RNA–Protein interactions for RNA: ENST00000507771.5

ITGA3-210, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-210ENST00000507771 C20orf194Q5TEA3 1177 aa13.93□□□□□ -0.18
ITGA3-210ENST00000507771 SUCLG2Q96I99 432 aa13.93□□□□□ -0.18
ITGA3-210ENST00000507771 LAMB2P55268 1798 aa13.93□□□□□ -0.18
ITGA3-210ENST00000507771 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
ITGA3-210ENST00000507771 ZBTB7BO15156 539 aaPredicted RBP13.92□□□□□ -0.18
ITGA3-210ENST00000507771 CCDC57Q2TAC2 916 aa13.92□□□□□ -0.18
ITGA3-210ENST00000507771 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
ITGA3-210ENST00000507771 CDC5LQ99459 802 aaKnown RBP13.92□□□□□ -0.18
ITGA3-210ENST00000507771 BICC1Q9H694 974 aaKnown RBP13.92□□□□□ -0.18
ITGA3-210ENST00000507771 LRRFIP2Q9Y608 721 aaKnown RBP13.92□□□□□ -0.18
ITGA3-210ENST00000507771 DDX60Q8IY21 1712 aaKnown RBP13.91□□□□□ -0.18
ITGA3-210ENST00000507771 ANKRD18BA2A2Z9 1011 aa13.91□□□□□ -0.18
ITGA3-210ENST00000507771 HOXA10P31260 410 aaPredicted RBP13.91□□□□□ -0.18
ITGA3-210ENST00000507771 IFIT5Q13325 482 aaKnown RBP13.91□□□□□ -0.18
ITGA3-210ENST00000507771 DALRD3Q5D0E6 543 aaKnown RBP13.91□□□□□ -0.18
ITGA3-210ENST00000507771 TAF7LQ5H9L4 462 aa13.91□□□□□ -0.18
ITGA3-210ENST00000507771 LMBR1LQ6UX01 489 aa13.91□□□□□ -0.18
ITGA3-210ENST00000507771 TTLL6Q8N841 843 aa13.91□□□□□ -0.18
ITGA3-210ENST00000507771 NLGN2Q8NFZ4 835 aa13.91□□□□□ -0.18
ITGA3-210ENST00000507771 TTLL11Q8NHH1 800 aa13.91□□□□□ -0.18
ITGA3-210ENST00000507771 CCDC85AQ96PX6 553 aaPredicted RBP13.91□□□□□ -0.18
ITGA3-210ENST00000507771 ANKRD31Q8N7Z5 1873 aa13.91□□□□□ -0.18
ITGA3-210ENST00000507771 BBOX1O75936 387 aa13.9□□□□□ -0.18
ITGA3-210ENST00000507771 NEFLP07196 543 aa13.9□□□□□ -0.18
ITGA3-210ENST00000507771 CSF1RP07333 972 aa13.9□□□□□ -0.18
ITGA3-210ENST00000507771 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
ITGA3-210ENST00000507771 FOXO4P98177 505 aa13.9□□□□□ -0.18
ITGA3-210ENST00000507771 AAMPQ13685 434 aa13.9□□□□□ -0.18
ITGA3-210ENST00000507771 C3orf67Q6ZVT6 689 aa13.9□□□□□ -0.18
ITGA3-210ENST00000507771 TMC4Q7Z404 712 aa13.9□□□□□ -0.18
ITGA3-210ENST00000507771 RTL9Q8NET4 1388 aa13.9□□□□□ -0.18
ITGA3-210ENST00000507771 TNRC6CQ9HCJ0 1690 aaKnown RBP13.9□□□□□ -0.18
ITGA3-210ENST00000507771 ITGA6P23229 1130 aa13.89□□□□□ -0.19
ITGA3-210ENST00000507771 GRAPQ13588 217 aa13.89□□□□□ -0.19
ITGA3-210ENST00000507771 RABL6Q3YEC7 729 aaPredicted RBP13.89□□□□□ -0.19
ITGA3-210ENST00000507771 SOGA3Q5TF21 947 aa13.89□□□□□ -0.19
ITGA3-210ENST00000507771 ANKRD18AQ8IVF6 992 aa13.89□□□□□ -0.19
ITGA3-210ENST00000507771 PELP1Q8IZL8 1130 aaKnown RBP13.89□□□□□ -0.19
ITGA3-210ENST00000507771 GRAPLQ8TC17 118 aaPredicted RBP13.89□□□□□ -0.19
ITGA3-210ENST00000507771 GREM2Q9H772 168 aa13.89□□□□□ -0.19
ITGA3-210ENST00000507771 MYH3P11055 1940 aa13.89□□□□□ -0.19
ITGA3-210ENST00000507771 PPEF1O14829 653 aaPredicted RBP13.88□□□□□ -0.19
ITGA3-210ENST00000507771 FAM161AQ3B820 660 aa13.88□□□□□ -0.19
ITGA3-210ENST00000507771 EPHA10Q5JZY3 1008 aa13.88□□□□□ -0.19
ITGA3-210ENST00000507771 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
ITGA3-210ENST00000507771 MPHOSPH8Q99549 860 aa13.88□□□□□ -0.19
ITGA3-210ENST00000507771 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
ITGA3-210ENST00000507771 BCS1LQ9Y276 419 aa13.88□□□□□ -0.19
ITGA3-210ENST00000507771 SRCAPQ6ZRS2 3230 aa13.88□□□□□ -0.19
ITGA3-210ENST00000507771 SRGAP3O43295 1099 aa13.87□□□□□ -0.19
ITGA3-210ENST00000507771 KCNA3P22001 575 aa13.87□□□□□ -0.19
ITGA3-210ENST00000507771 RPS8P62241 208 aaKnown RBP13.87□□□□□ -0.19
ITGA3-210ENST00000507771 GPR162Q16538 588 aa13.87□□□□□ -0.19
ITGA3-210ENST00000507771 GRIPAP1Q4V328 841 aa13.87□□□□□ -0.19
ITGA3-210ENST00000507771 PRPF40BQ6NWY9 871 aaKnown RBP13.87□□□□□ -0.19
ITGA3-210ENST00000507771 ANKRD44Q8N8A2 993 aa13.87□□□□□ -0.19
ITGA3-210ENST00000507771 KAZALD1Q96I82 304 aa13.87□□□□□ -0.19
ITGA3-210ENST00000507771 C1orf115Q9H7X2 142 aa13.87□□□□□ -0.19
ITGA3-210ENST00000507771 SEC31BQ9NQW1 1179 aa13.87□□□□□ -0.19
ITGA3-210ENST00000507771 COL11A2P13942 1736 aaPredicted RBP13.87□□□□□ -0.19
ITGA3-210ENST00000507771 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
ITGA3-210ENST00000507771 HMMRO75330 724 aa13.86□□□□□ -0.19
ITGA3-210ENST00000507771 CC2D2BQ6DHV5 1058 aa13.86□□□□□ -0.19
ITGA3-210ENST00000507771 RPAP2Q8IXW5 612 aaPredicted RBP13.86□□□□□ -0.19
ITGA3-210ENST00000507771 MTX1Q13505 466 aa13.85□□□□□ -0.19
ITGA3-210ENST00000507771 CELF1Q92879 486 aaKnown RBP13.85□□□□□ -0.19
ITGA3-210ENST00000507771 CNNM1Q9NRU3 951 aa13.85□□□□□ -0.19
ITGA3-210ENST00000507771 WWC3Q9ULE0 1092 aa13.85□□□□□ -0.19
ITGA3-210ENST00000507771 KIAA1551Q9HCM1 1747 aa13.84□□□□□ -0.19
ITGA3-210ENST00000507771 GRIN3BO60391 1043 aa13.84□□□□□ -0.19
ITGA3-210ENST00000507771 IRX6P78412 446 aaPredicted RBP13.84□□□□□ -0.19
ITGA3-210ENST00000507771 ATP8B2P98198 1209 aa13.84□□□□□ -0.19
ITGA3-210ENST00000507771 CCDC93Q567U6 631 aa13.84□□□□□ -0.19
ITGA3-210ENST00000507771 LDHAL6AQ6ZMR3 332 aa13.84□□□□□ -0.19
ITGA3-210ENST00000507771 SP8Q8IXZ3 490 aa13.84□□□□□ -0.19
ITGA3-210ENST00000507771 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
ITGA3-210ENST00000507771 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
ITGA3-210ENST00000507771 ATP6V0A2Q9Y487 856 aa13.84□□□□□ -0.19
ITGA3-210ENST00000507771 C21orf2O43822 256 aa13.83□□□□□ -0.2
ITGA3-210ENST00000507771 CEP85Q6P2H3 762 aa13.83□□□□□ -0.2
ITGA3-210ENST00000507771 RTKN2Q8IZC4 609 aa13.83□□□□□ -0.2
ITGA3-210ENST00000507771 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.2
ITGA3-210ENST00000507771 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
ITGA3-210ENST00000507771 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
ITGA3-210ENST00000507771 ZNF594Q96JF6 807 aaPredicted RBP13.82□□□□□ -0.2
ITGA3-210ENST00000507771 ANKIB1Q9P2G1 1089 aa13.82□□□□□ -0.2
ITGA3-210ENST00000507771 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.2
ITGA3-210ENST00000507771 OS9Q13438 667 aaPredicted RBP13.81□□□□□ -0.2
ITGA3-210ENST00000507771 DPP8Q6V1X1 898 aaPredicted RBP13.81□□□□□ -0.2
ITGA3-210ENST00000507771 SUPT20HQ8NEM7 779 aa13.81□□□□□ -0.2
ITGA3-210ENST00000507771 SSH3Q8TE77 659 aa13.81□□□□□ -0.2
ITGA3-210ENST00000507771 COPRSQ9NQ92 184 aa13.81□□□□□ -0.2
ITGA3-210ENST00000507771 MROH5Q6ZUA9 1318 aa13.81□□□□□ -0.2
ITGA3-210ENST00000507771 BRCA1P38398 1863 aaKnown RBP13.8□□□□□ -0.2
ITGA3-210ENST00000507771 CACNA1SQ13698 1873 aa13.8□□□□□ -0.2
ITGA3-210ENST00000507771 PNMA6EA0A0J9YXQ4 647 aa13.8□□□□□ -0.2
ITGA3-210ENST00000507771 EYA2O00167 538 aa13.8□□□□□ -0.2
ITGA3-210ENST00000507771 CIAO1O76071 339 aa13.8□□□□□ -0.2
ITGA3-210ENST00000507771 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
ITGA3-210ENST00000507771 KCNJ4P48050 445 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms