RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 CELF1Q92879 486 aaKnown RBP18.6■□□□□ 0.57
CDC42SE2-209ENST00000506419 TMX4Q9H1E5 349 aaPredicted RBP18.6■□□□□ 0.57
CDC42SE2-209ENST00000506419 VPS33BQ9H267 617 aa18.6■□□□□ 0.57
CDC42SE2-209ENST00000506419 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
CDC42SE2-209ENST00000506419 EAPPQ56P03 285 aaPredicted RBP18.59■□□□□ 0.57
CDC42SE2-209ENST00000506419 DPP8Q6V1X1 898 aaPredicted RBP18.59■□□□□ 0.57
CDC42SE2-209ENST00000506419 ZBTB38Q8NAP3 1195 aaPredicted RBP18.59■□□□□ 0.57
CDC42SE2-209ENST00000506419 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
CDC42SE2-209ENST00000506419 EPS15P42566 896 aa18.58■□□□□ 0.56
CDC42SE2-209ENST00000506419 NIM1KQ8IY84 436 aa18.58■□□□□ 0.56
CDC42SE2-209ENST00000506419 METTL22Q9BUU2 404 aaPredicted RBP18.58■□□□□ 0.56
CDC42SE2-209ENST00000506419 CLEC11AQ9Y240 323 aa18.58■□□□□ 0.56
CDC42SE2-209ENST00000506419 PASKQ96RG2 1323 aa18.57■□□□□ 0.56
CDC42SE2-209ENST00000506419 SCNN1DP51172 638 aa18.57■□□□□ 0.56
CDC42SE2-209ENST00000506419 CXCL9Q07325 125 aa18.57■□□□□ 0.56
CDC42SE2-209ENST00000506419 G2E3Q7L622 706 aa18.57■□□□□ 0.56
CDC42SE2-209ENST00000506419 SUPT20HQ8NEM7 779 aa18.57■□□□□ 0.56
CDC42SE2-209ENST00000506419 ZNRF3Q9ULT6 936 aa18.57■□□□□ 0.56
CDC42SE2-209ENST00000506419 IL16Q14005 1332 aa18.56■□□□□ 0.56
CDC42SE2-209ENST00000506419 KIAA2012Q0VF49 1180 aa18.56■□□□□ 0.56
CDC42SE2-209ENST00000506419 KSR2Q6VAB6 950 aa18.56■□□□□ 0.56
CDC42SE2-209ENST00000506419 PNMA8AQ86V59 439 aaPredicted RBP18.56■□□□□ 0.56
CDC42SE2-209ENST00000506419 CCDC191Q8NCU4 936 aa18.56■□□□□ 0.56
CDC42SE2-209ENST00000506419 SEC31BQ9NQW1 1179 aa18.56■□□□□ 0.56
CDC42SE2-209ENST00000506419 MAP3K2Q9Y2U5 619 aa18.56■□□□□ 0.56
CDC42SE2-209ENST00000506419 PI4KAP2A4QPH2 592 aa18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 IGKV5-2P06315 115 aa18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 RPS8P62241 208 aaKnown RBP18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 TWISTNBQ3B726 338 aaPredicted RBP18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 MAP1SQ66K74 1059 aaPredicted RBP18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 TMC4Q7Z404 712 aa18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 PI4KAP1Q8N8J0 262 aa18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 CHMP4AQ9BY43 222 aa18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 ANKRD36CQ5JPF3 1778 aa18.55■□□□□ 0.56
CDC42SE2-209ENST00000506419 DDX58O95786 925 aaKnown RBP18.54■□□□□ 0.56
CDC42SE2-209ENST00000506419 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
CDC42SE2-209ENST00000506419 GPSM2P81274 684 aa18.54■□□□□ 0.56
CDC42SE2-209ENST00000506419 CNTROBQ8N137 903 aa18.54■□□□□ 0.56
CDC42SE2-209ENST00000506419 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
CDC42SE2-209ENST00000506419 CREBZFQ9NS37 354 aa18.54■□□□□ 0.56
CDC42SE2-209ENST00000506419 CWC25Q9NXE8 425 aaPredicted RBP18.54■□□□□ 0.56
CDC42SE2-209ENST00000506419 POLLQ9UGP5 575 aa18.54■□□□□ 0.56
CDC42SE2-209ENST00000506419 NSFL1CQ9UNZ2 370 aaKnown RBP18.54■□□□□ 0.56
CDC42SE2-209ENST00000506419 YDJCA8MPS7 323 aa18.53■□□□□ 0.56
CDC42SE2-209ENST00000506419 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
CDC42SE2-209ENST00000506419 COL4A1P02462 1669 aa18.53■□□□□ 0.56
CDC42SE2-209ENST00000506419 SCN4AP35499 1836 aa18.52■□□□□ 0.56
CDC42SE2-209ENST00000506419 VAMP4O75379 141 aa18.52■□□□□ 0.56
CDC42SE2-209ENST00000506419 RAD17O75943 681 aa18.52■□□□□ 0.56
CDC42SE2-209ENST00000506419 CCDC85AQ96PX6 553 aaPredicted RBP18.52■□□□□ 0.56
CDC42SE2-209ENST00000506419 LAMB2P55268 1798 aa18.52■□□□□ 0.55
CDC42SE2-209ENST00000506419 TAF1P21675 1872 aa18.52■□□□□ 0.55
CDC42SE2-209ENST00000506419 RIMBP2O15034 1052 aa18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 PDE8AO60658 829 aa18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 LMOD1P29536 600 aaPredicted RBP18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 GMPSP49915 693 aaPredicted RBP18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 FMR1Q06787 632 aaKnown RBP eCLIP18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 CIAPIN1Q6FI81 312 aa18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 FAM9BQ8IZU0 186 aa18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 STK31Q9BXU1 1019 aa18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 GPRC5DQ9NZD1 345 aa18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 MKRN1Q9UHC7 482 aaKnown RBP18.51■□□□□ 0.55
CDC42SE2-209ENST00000506419 FANCIQ9NVI1 1328 aa18.5■□□□□ 0.55
CDC42SE2-209ENST00000506419 EXOSC9Q06265 439 aaKnown RBP18.5■□□□□ 0.55
CDC42SE2-209ENST00000506419 WASHC4Q2M389 1173 aa18.5■□□□□ 0.55
CDC42SE2-209ENST00000506419 CWF19L2Q2TBE0 894 aaKnown RBP18.5■□□□□ 0.55
CDC42SE2-209ENST00000506419 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
CDC42SE2-209ENST00000506419 KCNQ5Q9NR82 932 aa18.5■□□□□ 0.55
CDC42SE2-209ENST00000506419 LTBP1Q14766 1721 aa18.49■□□□□ 0.55
CDC42SE2-209ENST00000506419 DDX60Q8IY21 1712 aaKnown RBP18.49■□□□□ 0.55
CDC42SE2-209ENST00000506419 TMEM88BA6NKF7 163 aa18.49■□□□□ 0.55
CDC42SE2-209ENST00000506419 C6orf229H3BNL8 230 aa18.49■□□□□ 0.55
CDC42SE2-209ENST00000506419 IFFO2Q5TF58 517 aa18.49■□□□□ 0.55
CDC42SE2-209ENST00000506419 USP50Q70EL3 339 aaPredicted RBP18.49■□□□□ 0.55
CDC42SE2-209ENST00000506419 TBC1D16Q8TBP0 767 aa18.49■□□□□ 0.55
CDC42SE2-209ENST00000506419 SHTN1A0MZ66 631 aa18.48■□□□□ 0.55
CDC42SE2-209ENST00000506419 NEURL1BA8MQ27 555 aa18.48■□□□□ 0.55
CDC42SE2-209ENST00000506419 H7C1W4 665 aa18.48■□□□□ 0.55
CDC42SE2-209ENST00000506419 HSP90B1P14625 803 aaKnown RBP18.48■□□□□ 0.55
CDC42SE2-209ENST00000506419 HIRAP54198 1017 aaPredicted RBP18.48■□□□□ 0.55
CDC42SE2-209ENST00000506419 CCDC152Q4G0S7 254 aa18.48■□□□□ 0.55
CDC42SE2-209ENST00000506419 FLIIQ13045 1269 aa18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 TNIP1Q15025 636 aa18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 DOK7Q18PE1 504 aa18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 TTLL11Q8NHH1 800 aa18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 DBNDD1Q9H9R9 158 aa18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 ADARB2Q9NS39 739 aaKnown RBP18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 PODXL2Q9NZ53 605 aa18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 ZBTB12Q9Y330 459 aaPredicted RBP18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 ADAMTSL1Q8N6G6 1762 aa18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 CDHR2Q9BYE9 1310 aa18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 DUOX1Q9NRD9 1551 aa18.47■□□□□ 0.55
CDC42SE2-209ENST00000506419 WTIPA6NIX2 430 aaPredicted RBP18.46■□□□□ 0.55
CDC42SE2-209ENST00000506419 CNOT7Q9UIV1 285 aaKnown RBP18.46■□□□□ 0.55
CDC42SE2-209ENST00000506419 TRAF5O00463 557 aa18.45■□□□□ 0.54
CDC42SE2-209ENST00000506419 PSMD14O00487 310 aa18.45■□□□□ 0.54
CDC42SE2-209ENST00000506419 NEXNQ0ZGT2 675 aa18.45■□□□□ 0.54
CDC42SE2-209ENST00000506419 COL13A1Q5TAT6 717 aaPredicted RBP18.45■□□□□ 0.54
CDC42SE2-209ENST00000506419 BCL2L13Q9BXK5 485 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms