RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 GRAPQ13588 217 aa21.13■□□□□ 0.97
SNX2-205ENST00000506874 USP50Q70EL3 339 aaPredicted RBP21.13■□□□□ 0.97
SNX2-205ENST00000506874 GRAPLQ8TC17 118 aaPredicted RBP21.13■□□□□ 0.97
SNX2-205ENST00000506874 RTFDC1Q9BY42 306 aaPredicted RBP21.13■□□□□ 0.97
SNX2-205ENST00000506874 VPS33BQ9H267 617 aa21.13■□□□□ 0.97
SNX2-205ENST00000506874 ATP5J2-PTCD1G3V325 749 aa21.12■□□□□ 0.97
SNX2-205ENST00000506874 ANKRD13DQ6ZTN6 518 aa21.12■□□□□ 0.97
SNX2-205ENST00000506874 PLBD2Q8NHP8 589 aa21.12■□□□□ 0.97
SNX2-205ENST00000506874 GPRC5DQ9NZD1 345 aa21.12■□□□□ 0.97
SNX2-205ENST00000506874 TRAF5O00463 557 aa21.11■□□□□ 0.97
SNX2-205ENST00000506874 RAD17O75943 681 aa21.11■□□□□ 0.97
SNX2-205ENST00000506874 GMPSP49915 693 aaPredicted RBP21.11■□□□□ 0.97
SNX2-205ENST00000506874 PAXIP1Q6ZW49 1069 aaPredicted RBP21.11■□□□□ 0.97
SNX2-205ENST00000506874 FAM89AQ96GI7 184 aa21.11■□□□□ 0.97
SNX2-205ENST00000506874 WDR33Q9C0J8 1336 aaKnown RBP21.1■□□□□ 0.97
SNX2-205ENST00000506874 TRPM7Q96QT4 1865 aa21.1■□□□□ 0.97
SNX2-205ENST00000506874 CTCFP49711 727 aaPredicted RBP21.1■□□□□ 0.97
SNX2-205ENST00000506874 KIAA2012Q0VF49 1180 aa21.1■□□□□ 0.97
SNX2-205ENST00000506874 RTL5Q5HYW3 569 aaPredicted RBP21.1■□□□□ 0.97
SNX2-205ENST00000506874 DUSP27Q5VZP5 1158 aa21.1■□□□□ 0.97
SNX2-205ENST00000506874 CIAPIN1Q6FI81 312 aa21.1■□□□□ 0.97
SNX2-205ENST00000506874 BCL2L13Q9BXK5 485 aa21.1■□□□□ 0.97
SNX2-205ENST00000506874 ADARB2Q9NS39 739 aaKnown RBP21.1■□□□□ 0.97
SNX2-205ENST00000506874 DBF4Q9UBU7 674 aaPredicted RBP21.1■□□□□ 0.97
SNX2-205ENST00000506874 DDX60Q8IY21 1712 aaKnown RBP21.09■□□□□ 0.97
SNX2-205ENST00000506874 HOXB7P09629 217 aa21.09■□□□□ 0.97
SNX2-205ENST00000506874 GRM1Q13255 1194 aa21.09■□□□□ 0.97
SNX2-205ENST00000506874 CFAP44Q96MT7 982 aa21.09■□□□□ 0.97
SNX2-205ENST00000506874 ISCA1Q9BUE6 129 aa21.09■□□□□ 0.97
SNX2-205ENST00000506874 MBIPQ9NS73 344 aa21.09■□□□□ 0.97
SNX2-205ENST00000506874 WBP1LQ9NX94 342 aa21.09■□□□□ 0.97
SNX2-205ENST00000506874 PRDM10Q9NQV6 1147 aa21.08■□□□□ 0.97
SNX2-205ENST00000506874 HYPKQ9NX55 129 aa21.08■□□□□ 0.97
SNX2-205ENST00000506874 LBX1P52954 281 aa21.07■□□□□ 0.96
SNX2-205ENST00000506874 TNIP1Q15025 636 aa21.07■□□□□ 0.96
SNX2-205ENST00000506874 CELF1Q92879 486 aaKnown RBP21.07■□□□□ 0.96
SNX2-205ENST00000506874 CST9Q5W186 159 aa21.06■□□□□ 0.96
SNX2-205ENST00000506874 TMC4Q7Z404 712 aa21.06■□□□□ 0.96
SNX2-205ENST00000506874 CAPNS2Q96L46 248 aa21.06■□□□□ 0.96
SNX2-205ENST00000506874 YDJCA8MPS7 323 aa21.05■□□□□ 0.96
SNX2-205ENST00000506874 ELL2O00472 640 aaPredicted RBP21.05■□□□□ 0.96
SNX2-205ENST00000506874 CYP4F22Q6NT55 531 aa21.05■□□□□ 0.96
SNX2-205ENST00000506874 GLIS2Q9BZE0 524 aaPredicted RBP21.05■□□□□ 0.96
SNX2-205ENST00000506874 NSFL1CQ9UNZ2 370 aaKnown RBP21.05■□□□□ 0.96
SNX2-205ENST00000506874 DUOX1Q9NRD9 1551 aa21.05■□□□□ 0.96
SNX2-205ENST00000506874 SHTN1A0MZ66 631 aa21.04■□□□□ 0.96
SNX2-205ENST00000506874 IRS4O14654 1257 aaPredicted RBP21.04■□□□□ 0.96
SNX2-205ENST00000506874 APAF1O14727 1248 aa21.04■□□□□ 0.96
SNX2-205ENST00000506874 RIMBP2O15034 1052 aa21.04■□□□□ 0.96
SNX2-205ENST00000506874 MAP2K1Q02750 393 aaPredicted RBP21.04■□□□□ 0.96
SNX2-205ENST00000506874 SF3B3Q15393 1217 aaKnown RBP21.04■□□□□ 0.96
SNX2-205ENST00000506874 RIC3Q7Z5B4 369 aa21.04■□□□□ 0.96
SNX2-205ENST00000506874 C6orf229H3BNL8 230 aa21.03■□□□□ 0.96
SNX2-205ENST00000506874 CELF2O95319 508 aaKnown RBP21.03■□□□□ 0.96
SNX2-205ENST00000506874 ECE1P42892 770 aa21.03■□□□□ 0.96
SNX2-205ENST00000506874 WASHC4Q2M389 1173 aa21.03■□□□□ 0.96
SNX2-205ENST00000506874 TRPM4Q8TD43 1214 aa21.03■□□□□ 0.96
SNX2-205ENST00000506874 PHAXQ9H814 394 aaKnown RBP21.03■□□□□ 0.96
SNX2-205ENST00000506874 DBNDD1Q9H9R9 158 aa21.03■□□□□ 0.96
SNX2-205ENST00000506874 CNOT7Q9UIV1 285 aaKnown RBP21.03■□□□□ 0.96
SNX2-205ENST00000506874 LRRC37AA6NMS7 1700 aa21.03■□□□□ 0.96
SNX2-205ENST00000506874 COL4A1P02462 1669 aa21.02■□□□□ 0.96
SNX2-205ENST00000506874 ZNF853P0CG23 659 aa21.02■□□□□ 0.96
SNX2-205ENST00000506874 HSPA8P11142 646 aaKnown RBP21.02■□□□□ 0.96
SNX2-205ENST00000506874 HIRAP54198 1017 aaPredicted RBP21.02■□□□□ 0.96
SNX2-205ENST00000506874 GPSM2P81274 684 aa21.02■□□□□ 0.96
SNX2-205ENST00000506874 GOLGA2Q08379 1002 aa21.02■□□□□ 0.96
SNX2-205ENST00000506874 ZNF408Q9H9D4 720 aa21.02■□□□□ 0.96
SNX2-205ENST00000506874 ZBTB12Q9Y330 459 aaPredicted RBP21.02■□□□□ 0.96
SNX2-205ENST00000506874 TLL2Q9Y6L7 1015 aa21.02■□□□□ 0.96
SNX2-205ENST00000506874 H7C1D1 291 aa21.01■□□□□ 0.95
SNX2-205ENST00000506874 ANP32CO43423 234 aa21.01■□□□□ 0.95
SNX2-205ENST00000506874 GNAI1P63096 354 aa21.01■□□□□ 0.95
SNX2-205ENST00000506874 MICALL2Q8IY33 904 aa21.01■□□□□ 0.95
SNX2-205ENST00000506874 GPR101Q96P66 508 aaPredicted RBP21.01■□□□□ 0.95
SNX2-205ENST00000506874 IFT57Q9NWB7 429 aa21.01■□□□□ 0.95
SNX2-205ENST00000506874 POLLQ9UGP5 575 aa21.01■□□□□ 0.95
SNX2-205ENST00000506874 CDHR2Q9BYE9 1310 aa21.01■□□□□ 0.95
SNX2-205ENST00000506874 PSMD14O00487 310 aa21■□□□□ 0.95
SNX2-205ENST00000506874 TRIM28Q13263 835 aaKnown RBP21■□□□□ 0.95
SNX2-205ENST00000506874 MYD88Q99836 296 aa21■□□□□ 0.95
SNX2-205ENST00000506874 AOC2O75106 756 aa20.99■□□□□ 0.95
SNX2-205ENST00000506874 RPS8P62241 208 aaKnown RBP20.99■□□□□ 0.95
SNX2-205ENST00000506874 DOK7Q18PE1 504 aa20.99■□□□□ 0.95
SNX2-205ENST00000506874 JARID2Q92833 1246 aaPredicted RBP20.99■□□□□ 0.95
SNX2-205ENST00000506874 BEGAINQ9BUH8 593 aa20.99■□□□□ 0.95
SNX2-205ENST00000506874 SEC31BQ9NQW1 1179 aa20.99■□□□□ 0.95
SNX2-205ENST00000506874 PGAP2Q9UHJ9 254 aa20.99■□□□□ 0.95
SNX2-205ENST00000506874 CALD1Q05682 793 aaKnown RBP20.98■□□□□ 0.95
SNX2-205ENST00000506874 SAMD7Q7Z3H4 446 aa20.98■□□□□ 0.95
SNX2-205ENST00000506874 ZBTB38Q8NAP3 1195 aaPredicted RBP20.98■□□□□ 0.95
SNX2-205ENST00000506874 C8orf58Q8NAV2 365 aa20.98■□□□□ 0.95
SNX2-205ENST00000506874 ZC3H15Q8WU90 426 aaKnown RBP20.98■□□□□ 0.95
SNX2-205ENST00000506874 KCNQ5Q9NR82 932 aa20.98■□□□□ 0.95
SNX2-205ENST00000506874 ECE2O60344 883 aa20.97■□□□□ 0.95
SNX2-205ENST00000506874 CCDC184Q52MB2 194 aa20.97■□□□□ 0.95
SNX2-205ENST00000506874 CDC37L1Q7L3B6 337 aa20.97■□□□□ 0.95
SNX2-205ENST00000506874 SAPCD2Q86UD0 394 aa20.97■□□□□ 0.95
SNX2-205ENST00000506874 USP48Q86UV5 1035 aa20.97■□□□□ 0.95
SNX2-205ENST00000506874 CCDC85AQ96PX6 553 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms