RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 CTSWP56202 376 aa16.17■□□□□ 0.18
SPSB4-204ENST00000508828 KCNQ4P56696 695 aa16.17■□□□□ 0.18
SPSB4-204ENST00000508828 C22orf23Q9BZE7 217 aa16.17■□□□□ 0.18
SPSB4-204ENST00000508828 IFIT5Q13325 482 aaKnown RBP16.16■□□□□ 0.18
SPSB4-204ENST00000508828 TNNI3KQ59H18 835 aa16.16■□□□□ 0.18
SPSB4-204ENST00000508828 SLC27A3Q5K4L6 730 aa16.16■□□□□ 0.18
SPSB4-204ENST00000508828 SUSD4Q5VX71 490 aa16.16■□□□□ 0.18
SPSB4-204ENST00000508828 CNTROBQ8N137 903 aa16.16■□□□□ 0.18
SPSB4-204ENST00000508828 RILPL2Q969X0 211 aa16.16■□□□□ 0.18
SPSB4-204ENST00000508828 EAF2Q96CJ1 260 aaPredicted RBP16.16■□□□□ 0.18
SPSB4-204ENST00000508828 GPR108Q9NPR9 543 aa16.16■□□□□ 0.18
SPSB4-204ENST00000508828 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
SPSB4-204ENST00000508828 FPGT-TNNI3KV9GXZ4 949 aa16.16■□□□□ 0.18
SPSB4-204ENST00000508828 TFCP2Q12800 502 aa16.15■□□□□ 0.18
SPSB4-204ENST00000508828 ANKRD18BA2A2Z9 1011 aa16.14■□□□□ 0.17
SPSB4-204ENST00000508828 ZPR1O75312 459 aa16.14■□□□□ 0.17
SPSB4-204ENST00000508828 TRIM37O94972 964 aa16.14■□□□□ 0.17
SPSB4-204ENST00000508828 NTSR2O95665 410 aa16.14■□□□□ 0.17
SPSB4-204ENST00000508828 TTLL11Q8NHH1 800 aa16.14■□□□□ 0.17
SPSB4-204ENST00000508828 CCDC8Q9H0W5 538 aaPredicted RBP16.14■□□□□ 0.17
SPSB4-204ENST00000508828 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
SPSB4-204ENST00000508828 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
SPSB4-204ENST00000508828 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
SPSB4-204ENST00000508828 ZNF609O15014 1411 aa16.13■□□□□ 0.17
SPSB4-204ENST00000508828 LRP5O75197 1615 aa16.13■□□□□ 0.17
SPSB4-204ENST00000508828 ADRA2BP18089 450 aa16.13■□□□□ 0.17
SPSB4-204ENST00000508828 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
SPSB4-204ENST00000508828 ATG9AQ7Z3C6 839 aa16.13■□□□□ 0.17
SPSB4-204ENST00000508828 ZNF594Q96JF6 807 aaPredicted RBP16.13■□□□□ 0.17
SPSB4-204ENST00000508828 FAM177BA6PVY3 158 aa16.12■□□□□ 0.17
SPSB4-204ENST00000508828 REC8O95072 547 aa16.12■□□□□ 0.17
SPSB4-204ENST00000508828 ITGA6P23229 1130 aa16.12■□□□□ 0.17
SPSB4-204ENST00000508828 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
SPSB4-204ENST00000508828 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
SPSB4-204ENST00000508828 CCDC85AQ96PX6 553 aaPredicted RBP16.12■□□□□ 0.17
SPSB4-204ENST00000508828 GREM2Q9H772 168 aa16.12■□□□□ 0.17
SPSB4-204ENST00000508828 CEP126Q9P2H0 1117 aa16.12■□□□□ 0.17
SPSB4-204ENST00000508828 RTL9Q8NET4 1388 aa16.12■□□□□ 0.17
SPSB4-204ENST00000508828 LRRC24Q50LG9 513 aa16.11■□□□□ 0.17
SPSB4-204ENST00000508828 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
SPSB4-204ENST00000508828 NYXQ9GZU5 481 aa16.11■□□□□ 0.17
SPSB4-204ENST00000508828 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
SPSB4-204ENST00000508828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.11■□□□□ 0.17
SPSB4-204ENST00000508828 UBR3Q6ZT12 1888 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 CHMLP26374 656 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 RFC4P35249 363 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 BECN1Q14457 450 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 CCDC152Q4G0S7 254 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 TRAPPC3LQ5T215 181 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 ARHGEF1Q92888 912 aaKnown RBP16.1■□□□□ 0.17
SPSB4-204ENST00000508828 EVI5LQ96CN4 794 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 ESYT1Q9BSJ8 1104 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 BCL2L12Q9HB09 334 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 DAXXQ9UER7 740 aaPredicted RBP16.1■□□□□ 0.17
SPSB4-204ENST00000508828 DBNLQ9UJU6 430 aaKnown RBP16.1■□□□□ 0.17
SPSB4-204ENST00000508828 AKAP2Q9Y2D5 859 aa16.1■□□□□ 0.17
SPSB4-204ENST00000508828 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
SPSB4-204ENST00000508828 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
SPSB4-204ENST00000508828 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
SPSB4-204ENST00000508828 PUS3Q9BZE2 481 aaKnown RBP16.09■□□□□ 0.17
SPSB4-204ENST00000508828 CNNM1Q9NRU3 951 aa16.09■□□□□ 0.17
SPSB4-204ENST00000508828 LRRC4BQ9NT99 713 aa16.09■□□□□ 0.17
SPSB4-204ENST00000508828 SRP68Q9UHB9 627 aaKnown RBP16.09■□□□□ 0.17
SPSB4-204ENST00000508828 RIC1Q4ADV7 1423 aa16.09■□□□□ 0.17
SPSB4-204ENST00000508828 HIP1O00291 1037 aa16.08■□□□□ 0.16
SPSB4-204ENST00000508828 MAP4K4O95819 1239 aaPredicted RBP16.08■□□□□ 0.16
SPSB4-204ENST00000508828 ATP5JP18859 108 aa16.08■□□□□ 0.16
SPSB4-204ENST00000508828 LDHAL6AQ6ZMR3 332 aa16.08■□□□□ 0.16
SPSB4-204ENST00000508828 SETDB2Q96T68 719 aa16.08■□□□□ 0.16
SPSB4-204ENST00000508828 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.16
SPSB4-204ENST00000508828 PHF14O94880 888 aa16.07■□□□□ 0.16
SPSB4-204ENST00000508828 SSFA2P28290 1259 aa16.07■□□□□ 0.16
SPSB4-204ENST00000508828 GTF2E1P29083 439 aaPredicted RBP16.07■□□□□ 0.16
SPSB4-204ENST00000508828 TXNRD1Q16881 649 aa16.07■□□□□ 0.16
SPSB4-204ENST00000508828 METTL24Q5JXM2 366 aa16.07■□□□□ 0.16
SPSB4-204ENST00000508828 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
SPSB4-204ENST00000508828 RUFY2Q8WXA3 655 aa16.07■□□□□ 0.16
SPSB4-204ENST00000508828 NEUROD6Q96NK8 337 aa16.07■□□□□ 0.16
SPSB4-204ENST00000508828 BOLA2Q9H3K6 86 aa16.07■□□□□ 0.16
SPSB4-204ENST00000508828 DIAPH3Q9NSV4 1193 aa16.07■□□□□ 0.16
SPSB4-204ENST00000508828 RGPD3A6NKT7 1758 aaPredicted RBP16.06■□□□□ 0.16
SPSB4-204ENST00000508828 RGPD4Q7Z3J3 1758 aa16.06■□□□□ 0.16
SPSB4-204ENST00000508828 RFX7Q2KHR2 1363 aa16.06■□□□□ 0.16
SPSB4-204ENST00000508828 A0A1B0GUL7 405 aa16.06■□□□□ 0.16
SPSB4-204ENST00000508828 PLSCR1O15162 318 aa16.06■□□□□ 0.16
SPSB4-204ENST00000508828 MSH5O43196 834 aa16.06■□□□□ 0.16
SPSB4-204ENST00000508828 EPB41L2O43491 1005 aaKnown RBP16.06■□□□□ 0.16
SPSB4-204ENST00000508828 ERFEQ4G0M1 354 aa16.06■□□□□ 0.16
SPSB4-204ENST00000508828 SMIM5Q71RC9 77 aa16.06■□□□□ 0.16
SPSB4-204ENST00000508828 RIPOR2Q9Y4F9 1068 aa16.06■□□□□ 0.16
SPSB4-204ENST00000508828 TNS1Q9HBL0 1735 aaKnown RBP16.05■□□□□ 0.16
SPSB4-204ENST00000508828 ABCC12Q96J65 1359 aa16.05■□□□□ 0.16
SPSB4-204ENST00000508828 MROH5Q6ZUA9 1318 aa16.05■□□□□ 0.16
SPSB4-204ENST00000508828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.05■□□□□ 0.16
SPSB4-204ENST00000508828 MCCP23508 829 aa16.05■□□□□ 0.16
SPSB4-204ENST00000508828 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
SPSB4-204ENST00000508828 SLC10A5Q5PT55 438 aa16.05■□□□□ 0.16
SPSB4-204ENST00000508828 NBPF5PQ86XG9 351 aaPredicted RBP16.05■□□□□ 0.16
SPSB4-204ENST00000508828 CDC5LQ99459 802 aaKnown RBP16.05■□□□□ 0.16
SPSB4-204ENST00000508828 USP26Q9BXU7 913 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms