RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
DDX41-208ENST00000507955 ST3GAL1Q11201 340 aa17.4■□□□□ 0.38
DDX41-208ENST00000507955 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
DDX41-208ENST00000507955 ME3Q16798 604 aa17.4■□□□□ 0.38
DDX41-208ENST00000507955 DNAJC10Q8IXB1 793 aa17.4■□□□□ 0.38
DDX41-208ENST00000507955 PIGBQ92521 554 aa17.4■□□□□ 0.38
DDX41-208ENST00000507955 PPP1R9BQ96SB3 815 aa17.4■□□□□ 0.38
DDX41-208ENST00000507955 ZSWIM6Q9HCJ5 1215 aa17.4■□□□□ 0.38
DDX41-208ENST00000507955 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
DDX41-208ENST00000507955 CYP46A1Q9Y6A2 500 aa17.4■□□□□ 0.38
DDX41-208ENST00000507955 PRIM1P49642 420 aaKnown RBP17.39■□□□□ 0.37
DDX41-208ENST00000507955 KCPQ6ZWJ8 1503 aa17.39■□□□□ 0.37
DDX41-208ENST00000507955 ABCC6O95255 1503 aa17.38■□□□□ 0.37
DDX41-208ENST00000507955 SYCE3A1L190 88 aa17.38■□□□□ 0.37
DDX41-208ENST00000507955 ZKSCAN1P17029 563 aaPredicted RBP17.38■□□□□ 0.37
DDX41-208ENST00000507955 ATP5JP18859 108 aa17.38■□□□□ 0.37
DDX41-208ENST00000507955 SYT1P21579 422 aa17.38■□□□□ 0.37
DDX41-208ENST00000507955 TPCN1Q9ULQ1 816 aa17.38■□□□□ 0.37
DDX41-208ENST00000507955 CCDC173Q0VFZ6 552 aa17.38■□□□□ 0.37
DDX41-208ENST00000507955 FAM89AQ96GI7 184 aa17.38■□□□□ 0.37
DDX41-208ENST00000507955 TCHHQ07283 1943 aa17.38■□□□□ 0.37
DDX41-208ENST00000507955 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
DDX41-208ENST00000507955 RBSNQ9H1K0 784 aa17.37■□□□□ 0.37
DDX41-208ENST00000507955 SMC3Q9UQE7 1217 aa17.37■□□□□ 0.37
DDX41-208ENST00000507955 TAF5LO75529 589 aa17.37■□□□□ 0.37
DDX41-208ENST00000507955 GJB2P29033 226 aa17.37■□□□□ 0.37
DDX41-208ENST00000507955 USP48Q86UV5 1035 aa17.37■□□□□ 0.37
DDX41-208ENST00000507955 CNPY2Q9Y2B0 182 aa17.37■□□□□ 0.37
DDX41-208ENST00000507955 PARP4Q9UKK3 1724 aaKnown RBP17.37■□□□□ 0.37
DDX41-208ENST00000507955 GOLIM4O00461 696 aa17.36■□□□□ 0.37
DDX41-208ENST00000507955 VPS53Q5VIR6 699 aa17.36■□□□□ 0.37
DDX41-208ENST00000507955 STK3Q13188 491 aa17.36■□□□□ 0.37
DDX41-208ENST00000507955 KCNB2Q92953 911 aa17.36■□□□□ 0.37
DDX41-208ENST00000507955 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
DDX41-208ENST00000507955 HIP1O00291 1037 aa17.35■□□□□ 0.37
DDX41-208ENST00000507955 GPTP24298 496 aa17.35■□□□□ 0.37
DDX41-208ENST00000507955 A0A0G2JLW4 131 aa17.35■□□□□ 0.37
DDX41-208ENST00000507955 STX6O43752 255 aa17.35■□□□□ 0.37
DDX41-208ENST00000507955 ATG3Q9NT62 314 aa17.35■□□□□ 0.37
DDX41-208ENST00000507955 WDR33Q9C0J8 1336 aaKnown RBP17.35■□□□□ 0.37
DDX41-208ENST00000507955 ZNF609O15014 1411 aa17.35■□□□□ 0.37
DDX41-208ENST00000507955 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
DDX41-208ENST00000507955 A0A0G2JS52 829 aa17.34■□□□□ 0.37
DDX41-208ENST00000507955 LAMB4A4D0S4 1761 aa17.34■□□□□ 0.37
DDX41-208ENST00000507955 HLFQ16534 295 aa17.34■□□□□ 0.37
DDX41-208ENST00000507955 CCDC191Q8NCU4 936 aa17.34■□□□□ 0.37
DDX41-208ENST00000507955 SLC4A9Q96Q91 983 aa17.34■□□□□ 0.37
DDX41-208ENST00000507955 LRRC2Q9BYS8 371 aa17.34■□□□□ 0.37
DDX41-208ENST00000507955 ZSCAN22P10073 491 aaPredicted RBP17.34■□□□□ 0.37
DDX41-208ENST00000507955 HAUS7Q99871 368 aa17.34■□□□□ 0.37
DDX41-208ENST00000507955 SNRKQ9NRH2 765 aa17.34■□□□□ 0.37
DDX41-208ENST00000507955 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.34■□□□□ 0.37
DDX41-208ENST00000507955 TM6SF1Q9BZW5 370 aa17.33■□□□□ 0.36
DDX41-208ENST00000507955 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.36
DDX41-208ENST00000507955 BLOC1S2Q6QNY1 142 aa17.33■□□□□ 0.36
DDX41-208ENST00000507955 RNF214Q8ND24 703 aa17.33■□□□□ 0.36
DDX41-208ENST00000507955 UBR2Q8IWV8 1755 aa17.32■□□□□ 0.36
DDX41-208ENST00000507955 ABCA3Q99758 1704 aa17.32■□□□□ 0.36
DDX41-208ENST00000507955 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
DDX41-208ENST00000507955 VPS37CA5D8V6 355 aaPredicted RBP17.32■□□□□ 0.36
DDX41-208ENST00000507955 FAM173BQ6P4H8 233 aa17.32■□□□□ 0.36
DDX41-208ENST00000507955 EYA2O00167 538 aa17.32■□□□□ 0.36
DDX41-208ENST00000507955 FIBPO43427 364 aa17.32■□□□□ 0.36
DDX41-208ENST00000507955 ADORA1P30542 326 aa17.32■□□□□ 0.36
DDX41-208ENST00000507955 TCIRG1Q13488 830 aa17.32■□□□□ 0.36
DDX41-208ENST00000507955 TOB2Q14106 344 aaPredicted RBP17.32■□□□□ 0.36
DDX41-208ENST00000507955 FERMT3Q86UX7 667 aa17.32■□□□□ 0.36
DDX41-208ENST00000507955 ISCA1Q9BUE6 129 aa17.31■□□□□ 0.36
DDX41-208ENST00000507955 CYP21A2P08686 494 aa17.31■□□□□ 0.36
DDX41-208ENST00000507955 PAG1Q9NWQ8 432 aa17.31■□□□□ 0.36
DDX41-208ENST00000507955 TNS2Q63HR2 1409 aa17.31■□□□□ 0.36
DDX41-208ENST00000507955 TJP1Q07157 1748 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 NUP188Q5SRE5 1749 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 PLEKHG2Q9H7P9 1386 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 PPFIA3O75145 1194 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 F13A1P00488 732 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 RPS6KB1P23443 525 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 FKBP4Q02790 459 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDX41-208ENST00000507955 DNM1Q05193 864 aaKnown RBP17.3■□□□□ 0.36
DDX41-208ENST00000507955 ZSCAN30Q86W11 494 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 IL15P40933 162 aaPredicted RBP17.3■□□□□ 0.36
DDX41-208ENST00000507955 MCMDC2Q4G0Z9 681 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 HSP90AB3PQ58FF7 597 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 RNF20Q5VTR2 975 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 PI16Q6UXB8 463 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 KBTBD3Q8NAB2 608 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 MTMR6Q9Y217 621 aa17.3■□□□□ 0.36
DDX41-208ENST00000507955 PSMA5P28066 241 aa17.29■□□□□ 0.36
DDX41-208ENST00000507955 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
DDX41-208ENST00000507955 TBC1D2BQ9UPU7 963 aa17.29■□□□□ 0.36
DDX41-208ENST00000507955 IFIT1P09914 478 aaKnown RBP17.28■□□□□ 0.36
DDX41-208ENST00000507955 STOX1Q6ZVD7 989 aa17.28■□□□□ 0.36
DDX41-208ENST00000507955 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
DDX41-208ENST00000507955 PDLIM2Q96JY6 352 aa17.28■□□□□ 0.36
DDX41-208ENST00000507955 ZBTB1Q9Y2K1 713 aa17.28■□□□□ 0.36
DDX41-208ENST00000507955 SCARF1Q14162 830 aa17.28■□□□□ 0.36
DDX41-208ENST00000507955 KIF6Q6ZMV9 814 aa17.28■□□□□ 0.36
DDX41-208ENST00000507955 ADAMTS2O95450 1211 aa17.27■□□□□ 0.36
DDX41-208ENST00000507955 LARP1BQ659C4 914 aaKnown RBP17.27■□□□□ 0.36
DDX41-208ENST00000507955 LRSAM1Q6UWE0 723 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms