RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 TCP10L2B9ZVM9 353 aa5.96□□□□□ -1.46
MATR3-211ENST00000505625 FAM13AO94988 1023 aa5.96□□□□□ -1.46
MATR3-211ENST00000505625 ITKQ08881 620 aa5.96□□□□□ -1.46
MATR3-211ENST00000505625 CCDC114Q96M63 670 aa5.96□□□□□ -1.46
MATR3-211ENST00000505625 PAIP2Q9BPZ3 127 aaKnown RBP5.96□□□□□ -1.46
MATR3-211ENST00000505625 RBM27Q9P2N5 1060 aaKnown RBP5.96□□□□□ -1.46
MATR3-211ENST00000505625 CFAP45Q9UL16 551 aa5.96□□□□□ -1.46
MATR3-211ENST00000505625 PRG4Q92954 1404 aaPredicted RBP5.96□□□□□ -1.46
MATR3-211ENST00000505625 MARCKSP29966 332 aaPredicted RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 UTP14CQ5TAP6 766 aaKnown RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 ZNF772Q68DY9 489 aaPredicted RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 OLA1Q9NTK5 396 aaKnown RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 SLC12A7Q9Y666 1083 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 KIF21AQ7Z4S6 1674 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 USP47Q96K76 1375 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 UFL1O94874 794 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 KRT5P13647 590 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 FOXD4Q12950 439 aaPredicted RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 AAMPQ13685 434 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 BOLA2Q9H3K6 86 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 KIF4AO95239 1232 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 SSRP1Q08945 709 aaKnown RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 TMEM259Q4ZIN3 620 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 HSP90B2PQ58FF3 399 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 DPP8Q6V1X1 898 aaPredicted RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 KIFC2Q96AC6 838 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 RPGRIP1LQ68CZ1 1315 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 TTC21AQ8NDW8 1320 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 RAPGEF2Q9Y4G8 1499 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 BNIP3LO60238 219 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 ZBTB7AO95365 584 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 KRT19P08727 400 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 ZCRB1Q8TBF4 217 aaKnown RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 JAKMIP2Q96AA8 810 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 PPP1R9BQ96SB3 815 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 EYA3Q99504 573 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 SNRKQ9NRH2 765 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 NFE2L2Q16236 605 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 PPP1R16BQ96T49 567 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 SRCIN1Q9C0H9 1055 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 TNIKQ9UKE5 1360 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 IFIT3O14879 490 aaKnown RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 TBCAO75347 108 aaKnown RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 SLC4A1P02730 911 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 RUNDC1Q96C34 613 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 CALML4Q96GE6 196 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 GCNAQ96QF7 691 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 CRNKL1Q9BZJ0 848 aaKnown RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 IL1RAPL2Q9NP60 686 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 RNF216Q9NWF9 866 aaPredicted RBP5.95□□□□□ -1.46
MATR3-211ENST00000505625 ANKFY1Q9P2R3 1169 aa5.95□□□□□ -1.46
MATR3-211ENST00000505625 CCDC50Q8IVM0 306 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 JMYQ8N9B5 988 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 CNBD1Q8NA66 436 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 ZNF692Q9BU19 519 aaPredicted RBP5.94□□□□□ -1.46
MATR3-211ENST00000505625 ACBD3Q9H3P7 528 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 GPCPD1Q9NPB8 672 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 SFMBT1Q9UHJ3 866 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 SPDYE3A6NKU9 549 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 ZEB2O60315 1214 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 CALML3P27482 149 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 NUCB1Q02818 461 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 MCM10Q7L590 875 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 GSTA5Q7RTV2 222 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 SMC1BQ8NDV3 1235 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 CHAMP1Q96JM3 812 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 RIOK1Q9BRS2 568 aaKnown RBP5.94□□□□□ -1.46
MATR3-211ENST00000505625 LRRCC1Q9C099 1032 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 PDE6AP16499 860 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 SLC9A5Q14940 896 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 ATAD2Q6PL18 1390 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 CDKL5O76039 1030 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 RNF217Q8TC41 542 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 ANKRD24Q8TF21 1146 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 CCDC194A0A1B0GVG4 234 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 CCDC169A6NNP5 214 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 MYL3P08590 195 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 CYP7A1P22680 504 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 XPAP23025 273 aaPredicted RBP5.94□□□□□ -1.46
MATR3-211ENST00000505625 LDHAL6AQ6ZMR3 332 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 ARMC9Q7Z3E5 817 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 DZIP3Q86Y13 1208 aaKnown RBP5.94□□□□□ -1.46
MATR3-211ENST00000505625 PNISRQ8TF01 805 aaKnown RBP5.94□□□□□ -1.46
MATR3-211ENST00000505625 IMPG2Q9BZV3 1241 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 DDX19BQ9UMR2 479 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 BZW2Q9Y6E2 419 aaKnown RBP5.94□□□□□ -1.46
MATR3-211ENST00000505625 SCAPERQ9BY12 1400 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 TFRCP02786 760 aaKnown RBP5.94□□□□□ -1.46
MATR3-211ENST00000505625 ZNF18P17022 549 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 SLC8A3P57103 927 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 DIXDC1Q155Q3 683 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 TDRD12Q587J7 1177 aaKnown RBP5.94□□□□□ -1.46
MATR3-211ENST00000505625 CADPS2Q86UW7 1296 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 YAF2Q8IY57 180 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 NOB1Q9ULX3 412 aaKnown RBP5.94□□□□□ -1.46
MATR3-211ENST00000505625 TRPC6Q9Y210 931 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 AFG3L2Q9Y4W6 797 aa5.94□□□□□ -1.46
MATR3-211ENST00000505625 ESYT2A0FGR8 921 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 ZNF213O14771 459 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 LDHCP07864 332 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms