RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 ZC3H15Q8WU90 426 aaKnown RBP17.53■□□□□ 0.4
SGCA-206ENST00000508382 LAMB2P55268 1798 aa17.53■□□□□ 0.4
SGCA-206ENST00000508382 E9PSI1 815 aa17.52■□□□□ 0.4
SGCA-206ENST00000508382 APAF1O14727 1248 aa17.52■□□□□ 0.4
SGCA-206ENST00000508382 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
SGCA-206ENST00000508382 CSRNP1Q96S65 589 aa17.52■□□□□ 0.4
SGCA-206ENST00000508382 LAMB4A4D0S4 1761 aa17.52■□□□□ 0.4
SGCA-206ENST00000508382 TAF1P21675 1872 aa17.52■□□□□ 0.39
SGCA-206ENST00000508382 BTBD11A6QL63 1104 aa17.51■□□□□ 0.39
SGCA-206ENST00000508382 RGL2O15211 777 aa17.51■□□□□ 0.39
SGCA-206ENST00000508382 GTF2E1P29083 439 aaPredicted RBP17.51■□□□□ 0.39
SGCA-206ENST00000508382 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
SGCA-206ENST00000508382 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
SGCA-206ENST00000508382 ZNRF3Q9ULT6 936 aa17.51■□□□□ 0.39
SGCA-206ENST00000508382 SZT2Q5T011 3432 aa17.5■□□□□ 0.39
SGCA-206ENST00000508382 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
SGCA-206ENST00000508382 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
SGCA-206ENST00000508382 RAD17O75943 681 aa17.49■□□□□ 0.39
SGCA-206ENST00000508382 EGFRP00533 1210 aa17.49■□□□□ 0.39
SGCA-206ENST00000508382 GRIPAP1Q4V328 841 aa17.49■□□□□ 0.39
SGCA-206ENST00000508382 RPGRQ92834 1020 aaKnown RBP17.49■□□□□ 0.39
SGCA-206ENST00000508382 GCC1Q96CN9 775 aa17.49■□□□□ 0.39
SGCA-206ENST00000508382 CRAMP1Q96RY5 1269 aa17.49■□□□□ 0.39
SGCA-206ENST00000508382 GBA2Q9HCG7 927 aaPredicted RBP17.49■□□□□ 0.39
SGCA-206ENST00000508382 UBN2Q6ZU65 1347 aa17.48■□□□□ 0.39
SGCA-206ENST00000508382 CDHR2Q9BYE9 1310 aa17.48■□□□□ 0.39
SGCA-206ENST00000508382 HTTP42858 3142 aa17.48■□□□□ 0.39
SGCA-206ENST00000508382 YDJCA8MPS7 323 aa17.48■□□□□ 0.39
SGCA-206ENST00000508382 SLC10A3P09131 477 aa17.48■□□□□ 0.39
SGCA-206ENST00000508382 ZNF157P51786 506 aaPredicted RBP17.48■□□□□ 0.39
SGCA-206ENST00000508382 WDR63Q8IWG1 891 aa17.48■□□□□ 0.39
SGCA-206ENST00000508382 CNOT7Q9UIV1 285 aaKnown RBP17.48■□□□□ 0.39
SGCA-206ENST00000508382 BRCA2P51587 3418 aa17.48■□□□□ 0.39
SGCA-206ENST00000508382 DUOX1Q9NRD9 1551 aa17.48■□□□□ 0.39
SGCA-206ENST00000508382 ADM5C9JUS6 153 aa17.47■□□□□ 0.39
SGCA-206ENST00000508382 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
SGCA-206ENST00000508382 FXR1P51114 621 aaKnown RBP eCLIP17.47■□□□□ 0.39
SGCA-206ENST00000508382 SAMD7Q7Z3H4 446 aa17.47■□□□□ 0.39
SGCA-206ENST00000508382 CCDC102AQ96A19 550 aa17.47■□□□□ 0.39
SGCA-206ENST00000508382 BCL2L13Q9BXK5 485 aa17.47■□□□□ 0.39
SGCA-206ENST00000508382 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
SGCA-206ENST00000508382 CENPFP49454 3210 aa17.46■□□□□ 0.39
SGCA-206ENST00000508382 SLFN5Q08AF3 891 aa17.46■□□□□ 0.39
SGCA-206ENST00000508382 SUSD4Q5VX71 490 aa17.46■□□□□ 0.39
SGCA-206ENST00000508382 MICALL2Q8IY33 904 aa17.46■□□□□ 0.39
SGCA-206ENST00000508382 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
SGCA-206ENST00000508382 RBM17Q96I25 401 aaKnown RBP17.46■□□□□ 0.39
SGCA-206ENST00000508382 NYXQ9GZU5 481 aa17.46■□□□□ 0.39
SGCA-206ENST00000508382 VPS33BQ9H267 617 aa17.46■□□□□ 0.39
SGCA-206ENST00000508382 ATP6V0A2Q9Y487 856 aa17.46■□□□□ 0.39
SGCA-206ENST00000508382 ZBTB12Q9Y330 459 aaPredicted RBP17.45■□□□□ 0.38
SGCA-206ENST00000508382 ANKRD36CQ5JPF3 1778 aa17.45■□□□□ 0.38
SGCA-206ENST00000508382 PAPPA2Q9BXP8 1791 aa17.45■□□□□ 0.38
SGCA-206ENST00000508382 GPTP24298 496 aa17.44■□□□□ 0.38
SGCA-206ENST00000508382 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
SGCA-206ENST00000508382 KIAA2012Q0VF49 1180 aa17.44■□□□□ 0.38
SGCA-206ENST00000508382 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
SGCA-206ENST00000508382 KRT26Q7Z3Y9 468 aa17.44■□□□□ 0.38
SGCA-206ENST00000508382 WWC1Q8IX03 1113 aa17.44■□□□□ 0.38
SGCA-206ENST00000508382 TRMT2AQ8IZ69 625 aaKnown RBP17.44■□□□□ 0.38
SGCA-206ENST00000508382 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.44■□□□□ 0.38
SGCA-206ENST00000508382 ZNF296Q8WUU4 475 aaPredicted RBP17.44■□□□□ 0.38
SGCA-206ENST00000508382 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
SGCA-206ENST00000508382 PPP4R2Q9NY27 417 aa17.44■□□□□ 0.38
SGCA-206ENST00000508382 IBTKQ9P2D0 1353 aaPredicted RBP17.43■□□□□ 0.38
SGCA-206ENST00000508382 NTSR2O95665 410 aa17.43■□□□□ 0.38
SGCA-206ENST00000508382 TTLL7Q6ZT98 887 aa17.43■□□□□ 0.38
SGCA-206ENST00000508382 C2orf69Q8N8R5 385 aa17.43■□□□□ 0.38
SGCA-206ENST00000508382 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
SGCA-206ENST00000508382 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
SGCA-206ENST00000508382 ABCC4O15439 1325 aa17.43■□□□□ 0.38
SGCA-206ENST00000508382 RBBP6Q7Z6E9 1792 aaKnown RBP17.43■□□□□ 0.38
SGCA-206ENST00000508382 LRRC37AA6NMS7 1700 aa17.42■□□□□ 0.38
SGCA-206ENST00000508382 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
SGCA-206ENST00000508382 TBC1D10BQ4KMP7 808 aaPredicted RBP17.42■□□□□ 0.38
SGCA-206ENST00000508382 RASAL3Q86YV0 1011 aa17.42■□□□□ 0.38
SGCA-206ENST00000508382 SCN9AQ15858 1988 aa17.42■□□□□ 0.38
SGCA-206ENST00000508382 IL16Q14005 1332 aa17.42■□□□□ 0.38
SGCA-206ENST00000508382 H7C1D1 291 aa17.41■□□□□ 0.38
SGCA-206ENST00000508382 TBC1D8O95759 1140 aa17.41■□□□□ 0.38
SGCA-206ENST00000508382 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
SGCA-206ENST00000508382 TNIP1Q15025 636 aa17.41■□□□□ 0.38
SGCA-206ENST00000508382 PKN2Q16513 984 aaKnown RBP17.41■□□□□ 0.38
SGCA-206ENST00000508382 PLEKHF1Q96S99 279 aa17.41■□□□□ 0.38
SGCA-206ENST00000508382 ASTN2O75129 1339 aaPredicted RBP17.41■□□□□ 0.38
SGCA-206ENST00000508382 MAP3K15Q6ZN16 1313 aa17.41■□□□□ 0.38
SGCA-206ENST00000508382 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
SGCA-206ENST00000508382 ZNF34Q8IZ26 560 aa17.4■□□□□ 0.38
SGCA-206ENST00000508382 KDM3BQ7LBC6 1761 aa17.4■□□□□ 0.38
SGCA-206ENST00000508382 CT47B1P0C2W7 299 aaPredicted RBP17.39■□□□□ 0.37
SGCA-206ENST00000508382 DPP8Q6V1X1 898 aaPredicted RBP17.39■□□□□ 0.37
SGCA-206ENST00000508382 MCM10Q7L590 875 aa17.39■□□□□ 0.37
SGCA-206ENST00000508382 SUPT20HQ8NEM7 779 aa17.39■□□□□ 0.37
SGCA-206ENST00000508382 RSPH6AQ9H0K4 717 aa17.39■□□□□ 0.37
SGCA-206ENST00000508382 COL4A1P02462 1669 aa17.39■□□□□ 0.37
SGCA-206ENST00000508382 KIAA0100Q14667 2235 aaKnown RBP17.38■□□□□ 0.37
SGCA-206ENST00000508382 POTEFA5A3E0 1075 aa17.38■□□□□ 0.37
SGCA-206ENST00000508382 PSMD14O00487 310 aa17.38■□□□□ 0.37
SGCA-206ENST00000508382 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
SGCA-206ENST00000508382 RBM26Q5T8P6 1007 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms