RNA–Protein interactions for RNA: ENST00000508602.5

PTPN20-219, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-219ENST00000508602 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
PTPN20-219ENST00000508602 A0A0C4DFX4 3053 aa13.33□□□□□ -0.27
PTPN20-219ENST00000508602 CEP290O15078 2479 aa13.33□□□□□ -0.28
PTPN20-219ENST00000508602 FAM155AB1AL88 458 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-219ENST00000508602 STK25O00506 426 aa13.33□□□□□ -0.28
PTPN20-219ENST00000508602 TRPA1O75762 1119 aa13.33□□□□□ -0.28
PTPN20-219ENST00000508602 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
PTPN20-219ENST00000508602 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
PTPN20-219ENST00000508602 JDP2Q8WYK2 163 aa13.33□□□□□ -0.28
PTPN20-219ENST00000508602 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
PTPN20-219ENST00000508602 MRC1P22897 1456 aa13.32□□□□□ -0.28
PTPN20-219ENST00000508602 NPR1P16066 1061 aa13.32□□□□□ -0.28
PTPN20-219ENST00000508602 ST5P78524 1137 aa13.32□□□□□ -0.28
PTPN20-219ENST00000508602 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
PTPN20-219ENST00000508602 AKAP4Q5JQC9 854 aa13.32□□□□□ -0.28
PTPN20-219ENST00000508602 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
PTPN20-219ENST00000508602 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
PTPN20-219ENST00000508602 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
PTPN20-219ENST00000508602 NPHP1O15259 732 aa13.31□□□□□ -0.28
PTPN20-219ENST00000508602 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
PTPN20-219ENST00000508602 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
PTPN20-219ENST00000508602 A0A087WZG4 1122 aa13.3□□□□□ -0.28
PTPN20-219ENST00000508602 HUNKP57058 714 aa13.3□□□□□ -0.28
PTPN20-219ENST00000508602 KIF23Q02241 960 aaPredicted RBP13.3□□□□□ -0.28
PTPN20-219ENST00000508602 SETDB2Q96T68 719 aa13.3□□□□□ -0.28
PTPN20-219ENST00000508602 PSMD1Q99460 953 aa13.3□□□□□ -0.28
PTPN20-219ENST00000508602 CARD14Q9BXL6 1004 aa13.3□□□□□ -0.28
PTPN20-219ENST00000508602 SLC52A2Q9HAB3 445 aa13.3□□□□□ -0.28
PTPN20-219ENST00000508602 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
PTPN20-219ENST00000508602 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
PTPN20-219ENST00000508602 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-219ENST00000508602 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
PTPN20-219ENST00000508602 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
PTPN20-219ENST00000508602 GPRC5DQ9NZD1 345 aa13.29□□□□□ -0.28
PTPN20-219ENST00000508602 PKN2Q16513 984 aaKnown RBP13.28□□□□□ -0.28
PTPN20-219ENST00000508602 AEBP1Q8IUX7 1158 aa13.28□□□□□ -0.28
PTPN20-219ENST00000508602 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
PTPN20-219ENST00000508602 CAMTA2O94983 1202 aa13.27□□□□□ -0.29
PTPN20-219ENST00000508602 NEUROD1Q13562 356 aa13.27□□□□□ -0.29
PTPN20-219ENST00000508602 RGMBQ6NW40 437 aa13.27□□□□□ -0.29
PTPN20-219ENST00000508602 DLK2Q6UY11 383 aa13.27□□□□□ -0.29
PTPN20-219ENST00000508602 SLC17A8Q8NDX2 589 aa13.27□□□□□ -0.29
PTPN20-219ENST00000508602 LGR6Q9HBX8 967 aa13.27□□□□□ -0.29
PTPN20-219ENST00000508602 COL6A3P12111 3177 aa13.27□□□□□ -0.29
PTPN20-219ENST00000508602 HIRAP54198 1017 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-219ENST00000508602 CSRNP1Q96S65 589 aa13.26□□□□□ -0.29
PTPN20-219ENST00000508602 MFRPQ9BY79 579 aa13.26□□□□□ -0.29
PTPN20-219ENST00000508602 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-219ENST00000508602 HTTP42858 3142 aa13.25□□□□□ -0.29
PTPN20-219ENST00000508602 VARS2Q5ST30 1063 aaKnown RBP13.25□□□□□ -0.29
PTPN20-219ENST00000508602 CDC37L1Q7L3B6 337 aa13.25□□□□□ -0.29
PTPN20-219ENST00000508602 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
PTPN20-219ENST00000508602 RGL2O15211 777 aa13.24□□□□□ -0.29
PTPN20-219ENST00000508602 STARD3NLO95772 234 aa13.24□□□□□ -0.29
PTPN20-219ENST00000508602 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
PTPN20-219ENST00000508602 LARGE2Q8N3Y3 721 aa13.24□□□□□ -0.29
PTPN20-219ENST00000508602 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
PTPN20-219ENST00000508602 IL6STP40189 918 aaPredicted RBP13.23□□□□□ -0.29
PTPN20-219ENST00000508602 FBXO46Q6PJ61 603 aaPredicted RBP13.23□□□□□ -0.29
PTPN20-219ENST00000508602 SLC51AQ86UW1 340 aa13.23□□□□□ -0.29
PTPN20-219ENST00000508602 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
PTPN20-219ENST00000508602 CENPFP49454 3210 aa13.23□□□□□ -0.29
PTPN20-219ENST00000508602 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
PTPN20-219ENST00000508602 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
PTPN20-219ENST00000508602 ALDH1B1P30837 517 aa13.22□□□□□ -0.29
PTPN20-219ENST00000508602 GMPSP49915 693 aaPredicted RBP13.22□□□□□ -0.29
PTPN20-219ENST00000508602 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
PTPN20-219ENST00000508602 USP48Q86UV5 1035 aa13.22□□□□□ -0.29
PTPN20-219ENST00000508602 TRPM4Q8TD43 1214 aa13.22□□□□□ -0.29
PTPN20-219ENST00000508602 ZNF296Q8WUU4 475 aaPredicted RBP13.22□□□□□ -0.29
PTPN20-219ENST00000508602 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
PTPN20-219ENST00000508602 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.29
PTPN20-219ENST00000508602 SLC10A3P09131 477 aa13.21□□□□□ -0.29
PTPN20-219ENST00000508602 CXCL9Q07325 125 aa13.21□□□□□ -0.29
PTPN20-219ENST00000508602 NIM1KQ8IY84 436 aa13.21□□□□□ -0.29
PTPN20-219ENST00000508602 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-219ENST00000508602 SIPA1L3O60292 1781 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-219ENST00000508602 BRCA2P51587 3418 aa13.21□□□□□ -0.3
PTPN20-219ENST00000508602 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-219ENST00000508602 CC2D2BQ6DHV5 1058 aa13.2□□□□□ -0.3
PTPN20-219ENST00000508602 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
PTPN20-219ENST00000508602 SHTN1A0MZ66 631 aa13.19□□□□□ -0.3
PTPN20-219ENST00000508602 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
PTPN20-219ENST00000508602 HEG1Q9ULI3 1381 aa13.19□□□□□ -0.3
PTPN20-219ENST00000508602 TBC1D8O95759 1140 aa13.18□□□□□ -0.3
PTPN20-219ENST00000508602 A1BGP04217 495 aa13.18□□□□□ -0.3
PTPN20-219ENST00000508602 ARSIQ5FYB1 569 aa13.18□□□□□ -0.3
PTPN20-219ENST00000508602 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
PTPN20-219ENST00000508602 C2orf69Q8N8R5 385 aa13.18□□□□□ -0.3
PTPN20-219ENST00000508602 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-219ENST00000508602 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
PTPN20-219ENST00000508602 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
PTPN20-219ENST00000508602 AOC3Q16853 763 aa13.17□□□□□ -0.3
PTPN20-219ENST00000508602 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
PTPN20-219ENST00000508602 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
PTPN20-219ENST00000508602 RANBP2P49792 3224 aaKnown RBP13.17□□□□□ -0.3
PTPN20-219ENST00000508602 CLEC4GQ6UXB4 293 aa13.16□□□□□ -0.3
PTPN20-219ENST00000508602 ZNRF3Q9ULT6 936 aa13.16□□□□□ -0.3
PTPN20-219ENST00000508602 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
PTPN20-219ENST00000508602 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms