RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 FGD6Q6ZV73 1430 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 FBXO33Q7Z6M2 555 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 RPGRQ92834 1020 aaKnown RBP10.54□□□□□ -0.72
HTT-203ENST00000506137 SLC39A13Q96H72 371 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 NGLY1Q96IV0 654 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 RNPC3Q96LT9 517 aaKnown RBP10.54□□□□□ -0.72
HTT-203ENST00000506137 RMDN2Q96LZ7 410 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 MAP3K14Q99558 947 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 AS3MTQ9HBK9 375 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 CLIC5Q9NZA1 410 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 AFF2P51816 1311 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 WASHC2AQ641Q2 1341 aa10.54□□□□□ -0.72
HTT-203ENST00000506137 POM121CA8CG34 1229 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 TMEM110-MUSTN1A8MSY1 372 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 TCEA3O75764 348 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 MYL1P05976 194 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 XRCC5P13010 732 aaKnown RBP10.53□□□□□ -0.72
HTT-203ENST00000506137 MAGEA8P43361 318 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 E2F5Q15329 346 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 SEPT7Q16181 437 aaKnown RBP10.53□□□□□ -0.72
HTT-203ENST00000506137 ZNF394Q53GI3 561 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 HDGFL2Q7Z4V5 671 aaPredicted RBP10.53□□□□□ -0.72
HTT-203ENST00000506137 MYO1HQ8N1T3 1032 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 PAWRQ96IZ0 340 aaKnown RBP10.53□□□□□ -0.72
HTT-203ENST00000506137 PPP1R12CQ9BZL4 782 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 SLKQ9H2G2 1235 aaPredicted RBP10.53□□□□□ -0.72
HTT-203ENST00000506137 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 SLAIN2Q9P270 581 aa10.53□□□□□ -0.72
HTT-203ENST00000506137 DNMT1P26358 1616 aaKnown RBP10.53□□□□□ -0.72
HTT-203ENST00000506137 DYTNA2CJ06 578 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 IQCA1LA6NCM1 817 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 ORC4O43929 436 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 MYL3P08590 195 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 MSL3P1P0C860 447 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 ZNF76P36508 570 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 RAD51AP2Q09MP3 1159 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 LONRF1Q17RB8 773 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 SWT1Q5T5J6 900 aaKnown RBP10.52□□□□□ -0.73
HTT-203ENST00000506137 PDXDC1Q6P996 788 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 TEKT1Q969V4 418 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 MRFAP1L1Q96HT8 127 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 TEX13AQ9BXU3 409 aaPredicted RBP10.52□□□□□ -0.73
HTT-203ENST00000506137 BACH2Q9BYV9 841 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 TGIF2Q9GZN2 237 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 COMMD8Q9NX08 183 aa10.52□□□□□ -0.73
HTT-203ENST00000506137 SUPT16HQ9Y5B9 1047 aaKnown RBP10.52□□□□□ -0.73
HTT-203ENST00000506137 MRPL42Q9Y6G3 142 aaKnown RBP10.52□□□□□ -0.73
HTT-203ENST00000506137 SHPRHQ149N8 1683 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 SH3BGRP55822 239 aaPredicted RBP10.51□□□□□ -0.73
HTT-203ENST00000506137 PPP4R4Q6NUP7 873 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 TNS4Q8IZW8 715 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 JMYQ8N9B5 988 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 OXER1Q8TDS5 423 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 GIMAP1Q8WWP7 306 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 NCAPGQ9BPX3 1015 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 DHX36Q9H2U1 1008 aaKnown RBP10.51□□□□□ -0.73
HTT-203ENST00000506137 CCSER2Q9H7U1 834 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 SNRKQ9NRH2 765 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 DONSONQ9NYP3 566 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 REREQ9P2R6 1566 aa10.51□□□□□ -0.73
HTT-203ENST00000506137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.51□□□□□ -0.73
HTT-203ENST00000506137 LRRC9Q6ZRR7 1453 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
HTT-203ENST00000506137 FAM25EA8MYX2 175 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 LZTS3O60299 673 aaPredicted RBP10.5□□□□□ -0.73
HTT-203ENST00000506137 DIAPH1O60610 1272 aaKnown RBP10.5□□□□□ -0.73
HTT-203ENST00000506137 AMOTQ4VCS5 1084 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 CPLX2Q6PUV4 134 aaKnown RBP10.5□□□□□ -0.73
HTT-203ENST00000506137 FERMT3Q86UX7 667 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 CENPTQ96BT3 561 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 LZTS2Q9BRK4 669 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 PDGFDQ9GZP0 370 aaPredicted RBP10.5□□□□□ -0.73
HTT-203ENST00000506137 LGR6Q9HBX8 967 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 CAPN10Q9HC96 672 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 SMC4Q9NTJ3 1288 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 STK26Q9P289 416 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 PGAP2Q9UHJ9 254 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 XPO7Q9UIA9 1087 aaKnown RBP10.5□□□□□ -0.73
HTT-203ENST00000506137 SLC45A1Q9Y2W3 748 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 EID1Q9Y6B2 187 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 COL16A1Q07092 1604 aaPredicted RBP10.5□□□□□ -0.73
HTT-203ENST00000506137 UTRNP46939 3433 aa10.5□□□□□ -0.73
HTT-203ENST00000506137 BLMP54132 1417 aaPredicted RBP10.5□□□□□ -0.73
HTT-203ENST00000506137 A2ML1A8K2U0 1454 aa10.49□□□□□ -0.73
HTT-203ENST00000506137 GTPBP10A4D1E9 387 aaKnown RBP10.49□□□□□ -0.73
HTT-203ENST00000506137 ITGAEP38570 1179 aa10.49□□□□□ -0.73
HTT-203ENST00000506137 TRDNQ13061 729 aa10.49□□□□□ -0.73
HTT-203ENST00000506137 SIM2Q14190 667 aaPredicted RBP10.49□□□□□ -0.73
HTT-203ENST00000506137 RASA3Q14644 834 aa10.49□□□□□ -0.73
HTT-203ENST00000506137 TMEM259Q4ZIN3 620 aa10.49□□□□□ -0.73
HTT-203ENST00000506137 ALFQ53S48 1182 aa10.49□□□□□ -0.73
HTT-203ENST00000506137 C11orf74Q86VG3 221 aa10.49□□□□□ -0.73
HTT-203ENST00000506137 SAMD14Q8IZD0 417 aaPredicted RBP10.49□□□□□ -0.73
HTT-203ENST00000506137 KLHL23Q8NBE8 558 aa10.49□□□□□ -0.73
HTT-203ENST00000506137 ZBTB10Q96DT7 871 aa10.49□□□□□ -0.73
HTT-203ENST00000506137 CPSF2Q9P2I0 782 aaKnown RBP10.49□□□□□ -0.73
HTT-203ENST00000506137 MKRN1Q9UHC7 482 aaKnown RBP10.49□□□□□ -0.73
HTT-203ENST00000506137 RRM1P23921 792 aa10.48□□□□□ -0.73
HTT-203ENST00000506137 TSPAN7P41732 249 aa10.48□□□□□ -0.73
HTT-203ENST00000506137 ABL2P42684 1182 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms