RNA–Protein interactions for RNA: ENST00000505883.1

MBD4-205, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-205ENST00000505883 BEND3Q5T5X7 828 aa20.91■□□□□ 0.94
MBD4-205ENST00000505883 CC2D2BQ6DHV5 1058 aa20.91■□□□□ 0.94
MBD4-205ENST00000505883 DDX60Q8IY21 1712 aaKnown RBP20.91■□□□□ 0.94
MBD4-205ENST00000505883 CDHR2Q9BYE9 1310 aa20.91■□□□□ 0.94
MBD4-205ENST00000505883 GPBP1L1Q9HC44 474 aaPredicted RBP20.91■□□□□ 0.94
MBD4-205ENST00000505883 ATP6V0A2Q9Y487 856 aa20.91■□□□□ 0.94
MBD4-205ENST00000505883 SNED1Q8TER0 1413 aa20.9■□□□□ 0.94
MBD4-205ENST00000505883 CT47B1P0C2W7 299 aaPredicted RBP20.9■□□□□ 0.94
MBD4-205ENST00000505883 ALDH1L2Q3SY69 923 aa20.9■□□□□ 0.94
MBD4-205ENST00000505883 UBE3BQ7Z3V4 1068 aa20.9■□□□□ 0.94
MBD4-205ENST00000505883 LAMB2P55268 1798 aa20.9■□□□□ 0.94
MBD4-205ENST00000505883 CELF1Q92879 486 aaKnown RBP20.89■□□□□ 0.93
MBD4-205ENST00000505883 ZNF277Q9NRM2 450 aaPredicted RBP20.89■□□□□ 0.93
MBD4-205ENST00000505883 FER1L6Q2WGJ9 1857 aa20.89■□□□□ 0.93
MBD4-205ENST00000505883 SLC4A10Q6U841 1118 aa20.88■□□□□ 0.93
MBD4-205ENST00000505883 SP8Q8IXZ3 490 aa20.88■□□□□ 0.93
MBD4-205ENST00000505883 CCDC85AQ96PX6 553 aaPredicted RBP20.88■□□□□ 0.93
MBD4-205ENST00000505883 PSMD1Q99460 953 aa20.88■□□□□ 0.93
MBD4-205ENST00000505883 TMX4Q9H1E5 349 aaPredicted RBP20.88■□□□□ 0.93
MBD4-205ENST00000505883 SMC4Q9NTJ3 1288 aa20.88■□□□□ 0.93
MBD4-205ENST00000505883 CACNA1FO60840 1977 aa20.88■□□□□ 0.93
MBD4-205ENST00000505883 SBF1O95248 1867 aa20.88■□□□□ 0.93
MBD4-205ENST00000505883 ZC3H4Q9UPT8 1303 aaKnown RBP20.87■□□□□ 0.93
MBD4-205ENST00000505883 CASP7P55210 303 aa20.87■□□□□ 0.93
MBD4-205ENST00000505883 CCDC152Q4G0S7 254 aa20.87■□□□□ 0.93
MBD4-205ENST00000505883 GRIPAP1Q4V328 841 aa20.87■□□□□ 0.93
MBD4-205ENST00000505883 SEC31BQ9NQW1 1179 aa20.87■□□□□ 0.93
MBD4-205ENST00000505883 FOXD4L1Q9NU39 408 aa20.87■□□□□ 0.93
MBD4-205ENST00000505883 PTPRCP08575 1304 aa20.86■□□□□ 0.93
MBD4-205ENST00000505883 CTSWP56202 376 aa20.86■□□□□ 0.93
MBD4-205ENST00000505883 TTLL11Q8NHH1 800 aa20.85■□□□□ 0.93
MBD4-205ENST00000505883 IARSP41252 1262 aaKnown RBP20.84■□□□□ 0.93
MBD4-205ENST00000505883 RARSP54136 660 aaKnown RBP20.84■□□□□ 0.93
MBD4-205ENST00000505883 RPS8P62241 208 aaKnown RBP20.84■□□□□ 0.93
MBD4-205ENST00000505883 TMC4Q7Z404 712 aa20.84■□□□□ 0.93
MBD4-205ENST00000505883 SRCIN1Q9C0H9 1055 aa20.84■□□□□ 0.93
MBD4-205ENST00000505883 COL4A1P02462 1669 aa20.83■□□□□ 0.93
MBD4-205ENST00000505883 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
MBD4-205ENST00000505883 ALDH1L1O75891 902 aa20.83■□□□□ 0.93
MBD4-205ENST00000505883 DPP8Q6V1X1 898 aaPredicted RBP20.83■□□□□ 0.93
MBD4-205ENST00000505883 MPNDQ8N594 471 aa20.83■□□□□ 0.93
MBD4-205ENST00000505883 PLA2G12BQ9BX93 195 aa20.83■□□□□ 0.93
MBD4-205ENST00000505883 NMRK2Q9NPI5 230 aa20.83■□□□□ 0.93
MBD4-205ENST00000505883 KDM2BQ8NHM5 1336 aa20.82■□□□□ 0.92
MBD4-205ENST00000505883 GLTPD2A6NH11 291 aa20.82■□□□□ 0.92
MBD4-205ENST00000505883 GRM8O00222 908 aa20.82■□□□□ 0.92
MBD4-205ENST00000505883 GREM2Q9H772 168 aa20.82■□□□□ 0.92
MBD4-205ENST00000505883 NOB1Q9ULX3 412 aaKnown RBP20.82■□□□□ 0.92
MBD4-205ENST00000505883 RTFDC1Q9BY42 306 aaPredicted RBP20.81■□□□□ 0.92
MBD4-205ENST00000505883 C9orf78Q9NZ63 289 aaPredicted RBP20.81■□□□□ 0.92
MBD4-205ENST00000505883 TAF1P21675 1872 aa20.81■□□□□ 0.92
MBD4-205ENST00000505883 KIF3CO14782 793 aa20.8■□□□□ 0.92
MBD4-205ENST00000505883 BRPF1P55201 1214 aaPredicted RBP20.8■□□□□ 0.92
MBD4-205ENST00000505883 DPY19L2Q6NUT2 758 aa20.8■□□□□ 0.92
MBD4-205ENST00000505883 TIAM2Q8IVF5 1701 aa20.79■□□□□ 0.92
MBD4-205ENST00000505883 CSF1RP07333 972 aa20.79■□□□□ 0.92
MBD4-205ENST00000505883 ANKRD18AQ8IVF6 992 aa20.79■□□□□ 0.92
MBD4-205ENST00000505883 LARGE2Q8N3Y3 721 aa20.79■□□□□ 0.92
MBD4-205ENST00000505883 SUPT20HQ8NEM7 779 aa20.79■□□□□ 0.92
MBD4-205ENST00000505883 RRAGCQ9HB90 399 aa20.79■□□□□ 0.92
MBD4-205ENST00000505883 NSFL1CQ9UNZ2 370 aaKnown RBP20.79■□□□□ 0.92
MBD4-205ENST00000505883 RTL9Q8NET4 1388 aa20.79■□□□□ 0.92
MBD4-205ENST00000505883 CCDC88AQ3V6T2 1871 aa20.79■□□□□ 0.92
MBD4-205ENST00000505883 PPIP5K2O43314 1243 aa20.78■□□□□ 0.92
MBD4-205ENST00000505883 GPSM2P81274 684 aa20.78■□□□□ 0.92
MBD4-205ENST00000505883 FOXO4P98177 505 aa20.78■□□□□ 0.92
MBD4-205ENST00000505883 AOC3Q16853 763 aa20.78■□□□□ 0.92
MBD4-205ENST00000505883 JDP2Q8WYK2 163 aa20.78■□□□□ 0.92
MBD4-205ENST00000505883 CDC5LQ99459 802 aaKnown RBP20.78■□□□□ 0.92
MBD4-205ENST00000505883 FZD9O00144 591 aa20.77■□□□□ 0.92
MBD4-205ENST00000505883 DDNO94850 711 aaPredicted RBP20.77■□□□□ 0.92
MBD4-205ENST00000505883 FAM161AQ3B820 660 aa20.77■□□□□ 0.92
MBD4-205ENST00000505883 EPHA10Q5JZY3 1008 aa20.77■□□□□ 0.92
MBD4-205ENST00000505883 VPS33BQ9H267 617 aa20.77■□□□□ 0.92
MBD4-205ENST00000505883 COL4A5P29400 1685 aa20.77■□□□□ 0.91
MBD4-205ENST00000505883 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
MBD4-205ENST00000505883 ITGA6P23229 1130 aa20.76■□□□□ 0.91
MBD4-205ENST00000505883 ZNF541Q9H0D2 1346 aa20.76■□□□□ 0.91
MBD4-205ENST00000505883 DICER1Q9UPY3 1922 aaKnown RBP20.75■□□□□ 0.91
MBD4-205ENST00000505883 BCAR3O75815 825 aa20.75■□□□□ 0.91
MBD4-205ENST00000505883 C1QTNF8P60827 252 aa20.75■□□□□ 0.91
MBD4-205ENST00000505883 SUCLG2Q96I99 432 aa20.75■□□□□ 0.91
MBD4-205ENST00000505883 API5Q9BZZ5 524 aaKnown RBP20.75■□□□□ 0.91
MBD4-205ENST00000505883 POLLQ9UGP5 575 aa20.75■□□□□ 0.91
MBD4-205ENST00000505883 UTYO14607 1347 aa20.75■□□□□ 0.91
MBD4-205ENST00000505883 KIF16BQ96L93 1317 aa20.75■□□□□ 0.91
MBD4-205ENST00000505883 LRRC37AA6NMS7 1700 aa20.74■□□□□ 0.91
MBD4-205ENST00000505883 C6orf229H3BNL8 230 aa20.74■□□□□ 0.91
MBD4-205ENST00000505883 KIAA2012Q0VF49 1180 aa20.74■□□□□ 0.91
MBD4-205ENST00000505883 LMBR1LQ6UX01 489 aa20.74■□□□□ 0.91
MBD4-205ENST00000505883 NIM1KQ8IY84 436 aa20.74■□□□□ 0.91
MBD4-205ENST00000505883 BSDC1Q9NW68 430 aaPredicted RBP20.74■□□□□ 0.91
MBD4-205ENST00000505883 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
MBD4-205ENST00000505883 ANKIB1Q9P2G1 1089 aa20.74■□□□□ 0.91
MBD4-205ENST00000505883 DUOX1Q9NRD9 1551 aa20.73■□□□□ 0.91
MBD4-205ENST00000505883 POTECB2RU33 542 aa20.73■□□□□ 0.91
MBD4-205ENST00000505883 TBC1D16Q8TBP0 767 aa20.73■□□□□ 0.91
MBD4-205ENST00000505883 KAZALD1Q96I82 304 aa20.73■□□□□ 0.91
MBD4-205ENST00000505883 USP44Q9H0E7 712 aa20.73■□□□□ 0.91
MBD4-205ENST00000505883 CHMP3Q9Y3E7 222 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms