RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
NR1I3-225ENST00000508387 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
NR1I3-225ENST00000508387 METTL22Q9BUU2 404 aaPredicted RBP16.53■□□□□ 0.24
NR1I3-225ENST00000508387 SPEF2Q9C093 1822 aa16.53■□□□□ 0.24
NR1I3-225ENST00000508387 IL16Q14005 1332 aa16.52■□□□□ 0.24
NR1I3-225ENST00000508387 PI4KAP2A4QPH2 592 aa16.52■□□□□ 0.24
NR1I3-225ENST00000508387 IGKV5-2P06315 115 aa16.52■□□□□ 0.24
NR1I3-225ENST00000508387 SF3B3Q15393 1217 aaKnown RBP16.52■□□□□ 0.24
NR1I3-225ENST00000508387 EAPPQ56P03 285 aaPredicted RBP16.52■□□□□ 0.24
NR1I3-225ENST00000508387 CHADLQ6NUI6 762 aa16.52■□□□□ 0.24
NR1I3-225ENST00000508387 DPP8Q6V1X1 898 aaPredicted RBP16.52■□□□□ 0.24
NR1I3-225ENST00000508387 SP8Q8IXZ3 490 aa16.52■□□□□ 0.24
NR1I3-225ENST00000508387 PI4KAP1Q8N8J0 262 aa16.52■□□□□ 0.24
NR1I3-225ENST00000508387 RTFDC1Q9BY42 306 aaPredicted RBP16.52■□□□□ 0.24
NR1I3-225ENST00000508387 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
NR1I3-225ENST00000508387 HACL1Q9UJ83 578 aa16.52■□□□□ 0.24
NR1I3-225ENST00000508387 IQCA1LA6NCM1 817 aa16.51■□□□□ 0.23
NR1I3-225ENST00000508387 BBOX1O75936 387 aa16.51■□□□□ 0.23
NR1I3-225ENST00000508387 SCNN1DP51172 638 aa16.51■□□□□ 0.23
NR1I3-225ENST00000508387 CWF19L2Q2TBE0 894 aaKnown RBP16.51■□□□□ 0.23
NR1I3-225ENST00000508387 NIM1KQ8IY84 436 aa16.51■□□□□ 0.23
NR1I3-225ENST00000508387 GPC2Q8N158 579 aa16.51■□□□□ 0.23
NR1I3-225ENST00000508387 MPNDQ8N594 471 aa16.51■□□□□ 0.23
NR1I3-225ENST00000508387 ZBTB38Q8NAP3 1195 aaPredicted RBP16.51■□□□□ 0.23
NR1I3-225ENST00000508387 GPR101Q96P66 508 aaPredicted RBP16.51■□□□□ 0.23
NR1I3-225ENST00000508387 PCNTO95613 3336 aa16.5■□□□□ 0.23
NR1I3-225ENST00000508387 EPHX2P34913 555 aa16.5■□□□□ 0.23
NR1I3-225ENST00000508387 EIF6P56537 245 aaKnown RBP16.5■□□□□ 0.23
NR1I3-225ENST00000508387 EXOSC9Q06265 439 aaKnown RBP16.5■□□□□ 0.23
NR1I3-225ENST00000508387 KLRG1Q96E93 195 aa16.5■□□□□ 0.23
NR1I3-225ENST00000508387 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
NR1I3-225ENST00000508387 CWC25Q9NXE8 425 aaPredicted RBP16.5■□□□□ 0.23
NR1I3-225ENST00000508387 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
NR1I3-225ENST00000508387 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
NR1I3-225ENST00000508387 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
NR1I3-225ENST00000508387 GPSM2P81274 684 aa16.49■□□□□ 0.23
NR1I3-225ENST00000508387 GRIPAP1Q4V328 841 aa16.49■□□□□ 0.23
NR1I3-225ENST00000508387 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
NR1I3-225ENST00000508387 LDHDQ86WU2 507 aa16.49■□□□□ 0.23
NR1I3-225ENST00000508387 CCDC191Q8NCU4 936 aa16.49■□□□□ 0.23
NR1I3-225ENST00000508387 YDJCA8MPS7 323 aa16.48■□□□□ 0.23
NR1I3-225ENST00000508387 EPS15P42566 896 aa16.48■□□□□ 0.23
NR1I3-225ENST00000508387 CXCL9Q07325 125 aa16.48■□□□□ 0.23
NR1I3-225ENST00000508387 KIAA2012Q0VF49 1180 aa16.48■□□□□ 0.23
NR1I3-225ENST00000508387 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
NR1I3-225ENST00000508387 WDR63Q8IWG1 891 aa16.48■□□□□ 0.23
NR1I3-225ENST00000508387 TMX4Q9H1E5 349 aaPredicted RBP16.48■□□□□ 0.23
NR1I3-225ENST00000508387 MYH3P11055 1940 aa16.48■□□□□ 0.23
NR1I3-225ENST00000508387 PASKQ96RG2 1323 aa16.47■□□□□ 0.23
NR1I3-225ENST00000508387 VAMP4O75379 141 aa16.47■□□□□ 0.23
NR1I3-225ENST00000508387 FLIIQ13045 1269 aa16.47■□□□□ 0.23
NR1I3-225ENST00000508387 MAP1SQ66K74 1059 aaPredicted RBP16.47■□□□□ 0.23
NR1I3-225ENST00000508387 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
NR1I3-225ENST00000508387 POLLQ9UGP5 575 aa16.47■□□□□ 0.23
NR1I3-225ENST00000508387 SHTN1A0MZ66 631 aa16.46■□□□□ 0.23
NR1I3-225ENST00000508387 NEURL1BA8MQ27 555 aa16.46■□□□□ 0.23
NR1I3-225ENST00000508387 RIMBP2O15034 1052 aa16.46■□□□□ 0.23
NR1I3-225ENST00000508387 PDE8AO60658 829 aa16.46■□□□□ 0.23
NR1I3-225ENST00000508387 RAD17O75943 681 aa16.46■□□□□ 0.23
NR1I3-225ENST00000508387 FMR1Q06787 632 aaKnown RBP eCLIP16.46■□□□□ 0.23
NR1I3-225ENST00000508387 ZNRF3Q9ULT6 936 aa16.46■□□□□ 0.23
NR1I3-225ENST00000508387 NSFL1CQ9UNZ2 370 aaKnown RBP16.46■□□□□ 0.23
NR1I3-225ENST00000508387 CLEC11AQ9Y240 323 aa16.46■□□□□ 0.23
NR1I3-225ENST00000508387 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
NR1I3-225ENST00000508387 ITGBL1O95965 494 aaPredicted RBP16.45■□□□□ 0.22
NR1I3-225ENST00000508387 DBNDD1Q9H9R9 158 aa16.45■□□□□ 0.22
NR1I3-225ENST00000508387 SCN9AQ15858 1988 aa16.44■□□□□ 0.22
NR1I3-225ENST00000508387 GMPSP49915 693 aaPredicted RBP16.44■□□□□ 0.22
NR1I3-225ENST00000508387 CTSWP56202 376 aa16.44■□□□□ 0.22
NR1I3-225ENST00000508387 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
NR1I3-225ENST00000508387 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
NR1I3-225ENST00000508387 TMC4Q7Z404 712 aa16.44■□□□□ 0.22
NR1I3-225ENST00000508387 KCNQ5Q9NR82 932 aa16.44■□□□□ 0.22
NR1I3-225ENST00000508387 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
NR1I3-225ENST00000508387 WTIPA6NIX2 430 aaPredicted RBP16.43■□□□□ 0.22
NR1I3-225ENST00000508387 F6X3S4 739 aa16.43■□□□□ 0.22
NR1I3-225ENST00000508387 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
NR1I3-225ENST00000508387 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
NR1I3-225ENST00000508387 DOK7Q18PE1 504 aa16.43■□□□□ 0.22
NR1I3-225ENST00000508387 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
NR1I3-225ENST00000508387 UBE3BQ7Z3V4 1068 aa16.43■□□□□ 0.22
NR1I3-225ENST00000508387 JMYQ8N9B5 988 aa16.43■□□□□ 0.22
NR1I3-225ENST00000508387 TBC1D16Q8TBP0 767 aa16.43■□□□□ 0.22
NR1I3-225ENST00000508387 VPS33BQ9H267 617 aa16.43■□□□□ 0.22
NR1I3-225ENST00000508387 GREM2Q9H772 168 aa16.43■□□□□ 0.22
NR1I3-225ENST00000508387 MKRN1Q9UHC7 482 aaKnown RBP16.43■□□□□ 0.22
NR1I3-225ENST00000508387 CASP7P55210 303 aa16.42■□□□□ 0.22
NR1I3-225ENST00000508387 NEXNQ0ZGT2 675 aa16.42■□□□□ 0.22
NR1I3-225ENST00000508387 WASHC4Q2M389 1173 aa16.42■□□□□ 0.22
NR1I3-225ENST00000508387 CIAPIN1Q6FI81 312 aa16.42■□□□□ 0.22
NR1I3-225ENST00000508387 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
NR1I3-225ENST00000508387 CNTROBQ8N137 903 aa16.42■□□□□ 0.22
NR1I3-225ENST00000508387 DNAAF4Q8WXU2 420 aa16.42■□□□□ 0.22
NR1I3-225ENST00000508387 GPRC5DQ9NZD1 345 aa16.42■□□□□ 0.22
NR1I3-225ENST00000508387 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
NR1I3-225ENST00000508387 CACNA1FO60840 1977 aa16.42■□□□□ 0.22
NR1I3-225ENST00000508387 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
NR1I3-225ENST00000508387 ECE2O60344 883 aa16.41■□□□□ 0.22
NR1I3-225ENST00000508387 UFL1O94874 794 aa16.41■□□□□ 0.22
NR1I3-225ENST00000508387 TTLL11Q8NHH1 800 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms