RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 DDX46Q7L014 1031 aaKnown RBP23.17■■□□□ 1.3
PDLIM7-216ENST00000506537 CCDC88AQ3V6T2 1871 aa23.17■■□□□ 1.3
PDLIM7-216ENST00000506537 LTBP3Q9NS15 1303 aa23.16■■□□□ 1.3
PDLIM7-216ENST00000506537 GRAPQ13588 217 aa23.16■■□□□ 1.3
PDLIM7-216ENST00000506537 GRAPLQ8TC17 118 aaPredicted RBP23.16■■□□□ 1.3
PDLIM7-216ENST00000506537 NOB1Q9ULX3 412 aaKnown RBP23.16■■□□□ 1.3
PDLIM7-216ENST00000506537 LRRC37AA6NMS7 1700 aa23.16■■□□□ 1.3
PDLIM7-216ENST00000506537 ALDH1L1O75891 902 aa23.15■■□□□ 1.3
PDLIM7-216ENST00000506537 HSP90B1P14625 803 aaKnown RBP23.15■■□□□ 1.3
PDLIM7-216ENST00000506537 CTSWP56202 376 aa23.15■■□□□ 1.3
PDLIM7-216ENST00000506537 CELF1Q92879 486 aaKnown RBP23.15■■□□□ 1.3
PDLIM7-216ENST00000506537 SRCIN1Q9C0H9 1055 aa23.15■■□□□ 1.3
PDLIM7-216ENST00000506537 TAOK3Q9H2K8 898 aa23.15■■□□□ 1.3
PDLIM7-216ENST00000506537 RNF181Q9P0P0 153 aa23.15■■□□□ 1.3
PDLIM7-216ENST00000506537 TIAM2Q8IVF5 1701 aa23.15■■□□□ 1.3
PDLIM7-216ENST00000506537 LMNB1P20700 586 aa23.14■■□□□ 1.29
PDLIM7-216ENST00000506537 IFFO2Q5TF58 517 aa23.14■■□□□ 1.29
PDLIM7-216ENST00000506537 CCDC85AQ96PX6 553 aaPredicted RBP23.14■■□□□ 1.29
PDLIM7-216ENST00000506537 PLA2G12BQ9BX93 195 aa23.14■■□□□ 1.29
PDLIM7-216ENST00000506537 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.29
PDLIM7-216ENST00000506537 BCAR3O75815 825 aa23.13■■□□□ 1.29
PDLIM7-216ENST00000506537 ATP6V0A2Q9Y487 856 aa23.13■■□□□ 1.29
PDLIM7-216ENST00000506537 DICER1Q9UPY3 1922 aaKnown RBP23.12■■□□□ 1.29
PDLIM7-216ENST00000506537 GRM8O00222 908 aa23.12■■□□□ 1.29
PDLIM7-216ENST00000506537 BBOX1O75936 387 aa23.12■■□□□ 1.29
PDLIM7-216ENST00000506537 FKBP4Q02790 459 aaKnown RBP eCLIP23.12■■□□□ 1.29
PDLIM7-216ENST00000506537 CCDC152Q4G0S7 254 aa23.12■■□□□ 1.29
PDLIM7-216ENST00000506537 TTLL11Q8NHH1 800 aa23.12■■□□□ 1.29
PDLIM7-216ENST00000506537 KIF16BQ96L93 1317 aa23.11■■□□□ 1.29
PDLIM7-216ENST00000506537 CC2D2BQ6DHV5 1058 aa23.11■■□□□ 1.29
PDLIM7-216ENST00000506537 RTKN2Q8IZC4 609 aa23.11■■□□□ 1.29
PDLIM7-216ENST00000506537 GREM2Q9H772 168 aa23.1■■□□□ 1.29
PDLIM7-216ENST00000506537 RTL9Q8NET4 1388 aa23.1■■□□□ 1.29
PDLIM7-216ENST00000506537 DUOX1Q9NRD9 1551 aa23.1■■□□□ 1.29
PDLIM7-216ENST00000506537 SP8Q8IXZ3 490 aa23.09■■□□□ 1.29
PDLIM7-216ENST00000506537 PSMD1Q99460 953 aa23.09■■□□□ 1.29
PDLIM7-216ENST00000506537 API5Q9BZZ5 524 aaKnown RBP23.09■■□□□ 1.29
PDLIM7-216ENST00000506537 ZNF277Q9NRM2 450 aaPredicted RBP23.09■■□□□ 1.29
PDLIM7-216ENST00000506537 UTYO14607 1347 aa23.08■■□□□ 1.29
PDLIM7-216ENST00000506537 LTBP1Q14766 1721 aa23.08■■□□□ 1.29
PDLIM7-216ENST00000506537 SPEF2Q9C093 1822 aa23.08■■□□□ 1.29
PDLIM7-216ENST00000506537 FOXO4P98177 505 aa23.08■■□□□ 1.29
PDLIM7-216ENST00000506537 EPHA10Q5JZY3 1008 aa23.08■■□□□ 1.29
PDLIM7-216ENST00000506537 C9orf78Q9NZ63 289 aaPredicted RBP23.08■■□□□ 1.29
PDLIM7-216ENST00000506537 COL4A5P29400 1685 aa23.07■■□□□ 1.28
PDLIM7-216ENST00000506537 CSF1RP07333 972 aa23.07■■□□□ 1.28
PDLIM7-216ENST00000506537 NBPF7P0C2Y1 421 aaPredicted RBP23.07■■□□□ 1.28
PDLIM7-216ENST00000506537 RPS8P62241 208 aaKnown RBP23.07■■□□□ 1.28
PDLIM7-216ENST00000506537 FAM161AQ3B820 660 aa23.07■■□□□ 1.28
PDLIM7-216ENST00000506537 TMC4Q7Z404 712 aa23.07■■□□□ 1.28
PDLIM7-216ENST00000506537 ARHGAP45Q92619 1136 aa23.07■■□□□ 1.28
PDLIM7-216ENST00000506537 TNNQ9UQP3 1299 aa23.07■■□□□ 1.28
PDLIM7-216ENST00000506537 KAZALD1Q96I82 304 aa23.06■■□□□ 1.28
PDLIM7-216ENST00000506537 SUCLG2Q96I99 432 aa23.06■■□□□ 1.28
PDLIM7-216ENST00000506537 TRIM27P14373 513 aa23.05■■□□□ 1.28
PDLIM7-216ENST00000506537 GRIPAP1Q4V328 841 aa23.05■■□□□ 1.28
PDLIM7-216ENST00000506537 ZC3H4Q9UPT8 1303 aaKnown RBP23.05■■□□□ 1.28
PDLIM7-216ENST00000506537 CCT4P50991 539 aaKnown RBP23.04■■□□□ 1.28
PDLIM7-216ENST00000506537 ZNF526Q8TF50 670 aaPredicted RBP23.04■■□□□ 1.28
PDLIM7-216ENST00000506537 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
PDLIM7-216ENST00000506537 RTFDC1Q9BY42 306 aaPredicted RBP23.04■■□□□ 1.28
PDLIM7-216ENST00000506537 USP44Q9H0E7 712 aa23.04■■□□□ 1.28
PDLIM7-216ENST00000506537 ITGA6P23229 1130 aa23.03■■□□□ 1.28
PDLIM7-216ENST00000506537 IARSP41252 1262 aaKnown RBP23.03■■□□□ 1.28
PDLIM7-216ENST00000506537 ATF7IPQ6VMQ6 1270 aa23.03■■□□□ 1.28
PDLIM7-216ENST00000506537 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
PDLIM7-216ENST00000506537 MPNDQ8N594 471 aa23.03■■□□□ 1.28
PDLIM7-216ENST00000506537 TMX4Q9H1E5 349 aaPredicted RBP23.03■■□□□ 1.28
PDLIM7-216ENST00000506537 GPSM2P81274 684 aa23.02■■□□□ 1.28
PDLIM7-216ENST00000506537 LMBR1LQ6UX01 489 aa23.02■■□□□ 1.28
PDLIM7-216ENST00000506537 DPP8Q6V1X1 898 aaPredicted RBP23.02■■□□□ 1.28
PDLIM7-216ENST00000506537 CDC5LQ99459 802 aaKnown RBP23.02■■□□□ 1.28
PDLIM7-216ENST00000506537 IPO8O15397 1037 aaKnown RBP23.01■■□□□ 1.27
PDLIM7-216ENST00000506537 INTS3Q68E01 1043 aaKnown RBP23■■□□□ 1.27
PDLIM7-216ENST00000506537 ANKRD44Q8N8A2 993 aa23■■□□□ 1.27
PDLIM7-216ENST00000506537 BICC1Q9H694 974 aaKnown RBP23■■□□□ 1.27
PDLIM7-216ENST00000506537 ZKSCAN2Q63HK3 967 aa22.99■■□□□ 1.27
PDLIM7-216ENST00000506537 YTHDC1Q96MU7 727 aaKnown RBP22.99■■□□□ 1.27
PDLIM7-216ENST00000506537 NSFL1CQ9UNZ2 370 aaKnown RBP22.99■■□□□ 1.27
PDLIM7-216ENST00000506537 CHMP3Q9Y3E7 222 aa22.99■■□□□ 1.27
PDLIM7-216ENST00000506537 AOC3Q16853 763 aa22.98■■□□□ 1.27
PDLIM7-216ENST00000506537 RABL6Q3YEC7 729 aaPredicted RBP22.98■■□□□ 1.27
PDLIM7-216ENST00000506537 CLUAP1Q96AJ1 413 aa22.98■■□□□ 1.27
PDLIM7-216ENST00000506537 GPBP1L1Q9HC44 474 aaPredicted RBP22.98■■□□□ 1.27
PDLIM7-216ENST00000506537 BSDC1Q9NW68 430 aaPredicted RBP22.98■■□□□ 1.27
PDLIM7-216ENST00000506537 POLLQ9UGP5 575 aa22.98■■□□□ 1.27
PDLIM7-216ENST00000506537 ANKRD18BA2A2Z9 1011 aa22.97■■□□□ 1.27
PDLIM7-216ENST00000506537 PPIP5K2O43314 1243 aa22.97■■□□□ 1.27
PDLIM7-216ENST00000506537 LARGE2Q8N3Y3 721 aa22.97■■□□□ 1.27
PDLIM7-216ENST00000506537 SUPT20HQ8NEM7 779 aa22.97■■□□□ 1.27
PDLIM7-216ENST00000506537 PODXL2Q9NZ53 605 aa22.97■■□□□ 1.27
PDLIM7-216ENST00000506537 ZNF541Q9H0D2 1346 aa22.97■■□□□ 1.27
PDLIM7-216ENST00000506537 A0A1B0GUL6 1792 aa22.96■■□□□ 1.27
PDLIM7-216ENST00000506537 GLTPD2A6NH11 291 aa22.96■■□□□ 1.27
PDLIM7-216ENST00000506537 IGHMBP2P38935 993 aaKnown RBP22.96■■□□□ 1.27
PDLIM7-216ENST00000506537 IFIT5Q13325 482 aaKnown RBP22.96■■□□□ 1.27
PDLIM7-216ENST00000506537 TBC1D16Q8TBP0 767 aa22.96■■□□□ 1.27
PDLIM7-216ENST00000506537 GPR101Q96P66 508 aaPredicted RBP22.96■■□□□ 1.27
PDLIM7-216ENST00000506537 MEIS3Q99687 375 aa22.96■■□□□ 1.27
PDLIM7-216ENST00000506537 MINPP1Q9UNW1 487 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 434.9 ms