RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
HTT-205ENST00000509043 RREB1Q92766 1687 aa11.11□□□□□ -0.63
HTT-205ENST00000509043 ANKRD36CQ5JPF3 1778 aa11.11□□□□□ -0.63
HTT-205ENST00000509043 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
HTT-205ENST00000509043 IFIT5Q13325 482 aaKnown RBP11.11□□□□□ -0.63
HTT-205ENST00000509043 NECTIN1Q15223 517 aa11.11□□□□□ -0.63
HTT-205ENST00000509043 ANKRD1Q15327 319 aa11.11□□□□□ -0.63
HTT-205ENST00000509043 VPS53Q5VIR6 699 aa11.11□□□□□ -0.63
HTT-205ENST00000509043 NLRP10Q86W26 655 aa11.11□□□□□ -0.63
HTT-205ENST00000509043 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
HTT-205ENST00000509043 SH2B1Q9NRF2 756 aaPredicted RBP11.11□□□□□ -0.63
HTT-205ENST00000509043 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
HTT-205ENST00000509043 TRAK2O60296 914 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 ADAMTS2O95450 1211 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 EIF5P55010 431 aaKnown RBP11.1□□□□□ -0.63
HTT-205ENST00000509043 NMIQ13287 307 aaPredicted RBP11.1□□□□□ -0.63
HTT-205ENST00000509043 VPS72Q15906 364 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 PARP10Q53GL7 1025 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 L1TD1Q5T7N2 865 aaKnown RBP11.1□□□□□ -0.63
HTT-205ENST00000509043 USPL1Q5W0Q7 1092 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 KBTBD3Q8NAB2 608 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 TTC14Q96N46 770 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 IL25Q9H293 177 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 HELLSQ9NRZ9 838 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 CCDC87Q9NVE4 849 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 LIMCH1Q9UPQ0 1083 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.1□□□□□ -0.63
HTT-205ENST00000509043 CYP46A1Q9Y6A2 500 aa11.1□□□□□ -0.63
HTT-205ENST00000509043 SH3TC1Q8TE82 1336 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 PDE8AO60658 829 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 ZFYP08048 801 aaPredicted RBP11.09□□□□□ -0.63
HTT-205ENST00000509043 KCNJ4P48050 445 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 MCMDC2Q4G0Z9 681 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 CCDC158Q5M9N0 1113 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 DZIP3Q86Y13 1208 aaKnown RBP11.09□□□□□ -0.63
HTT-205ENST00000509043 ZNF34Q8IZ26 560 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
HTT-205ENST00000509043 SYTL4Q96C24 671 aaPredicted RBP11.09□□□□□ -0.63
HTT-205ENST00000509043 SLC4A9Q96Q91 983 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 DBNDD2Q9BQY9 259 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 ZBTB1Q9Y2K1 713 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
HTT-205ENST00000509043 RBM8AQ9Y5S9 174 aaKnown RBP11.09□□□□□ -0.63
HTT-205ENST00000509043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.09□□□□□ -0.63
HTT-205ENST00000509043 U3KPZ7 1027 aaPredicted RBP11.09□□□□□ -0.63
HTT-205ENST00000509043 SPATA31A6Q5VVP1 1343 aa11.09□□□□□ -0.63
HTT-205ENST00000509043 RPAP1Q9BWH6 1393 aaPredicted RBP11.08□□□□□ -0.64
HTT-205ENST00000509043 LOC102724428A0A0B4J2F2 783 aa11.08□□□□□ -0.64
HTT-205ENST00000509043 ANKRD18BA2A2Z9 1011 aa11.08□□□□□ -0.64
HTT-205ENST00000509043 BAG4O95429 457 aaKnown RBP11.08□□□□□ -0.64
HTT-205ENST00000509043 CTSWP56202 376 aa11.08□□□□□ -0.64
HTT-205ENST00000509043 SIK1P57059 783 aa11.08□□□□□ -0.64
HTT-205ENST00000509043 CREB3L3Q68CJ9 461 aa11.08□□□□□ -0.64
HTT-205ENST00000509043 MARCH10Q8NA82 808 aaPredicted RBP11.08□□□□□ -0.64
HTT-205ENST00000509043 ZNF512BQ96KM6 892 aaPredicted RBP11.08□□□□□ -0.64
HTT-205ENST00000509043 PAG1Q9NWQ8 432 aa11.08□□□□□ -0.64
HTT-205ENST00000509043 RTL9Q8NET4 1388 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 A0A1B0GUL7 405 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
HTT-205ENST00000509043 CASTP20810 708 aaKnown RBP11.07□□□□□ -0.64
HTT-205ENST00000509043 SSFA2P28290 1259 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 PTH1RQ03431 593 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 PRPF40BQ6NWY9 871 aaKnown RBP11.07□□□□□ -0.64
HTT-205ENST00000509043 CLEC4GQ6UXB4 293 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 PPP4R3CPQ6ZMV5 832 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 RUFY3Q7L099 469 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 TTLL11Q8NHH1 800 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 CHMP4CQ96CF2 233 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 FAM89AQ96GI7 184 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 NEUROD6Q96NK8 337 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 UPF3BQ9BZI7 483 aaKnown RBP11.07□□□□□ -0.64
HTT-205ENST00000509043 FOXD4L1Q9NU39 408 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 PDRG1Q9NUG6 133 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 TRMT112Q9UI30 125 aaKnown RBP11.07□□□□□ -0.64
HTT-205ENST00000509043 ZNF652Q9Y2D9 606 aa11.07□□□□□ -0.64
HTT-205ENST00000509043 WDR33Q9C0J8 1336 aaKnown RBP11.07□□□□□ -0.64
HTT-205ENST00000509043 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.06□□□□□ -0.64
HTT-205ENST00000509043 NUTM2BA6NNL0 878 aaPredicted RBP11.06□□□□□ -0.64
HTT-205ENST00000509043 NUTM2EB1AL46 878 aaPredicted RBP11.06□□□□□ -0.64
HTT-205ENST00000509043 IRS4O14654 1257 aaPredicted RBP11.06□□□□□ -0.64
HTT-205ENST00000509043 SLC27A2O14975 620 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 TAF5LO75529 589 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 BRD1O95696 1058 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 IFIT1P09914 478 aaKnown RBP11.06□□□□□ -0.64
HTT-205ENST00000509043 ATP6V1AP38606 617 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 AK2P54819 239 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 HLFQ16534 295 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 LRRC24Q50LG9 513 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 GORABQ5T7V8 394 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
HTT-205ENST00000509043 NUTM2AQ8IVF1 878 aaPredicted RBP11.06□□□□□ -0.64
HTT-205ENST00000509043 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 FNBP4Q8N3X1 1017 aaPredicted RBP11.06□□□□□ -0.64
HTT-205ENST00000509043 JAKMIP1Q96N16 626 aaKnown RBP11.06□□□□□ -0.64
HTT-205ENST00000509043 DSCC1Q9BVC3 393 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 CCDC9Q9Y3X0 531 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms