RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 GRAPQ13588 217 aa14.81□□□□□ -0.04
SIL1-208ENST00000505945 USP50Q70EL3 339 aaPredicted RBP14.81□□□□□ -0.04
SIL1-208ENST00000505945 GRAPLQ8TC17 118 aaPredicted RBP14.81□□□□□ -0.04
SIL1-208ENST00000505945 CFAP44Q96MT7 982 aa14.81□□□□□ -0.04
SIL1-208ENST00000505945 GPRC5DQ9NZD1 345 aa14.81□□□□□ -0.04
SIL1-208ENST00000505945 DBF4Q9UBU7 674 aaPredicted RBP14.81□□□□□ -0.04
SIL1-208ENST00000505945 TAF1P21675 1872 aa14.8□□□□□ -0.04
SIL1-208ENST00000505945 TRAF5O00463 557 aa14.8□□□□□ -0.04
SIL1-208ENST00000505945 HOXB7P09629 217 aa14.8□□□□□ -0.04
SIL1-208ENST00000505945 KIAA2012Q0VF49 1180 aa14.8□□□□□ -0.04
SIL1-208ENST00000505945 DUSP27Q5VZP5 1158 aa14.8□□□□□ -0.04
SIL1-208ENST00000505945 AIDAQ96BJ3 306 aa14.8□□□□□ -0.04
SIL1-208ENST00000505945 FAM89AQ96GI7 184 aa14.8□□□□□ -0.04
SIL1-208ENST00000505945 ISCA1Q9BUE6 129 aa14.8□□□□□ -0.04
SIL1-208ENST00000505945 RAD17O75943 681 aa14.79□□□□□ -0.04
SIL1-208ENST00000505945 GMPSP49915 693 aaPredicted RBP14.79□□□□□ -0.04
SIL1-208ENST00000505945 RTL5Q5HYW3 569 aaPredicted RBP14.79□□□□□ -0.04
SIL1-208ENST00000505945 ADARB2Q9NS39 739 aaKnown RBP14.79□□□□□ -0.04
SIL1-208ENST00000505945 MBIPQ9NS73 344 aa14.79□□□□□ -0.04
SIL1-208ENST00000505945 HYPKQ9NX55 129 aa14.79□□□□□ -0.04
SIL1-208ENST00000505945 WBP1LQ9NX94 342 aa14.79□□□□□ -0.04
SIL1-208ENST00000505945 WDR33Q9C0J8 1336 aaKnown RBP14.78□□□□□ -0.04
SIL1-208ENST00000505945 CST9Q5W186 159 aa14.78□□□□□ -0.04
SIL1-208ENST00000505945 CIAPIN1Q6FI81 312 aa14.78□□□□□ -0.04
SIL1-208ENST00000505945 PRKRIP1Q9H875 184 aaPredicted RBP14.78□□□□□ -0.04
SIL1-208ENST00000505945 ELL2O00472 640 aaPredicted RBP14.77□□□□□ -0.05
SIL1-208ENST00000505945 APAF1O14727 1248 aa14.77□□□□□ -0.05
SIL1-208ENST00000505945 ZNF853P0CG23 659 aa14.77□□□□□ -0.05
SIL1-208ENST00000505945 CTCFP49711 727 aaPredicted RBP14.77□□□□□ -0.05
SIL1-208ENST00000505945 TNIP1Q15025 636 aa14.77□□□□□ -0.05
SIL1-208ENST00000505945 SF3B3Q15393 1217 aaKnown RBP14.77□□□□□ -0.05
SIL1-208ENST00000505945 TMC4Q7Z404 712 aa14.77□□□□□ -0.05
SIL1-208ENST00000505945 CELF1Q92879 486 aaKnown RBP14.77□□□□□ -0.05
SIL1-208ENST00000505945 BCL2L13Q9BXK5 485 aa14.77□□□□□ -0.05
SIL1-208ENST00000505945 PRDM10Q9NQV6 1147 aa14.77□□□□□ -0.05
SIL1-208ENST00000505945 YDJCA8MPS7 323 aa14.76□□□□□ -0.05
SIL1-208ENST00000505945 LBX1P52954 281 aa14.76□□□□□ -0.05
SIL1-208ENST00000505945 PAXIP1Q6ZW49 1069 aaPredicted RBP14.76□□□□□ -0.05
SIL1-208ENST00000505945 RIC3Q7Z5B4 369 aa14.76□□□□□ -0.05
SIL1-208ENST00000505945 NSFL1CQ9UNZ2 370 aaKnown RBP14.76□□□□□ -0.05
SIL1-208ENST00000505945 DDX60Q8IY21 1712 aaKnown RBP14.75□□□□□ -0.05
SIL1-208ENST00000505945 SHTN1A0MZ66 631 aa14.75□□□□□ -0.05
SIL1-208ENST00000505945 IRS4O14654 1257 aaPredicted RBP14.75□□□□□ -0.05
SIL1-208ENST00000505945 HIRAP54198 1017 aaPredicted RBP14.75□□□□□ -0.05
SIL1-208ENST00000505945 GRM1Q13255 1194 aa14.75□□□□□ -0.05
SIL1-208ENST00000505945 TRIM28Q13263 835 aaKnown RBP14.75□□□□□ -0.05
SIL1-208ENST00000505945 WASHC4Q2M389 1173 aa14.75□□□□□ -0.05
SIL1-208ENST00000505945 CAPNS2Q96L46 248 aa14.75□□□□□ -0.05
SIL1-208ENST00000505945 PHAXQ9H814 394 aaKnown RBP14.75□□□□□ -0.05
SIL1-208ENST00000505945 CNOT7Q9UIV1 285 aaKnown RBP14.75□□□□□ -0.05
SIL1-208ENST00000505945 DUOX1Q9NRD9 1551 aa14.74□□□□□ -0.05
SIL1-208ENST00000505945 C6orf229H3BNL8 230 aa14.74□□□□□ -0.05
SIL1-208ENST00000505945 RIMBP2O15034 1052 aa14.74□□□□□ -0.05
SIL1-208ENST00000505945 GPSM2P81274 684 aa14.74□□□□□ -0.05
SIL1-208ENST00000505945 MAP2K1Q02750 393 aaPredicted RBP14.74□□□□□ -0.05
SIL1-208ENST00000505945 CYP4F22Q6NT55 531 aa14.74□□□□□ -0.05
SIL1-208ENST00000505945 GLIS2Q9BZE0 524 aaPredicted RBP14.74□□□□□ -0.05
SIL1-208ENST00000505945 IFT57Q9NWB7 429 aa14.74□□□□□ -0.05
SIL1-208ENST00000505945 PGAP2Q9UHJ9 254 aa14.74□□□□□ -0.05
SIL1-208ENST00000505945 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
SIL1-208ENST00000505945 ECE1P42892 770 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 RPS8P62241 208 aaKnown RBP14.73□□□□□ -0.05
SIL1-208ENST00000505945 GNAI1P63096 354 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 GOLGA2Q08379 1002 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 C8orf58Q8NAV2 365 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 TRPM4Q8TD43 1214 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 GPR101Q96P66 508 aaPredicted RBP14.73□□□□□ -0.05
SIL1-208ENST00000505945 DBNDD1Q9H9R9 158 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 POLLQ9UGP5 575 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 TLL2Q9Y6L7 1015 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 COL4A1P02462 1669 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 TRPM7Q96QT4 1865 aa14.73□□□□□ -0.05
SIL1-208ENST00000505945 CDHR2Q9BYE9 1310 aa14.72□□□□□ -0.05
SIL1-208ENST00000505945 H7C1D1 291 aa14.72□□□□□ -0.05
SIL1-208ENST00000505945 CELF2O95319 508 aaKnown RBP14.72□□□□□ -0.05
SIL1-208ENST00000505945 HSPA8P11142 646 aaKnown RBP14.72□□□□□ -0.05
SIL1-208ENST00000505945 CALD1Q05682 793 aaKnown RBP14.72□□□□□ -0.05
SIL1-208ENST00000505945 MICALL2Q8IY33 904 aa14.72□□□□□ -0.05
SIL1-208ENST00000505945 ZBTB38Q8NAP3 1195 aaPredicted RBP14.72□□□□□ -0.05
SIL1-208ENST00000505945 ZC3H15Q8WU90 426 aaKnown RBP14.72□□□□□ -0.05
SIL1-208ENST00000505945 JARID2Q92833 1246 aaPredicted RBP14.72□□□□□ -0.05
SIL1-208ENST00000505945 MYD88Q99836 296 aa14.72□□□□□ -0.05
SIL1-208ENST00000505945 SEC31BQ9NQW1 1179 aa14.72□□□□□ -0.05
SIL1-208ENST00000505945 KCNQ5Q9NR82 932 aa14.72□□□□□ -0.05
SIL1-208ENST00000505945 LRRC37AA6NMS7 1700 aa14.72□□□□□ -0.05
SIL1-208ENST00000505945 PSMD14O00487 310 aa14.71□□□□□ -0.05
SIL1-208ENST00000505945 DOK7Q18PE1 504 aa14.71□□□□□ -0.05
SIL1-208ENST00000505945 SAPCD2Q86UD0 394 aa14.71□□□□□ -0.05
SIL1-208ENST00000505945 ZNF408Q9H9D4 720 aa14.71□□□□□ -0.05
SIL1-208ENST00000505945 CDC37L1Q7L3B6 337 aa14.7□□□□□ -0.06
SIL1-208ENST00000505945 SAMD7Q7Z3H4 446 aa14.7□□□□□ -0.06
SIL1-208ENST00000505945 TBC1D16Q8TBP0 767 aa14.7□□□□□ -0.06
SIL1-208ENST00000505945 DPF2Q92785 391 aa14.7□□□□□ -0.06
SIL1-208ENST00000505945 ECE2O60344 883 aa14.69□□□□□ -0.06
SIL1-208ENST00000505945 AOC2O75106 756 aa14.69□□□□□ -0.06
SIL1-208ENST00000505945 TBC1D10BQ4KMP7 808 aaPredicted RBP14.69□□□□□ -0.06
SIL1-208ENST00000505945 DLK2Q6UY11 383 aa14.69□□□□□ -0.06
SIL1-208ENST00000505945 USP48Q86UV5 1035 aa14.69□□□□□ -0.06
SIL1-208ENST00000505945 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
SIL1-208ENST00000505945 CCDC191Q8NCU4 936 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms