RNA–Protein interactions for RNA: ENST00000507891.1

SH3TC1-213, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-213ENST00000507891 TTLL11Q8NHH1 800 aa21.85■■□□□ 1.09
SH3TC1-213ENST00000507891 USP44Q9H0E7 712 aa21.85■■□□□ 1.09
SH3TC1-213ENST00000507891 PPEF1O14829 653 aaPredicted RBP21.84■■□□□ 1.09
SH3TC1-213ENST00000507891 BBOX1O75936 387 aa21.84■■□□□ 1.09
SH3TC1-213ENST00000507891 GRAPQ13588 217 aa21.84■■□□□ 1.09
SH3TC1-213ENST00000507891 INTS3Q68E01 1043 aaKnown RBP21.84■■□□□ 1.09
SH3TC1-213ENST00000507891 GRAPLQ8TC17 118 aaPredicted RBP21.84■■□□□ 1.09
SH3TC1-213ENST00000507891 C7orf43Q8WVR3 580 aa21.84■■□□□ 1.09
SH3TC1-213ENST00000507891 UTYO14607 1347 aa21.83■■□□□ 1.09
SH3TC1-213ENST00000507891 SOGA3Q5TF21 947 aa21.83■■□□□ 1.09
SH3TC1-213ENST00000507891 SEC31BQ9NQW1 1179 aa21.83■■□□□ 1.09
SH3TC1-213ENST00000507891 SLX4Q8IY92 1834 aa21.83■■□□□ 1.08
SH3TC1-213ENST00000507891 LAMB2P55268 1798 aa21.82■■□□□ 1.08
SH3TC1-213ENST00000507891 FOXO4P98177 505 aa21.82■■□□□ 1.08
SH3TC1-213ENST00000507891 OLFM4Q6UX06 510 aa21.82■■□□□ 1.08
SH3TC1-213ENST00000507891 FTSJ3Q8IY81 847 aaKnown RBP21.82■■□□□ 1.08
SH3TC1-213ENST00000507891 DZIP1LQ8IYY4 767 aaKnown RBP21.82■■□□□ 1.08
SH3TC1-213ENST00000507891 CELF1Q92879 486 aaKnown RBP21.82■■□□□ 1.08
SH3TC1-213ENST00000507891 SUCLG2Q96I99 432 aa21.82■■□□□ 1.08
SH3TC1-213ENST00000507891 CSF1RP07333 972 aa21.81■■□□□ 1.08
SH3TC1-213ENST00000507891 EPHA10Q5JZY3 1008 aa21.81■■□□□ 1.08
SH3TC1-213ENST00000507891 TMX4Q9H1E5 349 aaPredicted RBP21.81■■□□□ 1.08
SH3TC1-213ENST00000507891 GREM2Q9H772 168 aa21.81■■□□□ 1.08
SH3TC1-213ENST00000507891 ARFGEF1Q9Y6D6 1849 aa21.8■■□□□ 1.08
SH3TC1-213ENST00000507891 RPS8P62241 208 aaKnown RBP21.8■■□□□ 1.08
SH3TC1-213ENST00000507891 CCDC93Q567U6 631 aa21.8■■□□□ 1.08
SH3TC1-213ENST00000507891 TMEM57Q8N5G2 664 aa21.8■■□□□ 1.08
SH3TC1-213ENST00000507891 PLIN1O60240 522 aa21.79■■□□□ 1.08
SH3TC1-213ENST00000507891 CC2D2BQ6DHV5 1058 aa21.79■■□□□ 1.08
SH3TC1-213ENST00000507891 LMBR1LQ6UX01 489 aa21.79■■□□□ 1.08
SH3TC1-213ENST00000507891 SP8Q8IXZ3 490 aa21.79■■□□□ 1.08
SH3TC1-213ENST00000507891 CHMP3Q9Y3E7 222 aa21.79■■□□□ 1.08
SH3TC1-213ENST00000507891 ATP6V0A2Q9Y487 856 aa21.79■■□□□ 1.08
SH3TC1-213ENST00000507891 UBTFL1P0CB47 393 aaPredicted RBP21.78■■□□□ 1.08
SH3TC1-213ENST00000507891 MS4A1P11836 297 aa21.78■■□□□ 1.08
SH3TC1-213ENST00000507891 TMC4Q7Z404 712 aa21.78■■□□□ 1.08
SH3TC1-213ENST00000507891 RTKN2Q8IZC4 609 aa21.78■■□□□ 1.08
SH3TC1-213ENST00000507891 KAZALD1Q96I82 304 aa21.78■■□□□ 1.08
SH3TC1-213ENST00000507891 CDC5LQ99459 802 aaKnown RBP21.78■■□□□ 1.08
SH3TC1-213ENST00000507891 CACNA1SQ13698 1873 aa21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 NFKBIEO00221 500 aa21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 RLBP1P12271 317 aa21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 ITGA6P23229 1130 aa21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 RASSF7Q02833 373 aa21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 FAM161AQ3B820 660 aa21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 SLC51AQ86UW1 340 aa21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 ANKRD18AQ8IVF6 992 aa21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 MEIS3Q99687 375 aa21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 BICC1Q9H694 974 aaKnown RBP21.77■■□□□ 1.08
SH3TC1-213ENST00000507891 RTL9Q8NET4 1388 aa21.76■■□□□ 1.07
SH3TC1-213ENST00000507891 PANK1Q8TE04 598 aa21.76■■□□□ 1.07
SH3TC1-213ENST00000507891 HDAC5Q9UQL6 1122 aa21.76■■□□□ 1.07
SH3TC1-213ENST00000507891 ANKRD18BA2A2Z9 1011 aa21.75■■□□□ 1.07
SH3TC1-213ENST00000507891 GNAI3P08754 354 aa21.75■■□□□ 1.07
SH3TC1-213ENST00000507891 IFIT5Q13325 482 aaKnown RBP21.75■■□□□ 1.07
SH3TC1-213ENST00000507891 GRIPAP1Q4V328 841 aa21.75■■□□□ 1.07
SH3TC1-213ENST00000507891 ITPRIPQ8IWB1 547 aa21.75■■□□□ 1.07
SH3TC1-213ENST00000507891 TAOK3Q9H2K8 898 aa21.75■■□□□ 1.07
SH3TC1-213ENST00000507891 CCDC57Q2TAC2 916 aa21.74■■□□□ 1.07
SH3TC1-213ENST00000507891 TAF1P21675 1872 aa21.73■■□□□ 1.07
SH3TC1-213ENST00000507891 IGHMBP2P38935 993 aaKnown RBP21.73■■□□□ 1.07
SH3TC1-213ENST00000507891 FKBP4Q02790 459 aaKnown RBP eCLIP21.73■■□□□ 1.07
SH3TC1-213ENST00000507891 MPNDQ8N594 471 aa21.73■■□□□ 1.07
SH3TC1-213ENST00000507891 ANKRD44Q8N8A2 993 aa21.73■■□□□ 1.07
SH3TC1-213ENST00000507891 LMNB1P20700 586 aa21.72■■□□□ 1.07
SH3TC1-213ENST00000507891 RABL6Q3YEC7 729 aaPredicted RBP21.72■■□□□ 1.07
SH3TC1-213ENST00000507891 C9orf131Q5VYM1 1079 aa21.72■■□□□ 1.07
SH3TC1-213ENST00000507891 BSDC1Q9NW68 430 aaPredicted RBP21.72■■□□□ 1.07
SH3TC1-213ENST00000507891 LRRFIP2Q9Y608 721 aaKnown RBP21.72■■□□□ 1.07
SH3TC1-213ENST00000507891 LTBP3Q9NS15 1303 aa21.72■■□□□ 1.07
SH3TC1-213ENST00000507891 COL4A1P02462 1669 aa21.72■■□□□ 1.07
SH3TC1-213ENST00000507891 MYH3P11055 1940 aa21.71■■□□□ 1.07
SH3TC1-213ENST00000507891 PRELPP51888 382 aa21.71■■□□□ 1.07
SH3TC1-213ENST00000507891 TAF7LQ5H9L4 462 aa21.71■■□□□ 1.07
SH3TC1-213ENST00000507891 DPP8Q6V1X1 898 aaPredicted RBP21.71■■□□□ 1.07
SH3TC1-213ENST00000507891 PSMD1Q99460 953 aa21.71■■□□□ 1.07
SH3TC1-213ENST00000507891 MPHOSPH8Q99549 860 aa21.71■■□□□ 1.07
SH3TC1-213ENST00000507891 RNF181Q9P0P0 153 aa21.71■■□□□ 1.07
SH3TC1-213ENST00000507891 NSFL1CQ9UNZ2 370 aaKnown RBP21.71■■□□□ 1.07
SH3TC1-213ENST00000507891 ZNF594Q96JF6 807 aaPredicted RBP21.7■■□□□ 1.06
SH3TC1-213ENST00000507891 ZNF277Q9NRM2 450 aaPredicted RBP21.7■■□□□ 1.06
SH3TC1-213ENST00000507891 ZBTB7BO15156 539 aaPredicted RBP21.69■■□□□ 1.06
SH3TC1-213ENST00000507891 GNAI2P04899 355 aa21.69■■□□□ 1.06
SH3TC1-213ENST00000507891 YY1P25490 414 aa21.69■■□□□ 1.06
SH3TC1-213ENST00000507891 GPSM2P81274 684 aa21.69■■□□□ 1.06
SH3TC1-213ENST00000507891 COG6Q9Y2V7 657 aa21.69■■□□□ 1.06
SH3TC1-213ENST00000507891 SNED1Q8TER0 1413 aa21.69■■□□□ 1.06
SH3TC1-213ENST00000507891 PDE3AQ14432 1141 aa21.68■■□□□ 1.06
SH3TC1-213ENST00000507891 C20orf194Q5TEA3 1177 aa21.68■■□□□ 1.06
SH3TC1-213ENST00000507891 SUPT20HQ8NEM7 779 aa21.68■■□□□ 1.06
SH3TC1-213ENST00000507891 ANKIB1Q9P2G1 1089 aa21.68■■□□□ 1.06
SH3TC1-213ENST00000507891 MINPP1Q9UNW1 487 aa21.68■■□□□ 1.06
SH3TC1-213ENST00000507891 FER1L6Q2WGJ9 1857 aa21.68■■□□□ 1.06
SH3TC1-213ENST00000507891 MVPQ14764 893 aaKnown RBP21.67■■□□□ 1.06
SH3TC1-213ENST00000507891 LDHAL6AQ6ZMR3 332 aa21.67■■□□□ 1.06
SH3TC1-213ENST00000507891 RTFDC1Q9BY42 306 aaPredicted RBP21.67■■□□□ 1.06
SH3TC1-213ENST00000507891 IARSP41252 1262 aaKnown RBP21.66■■□□□ 1.06
SH3TC1-213ENST00000507891 CNNM1Q9NRU3 951 aa21.66■■□□□ 1.06
SH3TC1-213ENST00000507891 C6orf229H3BNL8 230 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms