RNA–Protein interactions for RNA: ENST00000505753.1

SIM1-203, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 2

Gene SIM1, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-203ENST00000505753 RTL9Q8NET4 1388 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 UTYO14607 1347 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
SIM1-203ENST00000505753 ALDH1L1O75891 902 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 LMNB1P20700 586 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 GRAPQ13588 217 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 CCDC93Q567U6 631 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 RTKN2Q8IZC4 609 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 ZNF784Q8NCA9 323 aaPredicted RBP11.97□□□□□ -0.49
SIM1-203ENST00000505753 GRAPLQ8TC17 118 aaPredicted RBP11.97□□□□□ -0.49
SIM1-203ENST00000505753 ARHGAP45Q92619 1136 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 PSMD1Q99460 953 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
SIM1-203ENST00000505753 ATP6V0A2Q9Y487 856 aa11.97□□□□□ -0.49
SIM1-203ENST00000505753 DDX60Q8IY21 1712 aaKnown RBP11.97□□□□□ -0.49
SIM1-203ENST00000505753 CSF1RP07333 972 aa11.96□□□□□ -0.49
SIM1-203ENST00000505753 TMC4Q7Z404 712 aa11.96□□□□□ -0.49
SIM1-203ENST00000505753 SP8Q8IXZ3 490 aa11.96□□□□□ -0.49
SIM1-203ENST00000505753 TTLL11Q8NHH1 800 aa11.96□□□□□ -0.49
SIM1-203ENST00000505753 RTFDC1Q9BY42 306 aaPredicted RBP11.96□□□□□ -0.49
SIM1-203ENST00000505753 FKBP4Q02790 459 aaKnown RBP eCLIP11.95□□□□□ -0.5
SIM1-203ENST00000505753 RTL5Q5HYW3 569 aaPredicted RBP11.95□□□□□ -0.5
SIM1-203ENST00000505753 C9orf131Q5VYM1 1079 aa11.95□□□□□ -0.5
SIM1-203ENST00000505753 OLFM4Q6UX06 510 aa11.95□□□□□ -0.5
SIM1-203ENST00000505753 DDX46Q7L014 1031 aaKnown RBP11.95□□□□□ -0.5
SIM1-203ENST00000505753 UBE3BQ7Z3V4 1068 aa11.95□□□□□ -0.5
SIM1-203ENST00000505753 TAOK3Q9H2K8 898 aa11.95□□□□□ -0.5
SIM1-203ENST00000505753 SMC4Q9NTJ3 1288 aa11.95□□□□□ -0.5
SIM1-203ENST00000505753 FER1L6Q2WGJ9 1857 aa11.95□□□□□ -0.5
SIM1-203ENST00000505753 LAMB2P55268 1798 aa11.95□□□□□ -0.5
SIM1-203ENST00000505753 GRM8O00222 908 aa11.94□□□□□ -0.5
SIM1-203ENST00000505753 PPEF1O14829 653 aaPredicted RBP11.94□□□□□ -0.5
SIM1-203ENST00000505753 CTSWP56202 376 aa11.94□□□□□ -0.5
SIM1-203ENST00000505753 RASSF7Q02833 373 aa11.94□□□□□ -0.5
SIM1-203ENST00000505753 CELF1Q92879 486 aaKnown RBP11.94□□□□□ -0.5
SIM1-203ENST00000505753 BCL2L13Q9BXK5 485 aa11.94□□□□□ -0.5
SIM1-203ENST00000505753 SRCIN1Q9C0H9 1055 aa11.94□□□□□ -0.5
SIM1-203ENST00000505753 VPS33BQ9H267 617 aa11.94□□□□□ -0.5
SIM1-203ENST00000505753 RPS8P62241 208 aaKnown RBP11.93□□□□□ -0.5
SIM1-203ENST00000505753 FOXO4P98177 505 aa11.93□□□□□ -0.5
SIM1-203ENST00000505753 CCDC152Q4G0S7 254 aa11.93□□□□□ -0.5
SIM1-203ENST00000505753 SLC51AQ86UW1 340 aa11.93□□□□□ -0.5
SIM1-203ENST00000505753 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
SIM1-203ENST00000505753 NOB1Q9ULX3 412 aaKnown RBP11.93□□□□□ -0.5
SIM1-203ENST00000505753 COL4A1P02462 1669 aa11.93□□□□□ -0.5
SIM1-203ENST00000505753 KIF16BQ96L93 1317 aa11.92□□□□□ -0.5
SIM1-203ENST00000505753 SBF1O95248 1867 aa11.92□□□□□ -0.5
SIM1-203ENST00000505753 C1QTNF8P60827 252 aa11.92□□□□□ -0.5
SIM1-203ENST00000505753 KAZALD1Q96I82 304 aa11.92□□□□□ -0.5
SIM1-203ENST00000505753 API5Q9BZZ5 524 aaKnown RBP11.92□□□□□ -0.5
SIM1-203ENST00000505753 USP44Q9H0E7 712 aa11.92□□□□□ -0.5
SIM1-203ENST00000505753 SEC31BQ9NQW1 1179 aa11.92□□□□□ -0.5
SIM1-203ENST00000505753 RNF181Q9P0P0 153 aa11.92□□□□□ -0.5
SIM1-203ENST00000505753 NBPF7P0C2Y1 421 aaPredicted RBP11.91□□□□□ -0.5
SIM1-203ENST00000505753 RABL6Q3YEC7 729 aaPredicted RBP11.91□□□□□ -0.5
SIM1-203ENST00000505753 GREM2Q9H772 168 aa11.91□□□□□ -0.5
SIM1-203ENST00000505753 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
SIM1-203ENST00000505753 LRRC37AA6NMS7 1700 aa11.91□□□□□ -0.5
SIM1-203ENST00000505753 BCAR3O75815 825 aa11.9□□□□□ -0.5
SIM1-203ENST00000505753 CCT4P50991 539 aaKnown RBP11.9□□□□□ -0.5
SIM1-203ENST00000505753 EPHA10Q5JZY3 1008 aa11.9□□□□□ -0.5
SIM1-203ENST00000505753 INTS3Q68E01 1043 aaKnown RBP11.9□□□□□ -0.5
SIM1-203ENST00000505753 SLC4A10Q6U841 1118 aa11.9□□□□□ -0.5
SIM1-203ENST00000505753 BSDC1Q9NW68 430 aaPredicted RBP11.9□□□□□ -0.5
SIM1-203ENST00000505753 GLTPD2A6NH11 291 aa11.89□□□□□ -0.51
SIM1-203ENST00000505753 FZD9O00144 591 aa11.89□□□□□ -0.51
SIM1-203ENST00000505753 IPO8O15397 1037 aaKnown RBP11.89□□□□□ -0.51
SIM1-203ENST00000505753 TRIM27P14373 513 aa11.89□□□□□ -0.51
SIM1-203ENST00000505753 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
SIM1-203ENST00000505753 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
SIM1-203ENST00000505753 MPNDQ8N594 471 aa11.89□□□□□ -0.51
SIM1-203ENST00000505753 ZNF277Q9NRM2 450 aaPredicted RBP11.89□□□□□ -0.51
SIM1-203ENST00000505753 C9orf78Q9NZ63 289 aaPredicted RBP11.89□□□□□ -0.51
SIM1-203ENST00000505753 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
SIM1-203ENST00000505753 KIAA2012Q0VF49 1180 aa11.88□□□□□ -0.51
SIM1-203ENST00000505753 ATF7IPQ6VMQ6 1270 aa11.88□□□□□ -0.51
SIM1-203ENST00000505753 ANKRD18AQ8IVF6 992 aa11.88□□□□□ -0.51
SIM1-203ENST00000505753 SUPT20HQ8NEM7 779 aa11.88□□□□□ -0.51
SIM1-203ENST00000505753 CDC5LQ99459 802 aaKnown RBP11.88□□□□□ -0.51
SIM1-203ENST00000505753 LTBP1Q14766 1721 aa11.88□□□□□ -0.51
SIM1-203ENST00000505753 COL4A5P29400 1685 aa11.87□□□□□ -0.51
SIM1-203ENST00000505753 ITGA6P23229 1130 aa11.87□□□□□ -0.51
SIM1-203ENST00000505753 GPSM2P81274 684 aa11.87□□□□□ -0.51
SIM1-203ENST00000505753 FAM161AQ3B820 660 aa11.87□□□□□ -0.51
SIM1-203ENST00000505753 LMBR1LQ6UX01 489 aa11.87□□□□□ -0.51
SIM1-203ENST00000505753 DPP8Q6V1X1 898 aaPredicted RBP11.87□□□□□ -0.51
SIM1-203ENST00000505753 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
SIM1-203ENST00000505753 SUCLG2Q96I99 432 aa11.87□□□□□ -0.51
SIM1-203ENST00000505753 TMX4Q9H1E5 349 aaPredicted RBP11.87□□□□□ -0.51
SIM1-203ENST00000505753 POLLQ9UGP5 575 aa11.87□□□□□ -0.51
SIM1-203ENST00000505753 MINPP1Q9UNW1 487 aa11.87□□□□□ -0.51
SIM1-203ENST00000505753 POTECB2RU33 542 aa11.86□□□□□ -0.51
SIM1-203ENST00000505753 KIF3CO14782 793 aa11.86□□□□□ -0.51
SIM1-203ENST00000505753 TBC1D16Q8TBP0 767 aa11.86□□□□□ -0.51
SIM1-203ENST00000505753 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
SIM1-203ENST00000505753 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
SIM1-203ENST00000505753 CACNA1SQ13698 1873 aa11.86□□□□□ -0.51
SIM1-203ENST00000505753 DICER1Q9UPY3 1922 aaKnown RBP11.86□□□□□ -0.51
SIM1-203ENST00000505753 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
SIM1-203ENST00000505753 TAF1P21675 1872 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms