RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 MPNDQ8N594 471 aa22.28■■□□□ 1.16
AP3S1-204ENST00000506430 RTFDC1Q9BY42 306 aaPredicted RBP22.28■■□□□ 1.16
AP3S1-204ENST00000506430 TAF1P21675 1872 aa22.27■■□□□ 1.16
AP3S1-204ENST00000506430 NCBP3Q53F19 620 aaKnown RBP22.27■■□□□ 1.16
AP3S1-204ENST00000506430 LDHDQ86WU2 507 aa22.27■■□□□ 1.16
AP3S1-204ENST00000506430 ZBTB38Q8NAP3 1195 aaPredicted RBP22.27■■□□□ 1.16
AP3S1-204ENST00000506430 JARID2Q92833 1246 aaPredicted RBP22.27■■□□□ 1.16
AP3S1-204ENST00000506430 CELF1Q92879 486 aaKnown RBP22.27■■□□□ 1.16
AP3S1-204ENST00000506430 DDX60Q8IY21 1712 aaKnown RBP22.26■■□□□ 1.15
AP3S1-204ENST00000506430 TWISTNBQ3B726 338 aaPredicted RBP22.26■■□□□ 1.15
AP3S1-204ENST00000506430 NIM1KQ8IY84 436 aa22.26■■□□□ 1.15
AP3S1-204ENST00000506430 METTL22Q9BUU2 404 aaPredicted RBP22.26■■□□□ 1.15
AP3S1-204ENST00000506430 CHMP4AQ9BY43 222 aa22.26■■□□□ 1.15
AP3S1-204ENST00000506430 SCN4AP35499 1836 aa22.26■■□□□ 1.15
AP3S1-204ENST00000506430 IL16Q14005 1332 aa22.26■■□□□ 1.15
AP3S1-204ENST00000506430 CCDC191Q8NCU4 936 aa22.25■■□□□ 1.15
AP3S1-204ENST00000506430 SUPT20HQ8NEM7 779 aa22.25■■□□□ 1.15
AP3S1-204ENST00000506430 VPS33BQ9H267 617 aa22.25■■□□□ 1.15
AP3S1-204ENST00000506430 MAP3K2Q9Y2U5 619 aa22.25■■□□□ 1.15
AP3S1-204ENST00000506430 PI4KAP2A4QPH2 592 aa22.24■■□□□ 1.15
AP3S1-204ENST00000506430 DDX58O95786 925 aaKnown RBP22.24■■□□□ 1.15
AP3S1-204ENST00000506430 G2E3Q7L622 706 aa22.24■■□□□ 1.15
AP3S1-204ENST00000506430 PI4KAP1Q8N8J0 262 aa22.24■■□□□ 1.15
AP3S1-204ENST00000506430 CLEC11AQ9Y240 323 aa22.24■■□□□ 1.15
AP3S1-204ENST00000506430 COL4A1P02462 1669 aa22.23■■□□□ 1.15
AP3S1-204ENST00000506430 EPS15P42566 896 aa22.23■■□□□ 1.15
AP3S1-204ENST00000506430 SCNN1DP51172 638 aa22.23■■□□□ 1.15
AP3S1-204ENST00000506430 KSR2Q6VAB6 950 aa22.23■■□□□ 1.15
AP3S1-204ENST00000506430 TMC4Q7Z404 712 aa22.23■■□□□ 1.15
AP3S1-204ENST00000506430 FAM9BQ8IZU0 186 aa22.23■■□□□ 1.15
AP3S1-204ENST00000506430 STK31Q9BXU1 1019 aa22.23■■□□□ 1.15
AP3S1-204ENST00000506430 CWC25Q9NXE8 425 aaPredicted RBP22.23■■□□□ 1.15
AP3S1-204ENST00000506430 ZNRF3Q9ULT6 936 aa22.23■■□□□ 1.15
AP3S1-204ENST00000506430 FANCIQ9NVI1 1328 aa22.23■■□□□ 1.15
AP3S1-204ENST00000506430 SLC4A2P04920 1241 aa22.22■■□□□ 1.15
AP3S1-204ENST00000506430 PCCAP05165 728 aaPredicted RBP22.22■■□□□ 1.15
AP3S1-204ENST00000506430 KIAA2012Q0VF49 1180 aa22.22■■□□□ 1.15
AP3S1-204ENST00000506430 PNMA8AQ86V59 439 aaPredicted RBP22.22■■□□□ 1.15
AP3S1-204ENST00000506430 JMYQ8N9B5 988 aa22.22■■□□□ 1.15
AP3S1-204ENST00000506430 ITGBL1O95965 494 aaPredicted RBP22.21■■□□□ 1.15
AP3S1-204ENST00000506430 CXCL9Q07325 125 aa22.21■■□□□ 1.15
AP3S1-204ENST00000506430 WDR63Q8IWG1 891 aa22.21■■□□□ 1.15
AP3S1-204ENST00000506430 SEC31BQ9NQW1 1179 aa22.21■■□□□ 1.15
AP3S1-204ENST00000506430 NSFL1CQ9UNZ2 370 aaKnown RBP22.21■■□□□ 1.15
AP3S1-204ENST00000506430 PASKQ96RG2 1323 aa22.21■■□□□ 1.15
AP3S1-204ENST00000506430 IGKV5-2P06315 115 aa22.2■■□□□ 1.14
AP3S1-204ENST00000506430 RPS8P62241 208 aaKnown RBP22.2■■□□□ 1.14
AP3S1-204ENST00000506430 MAP1SQ66K74 1059 aaPredicted RBP22.2■■□□□ 1.14
AP3S1-204ENST00000506430 CCDC85AQ96PX6 553 aaPredicted RBP22.2■■□□□ 1.14
AP3S1-204ENST00000506430 SPINK5Q9NQ38 1064 aaPredicted RBP22.2■■□□□ 1.14
AP3S1-204ENST00000506430 LMOD1P29536 600 aaPredicted RBP22.19■■□□□ 1.14
AP3S1-204ENST00000506430 GPSM2P81274 684 aa22.19■■□□□ 1.14
AP3S1-204ENST00000506430 LTBP1Q14766 1721 aa22.19■■□□□ 1.14
AP3S1-204ENST00000506430 DUOX1Q9NRD9 1551 aa22.18■■□□□ 1.14
AP3S1-204ENST00000506430 PDE8AO60658 829 aa22.18■■□□□ 1.14
AP3S1-204ENST00000506430 VAMP4O75379 141 aa22.18■■□□□ 1.14
AP3S1-204ENST00000506430 CWF19L2Q2TBE0 894 aaKnown RBP22.18■■□□□ 1.14
AP3S1-204ENST00000506430 CNTROBQ8N137 903 aa22.18■■□□□ 1.14
AP3S1-204ENST00000506430 CREBZFQ9NS37 354 aa22.18■■□□□ 1.14
AP3S1-204ENST00000506430 POLLQ9UGP5 575 aa22.18■■□□□ 1.14
AP3S1-204ENST00000506430 ADAMTSL1Q8N6G6 1762 aa22.17■■□□□ 1.14
AP3S1-204ENST00000506430 YDJCA8MPS7 323 aa22.17■■□□□ 1.14
AP3S1-204ENST00000506430 RAD17O75943 681 aa22.17■■□□□ 1.14
AP3S1-204ENST00000506430 HSP90B1P14625 803 aaKnown RBP22.17■■□□□ 1.14
AP3S1-204ENST00000506430 EXOSC9Q06265 439 aaKnown RBP22.17■■□□□ 1.14
AP3S1-204ENST00000506430 RIMBP2O15034 1052 aa22.16■■□□□ 1.14
AP3S1-204ENST00000506430 WASHC4Q2M389 1173 aa22.16■■□□□ 1.14
AP3S1-204ENST00000506430 CCDC152Q4G0S7 254 aa22.16■■□□□ 1.14
AP3S1-204ENST00000506430 CIAPIN1Q6FI81 312 aa22.16■■□□□ 1.14
AP3S1-204ENST00000506430 GPRC5DQ9NZD1 345 aa22.16■■□□□ 1.14
AP3S1-204ENST00000506430 LRRC37AA6NMS7 1700 aa22.15■■□□□ 1.14
AP3S1-204ENST00000506430 C6orf229H3BNL8 230 aa22.15■■□□□ 1.14
AP3S1-204ENST00000506430 GMPSP49915 693 aaPredicted RBP22.15■■□□□ 1.14
AP3S1-204ENST00000506430 NEXNQ0ZGT2 675 aa22.15■■□□□ 1.14
AP3S1-204ENST00000506430 FLIIQ13045 1269 aa22.15■■□□□ 1.14
AP3S1-204ENST00000506430 GPR101Q96P66 508 aaPredicted RBP22.15■■□□□ 1.14
AP3S1-204ENST00000506430 MKRN1Q9UHC7 482 aaKnown RBP22.15■■□□□ 1.14
AP3S1-204ENST00000506430 CDHR2Q9BYE9 1310 aa22.14■■□□□ 1.14
AP3S1-204ENST00000506430 NEURL1BA8MQ27 555 aa22.14■■□□□ 1.13
AP3S1-204ENST00000506430 USP50Q70EL3 339 aaPredicted RBP22.14■■□□□ 1.13
AP3S1-204ENST00000506430 TBC1D16Q8TBP0 767 aa22.14■■□□□ 1.13
AP3S1-204ENST00000506430 DBNDD1Q9H9R9 158 aa22.14■■□□□ 1.13
AP3S1-204ENST00000506430 TMEM88BA6NKF7 163 aa22.12■■□□□ 1.13
AP3S1-204ENST00000506430 FKBP5Q13451 457 aaPredicted RBP22.12■■□□□ 1.13
AP3S1-204ENST00000506430 TNIP1Q15025 636 aa22.12■■□□□ 1.13
AP3S1-204ENST00000506430 DOK7Q18PE1 504 aa22.12■■□□□ 1.13
AP3S1-204ENST00000506430 ADARB2Q9NS39 739 aaKnown RBP22.12■■□□□ 1.13
AP3S1-204ENST00000506430 H7C1W4 665 aa22.11■■□□□ 1.13
AP3S1-204ENST00000506430 CTSWP56202 376 aa22.11■■□□□ 1.13
AP3S1-204ENST00000506430 FMR1Q06787 632 aaKnown RBP eCLIP22.11■■□□□ 1.13
AP3S1-204ENST00000506430 TTLL11Q8NHH1 800 aa22.11■■□□□ 1.13
AP3S1-204ENST00000506430 BCL2L13Q9BXK5 485 aa22.11■■□□□ 1.13
AP3S1-204ENST00000506430 KCNQ5Q9NR82 932 aa22.11■■□□□ 1.13
AP3S1-204ENST00000506430 PODXL2Q9NZ53 605 aa22.11■■□□□ 1.13
AP3S1-204ENST00000506430 ANKIB1Q9P2G1 1089 aa22.11■■□□□ 1.13
AP3S1-204ENST00000506430 SHTN1A0MZ66 631 aa22.1■■□□□ 1.13
AP3S1-204ENST00000506430 UBE3BQ7Z3V4 1068 aa22.1■■□□□ 1.13
AP3S1-204ENST00000506430 DNAAF4Q8WXU2 420 aa22.1■■□□□ 1.13
AP3S1-204ENST00000506430 GREM2Q9H772 168 aa22.1■■□□□ 1.13
AP3S1-204ENST00000506430 ZBTB12Q9Y330 459 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms