RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 USP44Q9H0E7 712 aa28.9■■■□□ 2.22
SPOCK1-204ENST00000505690 ARFGEF1Q9Y6D6 1849 aa28.9■■■□□ 2.22
SPOCK1-204ENST00000505690 CCDC152Q4G0S7 254 aa28.88■■■□□ 2.21
SPOCK1-204ENST00000505690 TMEM57Q8N5G2 664 aa28.88■■■□□ 2.21
SPOCK1-204ENST00000505690 MYH3P11055 1940 aa28.88■■■□□ 2.21
SPOCK1-204ENST00000505690 SLX4Q8IY92 1834 aa28.87■■■□□ 2.21
SPOCK1-204ENST00000505690 TTLL11Q8NHH1 800 aa28.87■■■□□ 2.21
SPOCK1-204ENST00000505690 PLIN1O60240 522 aa28.86■■■□□ 2.21
SPOCK1-204ENST00000505690 GRIN3BO60391 1043 aa28.86■■■□□ 2.21
SPOCK1-204ENST00000505690 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.86■■■□□ 2.21
SPOCK1-204ENST00000505690 SUCLG2Q96I99 432 aa28.86■■■□□ 2.21
SPOCK1-204ENST00000505690 CCDC85AQ96PX6 553 aaPredicted RBP28.86■■■□□ 2.21
SPOCK1-204ENST00000505690 MS4A1P11836 297 aa28.85■■■□□ 2.21
SPOCK1-204ENST00000505690 RLBP1P12271 317 aa28.85■■■□□ 2.21
SPOCK1-204ENST00000505690 FOXO4P98177 505 aa28.85■■■□□ 2.21
SPOCK1-204ENST00000505690 GRAPQ13588 217 aa28.85■■■□□ 2.21
SPOCK1-204ENST00000505690 GRAPLQ8TC17 118 aaPredicted RBP28.85■■■□□ 2.21
SPOCK1-204ENST00000505690 ZNF219Q9P2Y4 722 aaPredicted RBP28.84■■■□□ 2.21
SPOCK1-204ENST00000505690 C21orf2O43822 256 aa28.83■■■□□ 2.21
SPOCK1-204ENST00000505690 CSF1RP07333 972 aa28.83■■■□□ 2.21
SPOCK1-204ENST00000505690 EPHA10Q5JZY3 1008 aa28.83■■■□□ 2.21
SPOCK1-204ENST00000505690 PPEF1O14829 653 aaPredicted RBP28.82■■■□□ 2.2
SPOCK1-204ENST00000505690 UBTFL1P0CB47 393 aaPredicted RBP28.82■■■□□ 2.2
SPOCK1-204ENST00000505690 PANK1Q8TE04 598 aa28.82■■■□□ 2.2
SPOCK1-204ENST00000505690 C7orf43Q8WVR3 580 aa28.82■■■□□ 2.2
SPOCK1-204ENST00000505690 KAZALD1Q96I82 304 aa28.82■■■□□ 2.2
SPOCK1-204ENST00000505690 MEIS3Q99687 375 aa28.82■■■□□ 2.2
SPOCK1-204ENST00000505690 GREM2Q9H772 168 aa28.82■■■□□ 2.2
SPOCK1-204ENST00000505690 SEC31BQ9NQW1 1179 aa28.82■■■□□ 2.2
SPOCK1-204ENST00000505690 RTL9Q8NET4 1388 aa28.82■■■□□ 2.2
SPOCK1-204ENST00000505690 TAF1P21675 1872 aa28.81■■■□□ 2.2
SPOCK1-204ENST00000505690 BBOX1O75936 387 aa28.81■■■□□ 2.2
SPOCK1-204ENST00000505690 ITPRIPQ8IWB1 547 aa28.81■■■□□ 2.2
SPOCK1-204ENST00000505690 CELF1Q92879 486 aaKnown RBP28.81■■■□□ 2.2
SPOCK1-204ENST00000505690 LMBR1LQ6UX01 489 aa28.8■■■□□ 2.2
SPOCK1-204ENST00000505690 COL4A1P02462 1669 aa28.8■■■□□ 2.2
SPOCK1-204ENST00000505690 GNAI3P08754 354 aa28.79■■■□□ 2.2
SPOCK1-204ENST00000505690 FAM161AQ3B820 660 aa28.79■■■□□ 2.2
SPOCK1-204ENST00000505690 SOGA3Q5TF21 947 aa28.79■■■□□ 2.2
SPOCK1-204ENST00000505690 BICC1Q9H694 974 aaKnown RBP28.79■■■□□ 2.2
SPOCK1-204ENST00000505690 ARHGAP27Q6ZUM4 889 aa28.78■■■□□ 2.2
SPOCK1-204ENST00000505690 CDC5LQ99459 802 aaKnown RBP28.78■■■□□ 2.2
SPOCK1-204ENST00000505690 HDAC5Q9UQL6 1122 aa28.78■■■□□ 2.2
SPOCK1-204ENST00000505690 CHMP3Q9Y3E7 222 aa28.78■■■□□ 2.2
SPOCK1-204ENST00000505690 ITGA6P23229 1130 aa28.77■■■□□ 2.2
SPOCK1-204ENST00000505690 RPS8P62241 208 aaKnown RBP28.77■■■□□ 2.2
SPOCK1-204ENST00000505690 RABL6Q3YEC7 729 aaPredicted RBP28.77■■■□□ 2.2
SPOCK1-204ENST00000505690 CCDC93Q567U6 631 aa28.77■■■□□ 2.2
SPOCK1-204ENST00000505690 TMC4Q7Z404 712 aa28.77■■■□□ 2.2
SPOCK1-204ENST00000505690 ATP6V0A2Q9Y487 856 aa28.77■■■□□ 2.2
SPOCK1-204ENST00000505690 PDE3AQ14432 1141 aa28.76■■■□□ 2.19
SPOCK1-204ENST00000505690 OLFM4Q6UX06 510 aa28.76■■■□□ 2.19
SPOCK1-204ENST00000505690 ANKRD18AQ8IVF6 992 aa28.76■■■□□ 2.19
SPOCK1-204ENST00000505690 ANKRD44Q8N8A2 993 aa28.76■■■□□ 2.19
SPOCK1-204ENST00000505690 RRP1P56182 461 aaKnown RBP28.75■■■□□ 2.19
SPOCK1-204ENST00000505690 CC2D2BQ6DHV5 1058 aa28.75■■■□□ 2.19
SPOCK1-204ENST00000505690 SP8Q8IXZ3 490 aa28.75■■■□□ 2.19
SPOCK1-204ENST00000505690 TMX4Q9H1E5 349 aaPredicted RBP28.75■■■□□ 2.19
SPOCK1-204ENST00000505690 LRRFIP2Q9Y608 721 aaKnown RBP28.75■■■□□ 2.19
SPOCK1-204ENST00000505690 ANKRD18BA2A2Z9 1011 aa28.74■■■□□ 2.19
SPOCK1-204ENST00000505690 IFIT5Q13325 482 aaKnown RBP28.74■■■□□ 2.19
SPOCK1-204ENST00000505690 SLC51AQ86UW1 340 aa28.74■■■□□ 2.19
SPOCK1-204ENST00000505690 MVPQ14764 893 aaKnown RBP28.73■■■□□ 2.19
SPOCK1-204ENST00000505690 C20orf194Q5TEA3 1177 aa28.73■■■□□ 2.19
SPOCK1-204ENST00000505690 COG6Q9Y2V7 657 aa28.73■■■□□ 2.19
SPOCK1-204ENST00000505690 ZBTB7BO15156 539 aaPredicted RBP28.72■■■□□ 2.19
SPOCK1-204ENST00000505690 CCDC57Q2TAC2 916 aa28.72■■■□□ 2.19
SPOCK1-204ENST00000505690 RTKN2Q8IZC4 609 aa28.72■■■□□ 2.19
SPOCK1-204ENST00000505690 FER1L6Q2WGJ9 1857 aa28.72■■■□□ 2.19
SPOCK1-204ENST00000505690 SNED1Q8TER0 1413 aa28.71■■■□□ 2.19
SPOCK1-204ENST00000505690 NFKBIEO00221 500 aa28.71■■■□□ 2.19
SPOCK1-204ENST00000505690 IGHMBP2P38935 993 aaKnown RBP28.71■■■□□ 2.19
SPOCK1-204ENST00000505690 LRRC37AA6NMS7 1700 aa28.71■■■□□ 2.19
SPOCK1-204ENST00000505690 GNAI2P04899 355 aa28.7■■■□□ 2.18
SPOCK1-204ENST00000505690 RASSF7Q02833 373 aa28.7■■■□□ 2.18
SPOCK1-204ENST00000505690 GRIPAP1Q4V328 841 aa28.7■■■□□ 2.18
SPOCK1-204ENST00000505690 TAOK3Q9H2K8 898 aa28.69■■■□□ 2.18
SPOCK1-204ENST00000505690 DDX19BQ9UMR2 479 aa28.69■■■□□ 2.18
SPOCK1-204ENST00000505690 SPEF2Q9C093 1822 aa28.69■■■□□ 2.18
SPOCK1-204ENST00000505690 TAF7LQ5H9L4 462 aa28.68■■■□□ 2.18
SPOCK1-204ENST00000505690 BSDC1Q9NW68 430 aaPredicted RBP28.68■■■□□ 2.18
SPOCK1-204ENST00000505690 GOLGB1Q14789 3259 aaKnown RBP28.68■■■□□ 2.18
SPOCK1-204ENST00000505690 LTBP3Q9NS15 1303 aa28.68■■■□□ 2.18
SPOCK1-204ENST00000505690 FKBP4Q02790 459 aaKnown RBP eCLIP28.67■■■□□ 2.18
SPOCK1-204ENST00000505690 MPHOSPH8Q99549 860 aa28.67■■■□□ 2.18
SPOCK1-204ENST00000505690 MPNDQ8N594 471 aa28.66■■■□□ 2.18
SPOCK1-204ENST00000505690 ZNF594Q96JF6 807 aaPredicted RBP28.66■■■□□ 2.18
SPOCK1-204ENST00000505690 PSMD1Q99460 953 aa28.65■■■□□ 2.18
SPOCK1-204ENST00000505690 DPP8Q6V1X1 898 aaPredicted RBP28.64■■■□□ 2.18
SPOCK1-204ENST00000505690 CHMP4BQ9H444 224 aaKnown RBP28.64■■■□□ 2.18
SPOCK1-204ENST00000505690 GPSM2P81274 684 aa28.63■■■□□ 2.17
SPOCK1-204ENST00000505690 C1orf115Q9H7X2 142 aa28.63■■■□□ 2.17
SPOCK1-204ENST00000505690 MINPP1Q9UNW1 487 aa28.63■■■□□ 2.17
SPOCK1-204ENST00000505690 NSFL1CQ9UNZ2 370 aaKnown RBP28.63■■■□□ 2.17
SPOCK1-204ENST00000505690 CHD4Q14839 1912 aa28.63■■■□□ 2.17
SPOCK1-204ENST00000505690 RFX5P48382 616 aaPredicted RBP28.62■■■□□ 2.17
SPOCK1-204ENST00000505690 PRELPP51888 382 aa28.62■■■□□ 2.17
SPOCK1-204ENST00000505690 MTX1Q13505 466 aa28.62■■■□□ 2.17
SPOCK1-204ENST00000505690 LDHAL6AQ6ZMR3 332 aa28.62■■■□□ 2.17
SPOCK1-204ENST00000505690 SUPT16HQ9Y5B9 1047 aaKnown RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms