RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 RRAGCQ9HB90 399 aa19.85■□□□□ 0.77
MED28-204ENST00000506409 NEURL1BA8MQ27 555 aa19.84■□□□□ 0.77
MED28-204ENST00000506409 SLFN5Q08AF3 891 aa19.84■□□□□ 0.77
MED28-204ENST00000506409 DNAAF4Q8WXU2 420 aa19.84■□□□□ 0.77
MED28-204ENST00000506409 TOMM70O94826 608 aa19.83■□□□□ 0.77
MED28-204ENST00000506409 TMC4Q7Z404 712 aa19.83■□□□□ 0.77
MED28-204ENST00000506409 SP8Q8IXZ3 490 aa19.83■□□□□ 0.77
MED28-204ENST00000506409 C16orf71Q8IYS4 520 aaPredicted RBP19.83■□□□□ 0.77
MED28-204ENST00000506409 CDHR2Q9BYE9 1310 aa19.82■□□□□ 0.76
MED28-204ENST00000506409 TAF1P21675 1872 aa19.82■□□□□ 0.76
MED28-204ENST00000506409 PDE8AO60658 829 aa19.82■□□□□ 0.76
MED28-204ENST00000506409 CCDC152Q4G0S7 254 aa19.81■□□□□ 0.76
MED28-204ENST00000506409 LINS1Q8NG48 757 aa19.81■□□□□ 0.76
MED28-204ENST00000506409 JDP2Q8WYK2 163 aa19.81■□□□□ 0.76
MED28-204ENST00000506409 CELF1Q92879 486 aaKnown RBP19.81■□□□□ 0.76
MED28-204ENST00000506409 CDCA7LQ96GN5 454 aa19.81■□□□□ 0.76
MED28-204ENST00000506409 DDNO94850 711 aaPredicted RBP19.8■□□□□ 0.76
MED28-204ENST00000506409 VEGFAP15692 232 aaPredicted RBP19.8■□□□□ 0.76
MED28-204ENST00000506409 GCKRQ14397 625 aa19.8■□□□□ 0.76
MED28-204ENST00000506409 DPP8Q6V1X1 898 aaPredicted RBP19.8■□□□□ 0.76
MED28-204ENST00000506409 LARGE2Q8N3Y3 721 aa19.8■□□□□ 0.76
MED28-204ENST00000506409 MPNDQ8N594 471 aa19.8■□□□□ 0.76
MED28-204ENST00000506409 F6X3S4 739 aa19.79■□□□□ 0.76
MED28-204ENST00000506409 UBE3BQ7Z3V4 1068 aa19.79■□□□□ 0.76
MED28-204ENST00000506409 SUPT20HQ8NEM7 779 aa19.79■□□□□ 0.76
MED28-204ENST00000506409 CCDC85AQ96PX6 553 aaPredicted RBP19.79■□□□□ 0.76
MED28-204ENST00000506409 RTFDC1Q9BY42 306 aaPredicted RBP19.79■□□□□ 0.76
MED28-204ENST00000506409 WDR90Q96KV7 1748 aa19.79■□□□□ 0.76
MED28-204ENST00000506409 ZNF541Q9H0D2 1346 aa19.78■□□□□ 0.76
MED28-204ENST00000506409 H7C1W4 665 aa19.78■□□□□ 0.76
MED28-204ENST00000506409 FZD9O00144 591 aa19.78■□□□□ 0.76
MED28-204ENST00000506409 PPIP5K2O43314 1243 aa19.78■□□□□ 0.76
MED28-204ENST00000506409 CTSWP56202 376 aa19.78■□□□□ 0.76
MED28-204ENST00000506409 RPS8P62241 208 aaKnown RBP19.78■□□□□ 0.76
MED28-204ENST00000506409 RBM46Q8TBY0 533 aaKnown RBP19.78■□□□□ 0.76
MED28-204ENST00000506409 SEC31BQ9NQW1 1179 aa19.78■□□□□ 0.76
MED28-204ENST00000506409 COL4A1P02462 1669 aa19.78■□□□□ 0.76
MED28-204ENST00000506409 LRRC37AA6NMS7 1700 aa19.77■□□□□ 0.76
MED28-204ENST00000506409 COL4A5P29400 1685 aa19.77■□□□□ 0.76
MED28-204ENST00000506409 POTECB2RU33 542 aa19.76■□□□□ 0.75
MED28-204ENST00000506409 AOC3Q16853 763 aa19.76■□□□□ 0.75
MED28-204ENST00000506409 BEND3Q5T5X7 828 aa19.76■□□□□ 0.75
MED28-204ENST00000506409 NIM1KQ8IY84 436 aa19.76■□□□□ 0.75
MED28-204ENST00000506409 TRMT2AQ8IZ69 625 aaKnown RBP19.76■□□□□ 0.75
MED28-204ENST00000506409 VPS33BQ9H267 617 aa19.76■□□□□ 0.75
MED28-204ENST00000506409 NSFL1CQ9UNZ2 370 aaKnown RBP19.76■□□□□ 0.75
MED28-204ENST00000506409 EIF6P56537 245 aaKnown RBP19.75■□□□□ 0.75
MED28-204ENST00000506409 MRPL50Q8N5N7 158 aaKnown RBP19.75■□□□□ 0.75
MED28-204ENST00000506409 TTLL11Q8NHH1 800 aa19.75■□□□□ 0.75
MED28-204ENST00000506409 L3MBTL3Q96JM7 780 aaPredicted RBP19.75■□□□□ 0.75
MED28-204ENST00000506409 SLC4A10Q6U841 1118 aa19.74■□□□□ 0.75
MED28-204ENST00000506409 SSH1Q8WYL5 1049 aa19.74■□□□□ 0.75
MED28-204ENST00000506409 MYH3P11055 1940 aa19.74■□□□□ 0.75
MED28-204ENST00000506409 IQCA1LA6NCM1 817 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 HSPA6P17066 643 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 CASP7P55210 303 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 KIAA2012Q0VF49 1180 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 ANKRD18AQ8IVF6 992 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 GPC2Q8N158 579 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 CDC5LQ99459 802 aaKnown RBP19.73■□□□□ 0.75
MED28-204ENST00000506409 PLA2G12BQ9BX93 195 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 BCL2L13Q9BXK5 485 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 GREM2Q9H772 168 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 DUOX1Q9NRD9 1551 aa19.73■□□□□ 0.75
MED28-204ENST00000506409 GPSM2P81274 684 aa19.72■□□□□ 0.75
MED28-204ENST00000506409 FSTL1Q12841 308 aa19.72■□□□□ 0.75
MED28-204ENST00000506409 SMC1BQ8NDV3 1235 aa19.72■□□□□ 0.75
MED28-204ENST00000506409 PTPRCP08575 1304 aa19.72■□□□□ 0.75
MED28-204ENST00000506409 RTL9Q8NET4 1388 aa19.71■□□□□ 0.75
MED28-204ENST00000506409 C6orf229H3BNL8 230 aa19.71■□□□□ 0.75
MED28-204ENST00000506409 CT47B1P0C2W7 299 aaPredicted RBP19.71■□□□□ 0.75
MED28-204ENST00000506409 ALDH1L2Q3SY69 923 aa19.71■□□□□ 0.75
MED28-204ENST00000506409 SRCIN1Q9C0H9 1055 aa19.71■□□□□ 0.75
MED28-204ENST00000506409 GJA3Q9Y6H8 435 aa19.71■□□□□ 0.75
MED28-204ENST00000506409 GRM8O00222 908 aa19.7■□□□□ 0.74
MED28-204ENST00000506409 ALDH1L1O75891 902 aa19.7■□□□□ 0.74
MED28-204ENST00000506409 WASHC4Q2M389 1173 aa19.7■□□□□ 0.74
MED28-204ENST00000506409 SMC4Q9NTJ3 1288 aa19.7■□□□□ 0.74
MED28-204ENST00000506409 ANKIB1Q9P2G1 1089 aa19.7■□□□□ 0.74
MED28-204ENST00000506409 POLLQ9UGP5 575 aa19.7■□□□□ 0.74
MED28-204ENST00000506409 ZNRF3Q9ULT6 936 aa19.7■□□□□ 0.74
MED28-204ENST00000506409 SCN4AP35499 1836 aa19.69■□□□□ 0.74
MED28-204ENST00000506409 LTBP1Q14766 1721 aa19.69■□□□□ 0.74
MED28-204ENST00000506409 HNRNPUQ00839 825 aaKnown RBP eCLIP19.69■□□□□ 0.74
MED28-204ENST00000506409 TBC1D16Q8TBP0 767 aa19.69■□□□□ 0.74
MED28-204ENST00000506409 TAF1DQ9H5J8 278 aaPredicted RBP19.69■□□□□ 0.74
MED28-204ENST00000506409 PODXL2Q9NZ53 605 aa19.69■□□□□ 0.74
MED28-204ENST00000506409 C9orf78Q9NZ63 289 aaPredicted RBP19.69■□□□□ 0.74
MED28-204ENST00000506409 HACL1Q9UJ83 578 aa19.69■□□□□ 0.74
MED28-204ENST00000506409 CSF1RP07333 972 aa19.68■□□□□ 0.74
MED28-204ENST00000506409 ITGA6P23229 1130 aa19.68■□□□□ 0.74
MED28-204ENST00000506409 FAM161AQ3B820 660 aa19.68■□□□□ 0.74
MED28-204ENST00000506409 EYA3Q99504 573 aa19.68■□□□□ 0.74
MED28-204ENST00000506409 RIMBP2O15034 1052 aa19.67■□□□□ 0.74
MED28-204ENST00000506409 UFL1O94874 794 aa19.67■□□□□ 0.74
MED28-204ENST00000506409 CXCL9Q07325 125 aa19.67■□□□□ 0.74
MED28-204ENST00000506409 BSDC1Q9NW68 430 aaPredicted RBP19.67■□□□□ 0.74
MED28-204ENST00000506409 GGA1Q9UJY5 639 aa19.67■□□□□ 0.74
MED28-204ENST00000506409 XDHP47989 1333 aa19.67■□□□□ 0.74
MED28-204ENST00000506409 LMOD1P29536 600 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms