879 486 aaKnown RBP13.14□□□□□ -0.31
COPG1-204ENST00000509208 SEC31BQ9NQW1 1179 aa13.14□□□□□ -0.31
COPG1-204ENST00000509208 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
COPG1-204ENST00000509208 CSF1RP07333 972 aa13.13□□□□□ -0.31
COPG1-204ENST00000509208 RABL6Q3YEC7 729 aaPredicted RBP13.13□□□□□ -0.31
COPG1-204ENST00000509208 BICC1Q9H694 974 aaKnown RBP13.13□□□□□ -0.31
COPG1-204ENST00000509208 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
COPG1-204ENST00000509208 NFKBIEO00221 500 aa13.12□□□□□ -0.31
COPG1-204ENST00000509208 GRIN3BO60391 1043 aa13.12□□□□□ -0.31
COPG1-204ENST00000509208 UBTFL1P0CB47 393 aaPredicted RBP13.12□□□□□ -0.31
COPG1-204ENST00000509208 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
COPG1-204ENST00000509208 LMBR1LQ6UX01 489 aa13.12□□□□□ -0.31
COPG1-204ENST00000509208 ITPRIPQ8IWB1 547 aa13.12□□□□□ -0.31
COPG1-204ENST00000509208 ATP6V0A2Q9Y487 856 aa13.12□□□□□ -0.31
COPG1-204ENST00000509208 LRRFIP2Q9Y608 721 aaKnown RBP13.12□□□□□ -0.31
COPG1-204ENST00000509208 ITGA6P23229 1130 aa13.11□□□□□ -0.31
COPG1-204ENST00000509208 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
COPG1-204ENST00000509208 RASSF7Q02833 373 aa13.11□□□□□ -0.31
COPG1-204ENST00000509208 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
COPG1-204ENST00000509208 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
COPG1-204ENST00000509208 BBOX1O75936 387 aa13.1□□□□□ -0.31
COPG1-204ENST00000509208 PRELPP51888 382 aa13.1□□□□□ -0.31
COPG1-204ENST00000509208 RPS8P62241 208 aaKnown RBP13.1□□□□□ -0.31
COPG1-204ENST00000509208 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
COPG1-204ENST00000509208 ARHGAP27Q6ZUM4 889 aa13.1□□□□□ -0.31
COPG1-204ENST00000509208 CDC5LQ99459 802 aaKnown RBP13.1□□□□□ -0.31
COPG1-204ENST00000509208 CHMP3Q9Y3E7 222 aa13.1□□□□□ -0.31
COPG1-204ENST00000509208 LTBP3Q9NS15 1303 aa13.1□□□□□ -0.31
COPG1-204ENST00000509208 COL4A5P29400 1685 aa13.09□□□□□ -0.31
COPG1-204ENST00000509208 GNAI3P08754 354 aa13.09□□□□□ -0.31
COPG1-204ENST00000509208 MS4A1P11836 297 aa13.09□□□□□ -0.31
COPG1-204ENST00000509208 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
COPG1-204ENST00000509208 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
COPG1-204ENST00000509208 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
COPG1-204ENST00000509208 ANKRD18AQ8IVF6 992 aa13.09□□□□□ -0.31
COPG1-204ENST00000509208 TAOK3Q9H2K8 898 aa13.09□□□□□ -0.31
COPG1-204ENST00000509208 IFIT5Q13325 482 aaKnown RBP13.08□□□□□ -0.32
COPG1-204ENST00000509208 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
COPG1-204ENST00000509208 SP8Q8IXZ3 490 aa13.08□□□□□ -0.32
COPG1-204ENST00000509208 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.08□□□□□ -0.32
COPG1-204ENST00000509208 COG6Q9Y2V7 657 aa13.08□□□□□ -0.32
COPG1-204ENST00000509208 ANKRD18BA2A2Z9 1011 aa13.07□□□□□ -0.32
COPG1-204ENST00000509208 ZBTB7BO15156 539 aaPredicted RBP13.07□□□□□ -0.32
COPG1-204ENST00000509208 RTKN2Q8IZC4 609 aa13.07□□□□□ -0.32
COPG1-204ENST00000509208 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
COPG1-204ENST00000509208 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
COPG1-204ENST00000509208 GNAI2P04899 355 aa13.06□□□□□ -0.32
COPG1-204ENST00000509208 RFX5P48382 616 aaPredicted RBP13.06□□□□□ -0.32
COPG1-204ENST00000509208 GPSM2P81274 684 aa13.06□□□□□ -0.32
COPG1-204ENST00000509208 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
COPG1-204ENST00000509208 MTX1Q13505 466 aa13.06□□□□□ -0.32
COPG1-204ENST00000509208 CCDC57Q2TAC2 916 aa13.06□□□□□ -0.32
COPG1-204ENST00000509208 PSMD1Q99460 953 aa13.06□□□□□ -0.32
COPG1-204ENST00000509208 BSDC1Q9NW68 430 aaPredicted RBP13.06□□□□□ -0.32
COPG1-204ENST00000509208 LMNB1P20700 586 aa13.05□□□□□ -0.32
COPG1-204ENST00000509208 IGHMBP2P38935 993 aaKnown RBP13.05□□□□□ -0.32
COPG1-204ENST00000509208 RTFDC1Q9BY42 306 aaPredicted RBP13.05□□□□□ -0.32
COPG1-204ENST00000509208 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
COPG1-204ENST00000509208 DDX19BQ9UMR2 479 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms