RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 RBM17Q96I25 401 aaKnown RBP12.23□□□□□ -0.45
CAST-220ENST00000508117 PHACTR3Q96KR7 559 aa12.23□□□□□ -0.45
CAST-220ENST00000508117 RTFDC1Q9BY42 306 aaPredicted RBP12.23□□□□□ -0.45
CAST-220ENST00000508117 ZNRF3Q9ULT6 936 aa12.23□□□□□ -0.45
CAST-220ENST00000508117 PPEF1O14829 653 aaPredicted RBP12.22□□□□□ -0.45
CAST-220ENST00000508117 PPIP5K2O43314 1243 aa12.22□□□□□ -0.45
CAST-220ENST00000508117 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
CAST-220ENST00000508117 CXCL9Q07325 125 aa12.22□□□□□ -0.45
CAST-220ENST00000508117 CDC37L1Q7L3B6 337 aa12.22□□□□□ -0.45
CAST-220ENST00000508117 NUTM1Q86Y26 1132 aa12.22□□□□□ -0.45
CAST-220ENST00000508117 SUPT20HQ8NEM7 779 aa12.22□□□□□ -0.45
CAST-220ENST00000508117 RSPH6AQ9H0K4 717 aa12.22□□□□□ -0.45
CAST-220ENST00000508117 SAGE1Q9NXZ1 904 aa12.22□□□□□ -0.45
CAST-220ENST00000508117 MAP3K15Q6ZN16 1313 aa12.21□□□□□ -0.45
CAST-220ENST00000508117 PRKAR2BP31323 418 aa12.21□□□□□ -0.45
CAST-220ENST00000508117 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
CAST-220ENST00000508117 RTF1Q92541 710 aaKnown RBP12.21□□□□□ -0.45
CAST-220ENST00000508117 GLIS2Q9BZE0 524 aaPredicted RBP12.21□□□□□ -0.45
CAST-220ENST00000508117 ATP6V0A2Q9Y487 856 aa12.21□□□□□ -0.45
CAST-220ENST00000508117 GMPSP49915 693 aaPredicted RBP12.2□□□□□ -0.46
CAST-220ENST00000508117 AOC3Q16853 763 aa12.2□□□□□ -0.46
CAST-220ENST00000508117 CC2D1BQ5T0F9 858 aaKnown RBP12.2□□□□□ -0.46
CAST-220ENST00000508117 PRPF38BQ5VTL8 546 aaKnown RBP12.2□□□□□ -0.46
CAST-220ENST00000508117 TMX4Q9H1E5 349 aaPredicted RBP12.2□□□□□ -0.46
CAST-220ENST00000508117 UBN2Q6ZU65 1347 aa12.19□□□□□ -0.46
CAST-220ENST00000508117 HIRAP54198 1017 aaPredicted RBP12.19□□□□□ -0.46
CAST-220ENST00000508117 TNIP1Q15025 636 aa12.19□□□□□ -0.46
CAST-220ENST00000508117 ZNF34Q8IZ26 560 aa12.19□□□□□ -0.46
CAST-220ENST00000508117 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
CAST-220ENST00000508117 AKAP11Q9UKA4 1901 aa12.19□□□□□ -0.46
CAST-220ENST00000508117 NTSR2O95665 410 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 HUNKP57058 714 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 KIAA2012Q0VF49 1180 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
CAST-220ENST00000508117 SLC10A5Q5PT55 438 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 SUSD4Q5VX71 490 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 RGMBQ6NW40 437 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 KIF6Q6ZMV9 814 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 MCM10Q7L590 875 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 CCDC102AQ96A19 550 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 ZIC5Q96T25 663 aa12.18□□□□□ -0.46
CAST-220ENST00000508117 FAM155AB1AL88 458 aaPredicted RBP12.17□□□□□ -0.46
CAST-220ENST00000508117 BBOX1O75936 387 aa12.17□□□□□ -0.46
CAST-220ENST00000508117 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
CAST-220ENST00000508117 GIGYF2Q6Y7W6 1299 aaKnown RBP12.17□□□□□ -0.46
CAST-220ENST00000508117 PPP1R42Q7Z4L9 355 aa12.17□□□□□ -0.46
CAST-220ENST00000508117 NLRP3Q96P20 1036 aa12.17□□□□□ -0.46
CAST-220ENST00000508117 BCL2L13Q9BXK5 485 aa12.17□□□□□ -0.46
CAST-220ENST00000508117 ZNF408Q9H9D4 720 aa12.17□□□□□ -0.46
CAST-220ENST00000508117 ANKRD36CQ5JPF3 1778 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 KDM3BQ7LBC6 1761 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 H7C1D1 291 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 PARP10Q53GL7 1025 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 SLC51AQ86UW1 340 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 SP8Q8IXZ3 490 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 TRPM4Q8TD43 1214 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
CAST-220ENST00000508117 DPF2Q92785 391 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 CFAP53Q96M91 514 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 CNOT7Q9UIV1 285 aaKnown RBP12.16□□□□□ -0.46
CAST-220ENST00000508117 NUDCQ9Y266 331 aa12.16□□□□□ -0.46
CAST-220ENST00000508117 POLR2AP24928 1970 aaKnown RBP12.16□□□□□ -0.46
CAST-220ENST00000508117 ABCC4O15439 1325 aa12.15□□□□□ -0.46
CAST-220ENST00000508117 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
CAST-220ENST00000508117 TCERG1O14776 1098 aaKnown RBP12.15□□□□□ -0.46
CAST-220ENST00000508117 GPTP24298 496 aa12.15□□□□□ -0.46
CAST-220ENST00000508117 SOX10P56693 466 aa12.15□□□□□ -0.46
CAST-220ENST00000508117 DPP8Q6V1X1 898 aaPredicted RBP12.15□□□□□ -0.46
CAST-220ENST00000508117 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.46
CAST-220ENST00000508117 C3orf67Q6ZVT6 689 aa12.15□□□□□ -0.46
CAST-220ENST00000508117 MPNDQ8N594 471 aa12.15□□□□□ -0.46
CAST-220ENST00000508117 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
CAST-220ENST00000508117 KIF23Q02241 960 aaPredicted RBP12.14□□□□□ -0.47
CAST-220ENST00000508117 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
CAST-220ENST00000508117 CTU1Q7Z7A3 348 aaKnown RBP12.14□□□□□ -0.47
CAST-220ENST00000508117 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
CAST-220ENST00000508117 NGEFQ8N5V2 710 aa12.14□□□□□ -0.47
CAST-220ENST00000508117 C2orf69Q8N8R5 385 aa12.14□□□□□ -0.47
CAST-220ENST00000508117 GBA2Q9HCG7 927 aaPredicted RBP12.14□□□□□ -0.47
CAST-220ENST00000508117 RNF186Q9NXI6 227 aa12.14□□□□□ -0.47
CAST-220ENST00000508117 LAMB2P55268 1798 aa12.13□□□□□ -0.47
CAST-220ENST00000508117 YDJCA8MPS7 323 aa12.13□□□□□ -0.47
CAST-220ENST00000508117 TRPA1O75762 1119 aa12.13□□□□□ -0.47
CAST-220ENST00000508117 RAD17O75943 681 aa12.13□□□□□ -0.47
CAST-220ENST00000508117 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
CAST-220ENST00000508117 KRT26Q7Z3Y9 468 aa12.13□□□□□ -0.47
CAST-220ENST00000508117 TMC4Q7Z404 712 aa12.13□□□□□ -0.47
CAST-220ENST00000508117 MICALL2Q8IY33 904 aa12.13□□□□□ -0.47
CAST-220ENST00000508117 UTP14AQ9BVJ6 771 aaKnown RBP12.13□□□□□ -0.47
CAST-220ENST00000508117 ZBTB3Q9H5J0 574 aa12.13□□□□□ -0.47
CAST-220ENST00000508117 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
CAST-220ENST00000508117 LRRC37AA6NMS7 1700 aa12.12□□□□□ -0.47
CAST-220ENST00000508117 SLC10A3P09131 477 aa12.12□□□□□ -0.47
CAST-220ENST00000508117 U2AF1L5P0DN76 240 aaPredicted RBP12.12□□□□□ -0.47
CAST-220ENST00000508117 RPS12P25398 132 aaKnown RBP12.12□□□□□ -0.47
CAST-220ENST00000508117 ZNF157P51786 506 aaPredicted RBP12.12□□□□□ -0.47
CAST-220ENST00000508117 U2AF1Q01081 240 aaKnown RBP eCLIP12.12□□□□□ -0.47
CAST-220ENST00000508117 PKN2Q16513 984 aaKnown RBP12.12□□□□□ -0.47
CAST-220ENST00000508117 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
CAST-220ENST00000508117 DUOX1Q9NRD9 1551 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms