RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 MYH14Q7Z406 1995 aaKnown RBP9.84□□□□□ -0.83
COL4A5-208ENST00000505728 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
COL4A5-208ENST00000505728 RGL2O15211 777 aa9.84□□□□□ -0.83
COL4A5-208ENST00000505728 ITPK1Q13572 414 aa9.84□□□□□ -0.83
COL4A5-208ENST00000505728 HLFQ16534 295 aa9.84□□□□□ -0.83
COL4A5-208ENST00000505728 SLC27A3Q5K4L6 730 aa9.84□□□□□ -0.83
COL4A5-208ENST00000505728 NLRP10Q86W26 655 aa9.84□□□□□ -0.83
COL4A5-208ENST00000505728 ZNF34Q8IZ26 560 aa9.84□□□□□ -0.83
COL4A5-208ENST00000505728 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
COL4A5-208ENST00000505728 PI4K2BQ8TCG2 481 aa9.84□□□□□ -0.83
COL4A5-208ENST00000505728 ECHDC1Q9NTX5 307 aa9.84□□□□□ -0.83
COL4A5-208ENST00000505728 EPB41L2O43491 1005 aaKnown RBP9.83□□□□□ -0.84
COL4A5-208ENST00000505728 REC8O95072 547 aa9.83□□□□□ -0.84
COL4A5-208ENST00000505728 CSF1RP07333 972 aa9.83□□□□□ -0.84
COL4A5-208ENST00000505728 RC3H1Q5TC82 1133 aaKnown RBP9.83□□□□□ -0.84
COL4A5-208ENST00000505728 AACSQ86V21 672 aa9.83□□□□□ -0.84
COL4A5-208ENST00000505728 CNTROBQ8N137 903 aa9.83□□□□□ -0.84
COL4A5-208ENST00000505728 RILPL2Q969X0 211 aa9.83□□□□□ -0.84
COL4A5-208ENST00000505728 AK7Q96M32 723 aa9.83□□□□□ -0.84
COL4A5-208ENST00000505728 USP26Q9BXU7 913 aa9.83□□□□□ -0.84
COL4A5-208ENST00000505728 GPR108Q9NPR9 543 aa9.83□□□□□ -0.84
COL4A5-208ENST00000505728 TBC1D2BQ9UPU7 963 aa9.83□□□□□ -0.84
COL4A5-208ENST00000505728 EYA2O00167 538 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 CIAO1O76071 339 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 HSP90B1P14625 803 aaKnown RBP9.82□□□□□ -0.84
COL4A5-208ENST00000505728 CHMLP26374 656 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 IL15P40933 162 aaPredicted RBP9.82□□□□□ -0.84
COL4A5-208ENST00000505728 PARP10Q53GL7 1025 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 EAF2Q96CJ1 260 aaPredicted RBP9.82□□□□□ -0.84
COL4A5-208ENST00000505728 SIL1Q9H173 461 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 CHMP3Q9Y3E7 222 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 ANKRD36CQ5JPF3 1778 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 UBR3Q6ZT12 1888 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 AK9Q5TCS8 1911 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
COL4A5-208ENST00000505728 PDE8AO60658 829 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 CAMTA2O94983 1202 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 CCDC57Q2TAC2 916 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 TNNI3KQ59H18 835 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 RTL5Q5HYW3 569 aaPredicted RBP9.81□□□□□ -0.84
COL4A5-208ENST00000505728 TSHZ3Q63HK5 1081 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 CLEC4GQ6UXB4 293 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 KLHDC4Q8TBB5 520 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 SLC16A10Q8TF71 515 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 EVI5LQ96CN4 794 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 FAM89AQ96GI7 184 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 ESYT1Q9BSJ8 1104 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 CCDC8Q9H0W5 538 aaPredicted RBP9.81□□□□□ -0.84
COL4A5-208ENST00000505728 TFCP2L1Q9NZI6 479 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 TRMT112Q9UI30 125 aaKnown RBP9.81□□□□□ -0.84
COL4A5-208ENST00000505728 FPGT-TNNI3KV9GXZ4 949 aa9.81□□□□□ -0.84
COL4A5-208ENST00000505728 C4BP0C0L5 1744 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 CEP350Q5VT06 3117 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 IRS4O14654 1257 aaPredicted RBP9.8□□□□□ -0.84
COL4A5-208ENST00000505728 RPS6KA4O75676 772 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 GPTP24298 496 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 HMGB2P26583 209 aaKnown RBP9.8□□□□□ -0.84
COL4A5-208ENST00000505728 TFCP2Q12800 502 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 ATG9AQ7Z3C6 839 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 LINC00116Q8NCU8 138 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 NLGN2Q8NFZ4 835 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 SNX21Q969T3 373 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 UTP14AQ9BVJ6 771 aaKnown RBP9.8□□□□□ -0.84
COL4A5-208ENST00000505728 CCNL1Q9UK58 526 aaPredicted RBP9.8□□□□□ -0.84
COL4A5-208ENST00000505728 ZNF652Q9Y2D9 606 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 MYH3P11055 1940 aa9.8□□□□□ -0.84
COL4A5-208ENST00000505728 COL5A3P25940 1745 aaPredicted RBP9.79□□□□□ -0.84
COL4A5-208ENST00000505728 HIP1O00291 1037 aa9.79□□□□□ -0.84
COL4A5-208ENST00000505728 ATP5JP18859 108 aa9.79□□□□□ -0.84
COL4A5-208ENST00000505728 IFIT5Q13325 482 aaKnown RBP9.79□□□□□ -0.84
COL4A5-208ENST00000505728 TICAM2Q86XR7 235 aa9.79□□□□□ -0.84
COL4A5-208ENST00000505728 COL23A1Q86Y22 540 aaPredicted RBP9.79□□□□□ -0.84
COL4A5-208ENST00000505728 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
COL4A5-208ENST00000505728 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
COL4A5-208ENST00000505728 TTLL11Q8NHH1 800 aa9.79□□□□□ -0.84
COL4A5-208ENST00000505728 RUFY2Q8WXA3 655 aa9.79□□□□□ -0.84
COL4A5-208ENST00000505728 CEP126Q9P2H0 1117 aa9.79□□□□□ -0.84
COL4A5-208ENST00000505728 ANKRD18BA2A2Z9 1011 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 MCCP23508 829 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 POLD1P28340 1107 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 CTSWP56202 376 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 RABEP1Q15276 862 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 GPR162Q16538 588 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 TAF7LQ5H9L4 462 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 SUSD4Q5VX71 490 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 KIF2CQ99661 725 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 AKAP2Q9Y2D5 859 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.78□□□□□ -0.84
COL4A5-208ENST00000505728 UBN2Q6ZU65 1347 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 SH3TC1Q8TE82 1336 aa9.78□□□□□ -0.84
COL4A5-208ENST00000505728 SGSM2O43147 1006 aa9.77□□□□□ -0.85
COL4A5-208ENST00000505728 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
COL4A5-208ENST00000505728 LRRC24Q50LG9 513 aa9.77□□□□□ -0.85
COL4A5-208ENST00000505728 MSL1Q68DK7 614 aa9.77□□□□□ -0.85
COL4A5-208ENST00000505728 AMIGO3Q86WK7 504 aa9.77□□□□□ -0.85
COL4A5-208ENST00000505728 HSCBQ8IWL3 235 aa9.77□□□□□ -0.85
COL4A5-208ENST00000505728 ZNF594Q96JF6 807 aaPredicted RBP9.77□□□□□ -0.85
COL4A5-208ENST00000505728 NARFQ9UHQ1 456 aa9.77□□□□□ -0.85
COL4A5-208ENST00000505728 DBNLQ9UJU6 430 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms