RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 SMC3Q9UQE7 1217 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 LIG1P18858 919 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 SRLQ86TD4 932 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 NCAPGQ9BPX3 1015 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 NPHP1O15259 732 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 GUCY2CP25092 1073 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 HOXC9P31274 260 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 GYS2P54840 703 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 GPS2Q13227 327 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 ARID5BQ14865 1188 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 MRFAP1L1Q96HT8 127 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 USP31Q70CQ4 1352 aa15.58■□□□□ 0.09
LETM1-203ENST00000505551 POLR3GO15318 223 aaPredicted RBP15.58■□□□□ 0.08
LETM1-203ENST00000505551 MAFGO15525 162 aa15.58■□□□□ 0.08
LETM1-203ENST00000505551 ATP8B1O43520 1251 aa15.58■□□□□ 0.08
LETM1-203ENST00000505551 CAMK4Q16566 473 aa15.58■□□□□ 0.08
LETM1-203ENST00000505551 MYCBPQ99417 103 aaPredicted RBP15.58■□□□□ 0.08
LETM1-203ENST00000505551 TNMDQ9H2S6 317 aa15.58■□□□□ 0.08
LETM1-203ENST00000505551 EXOC6BQ9Y2D4 811 aa15.58■□□□□ 0.08
LETM1-203ENST00000505551 MSH6P52701 1360 aa15.58■□□□□ 0.08
LETM1-203ENST00000505551 FILIP1Q7Z7B0 1213 aa15.58■□□□□ 0.08
LETM1-203ENST00000505551 TTC6Q86TZ1 520 aa15.58■□□□□ 0.08
LETM1-203ENST00000505551 PROSER2Q86WR7 435 aaPredicted RBP15.58■□□□□ 0.08
LETM1-203ENST00000505551 LRRN4CLQ8ND94 238 aa15.58■□□□□ 0.08
LETM1-203ENST00000505551 CKAP2LQ8IYA6 745 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 IQUBQ8NA54 791 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 DDX17Q92841 729 aaKnown RBP15.57■□□□□ 0.08
LETM1-203ENST00000505551 LIMCH1Q9UPQ0 1083 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 SETD1BQ9UPS6 1966 aaKnown RBP15.57■□□□□ 0.08
LETM1-203ENST00000505551 PEAK1Q9H792 1746 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 FLT4P35916 1363 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 ZNF165P49910 485 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 ARHGAP29Q52LW3 1261 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 TMCO3Q6UWJ1 677 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 RUFY3Q7L099 469 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 FBXO18Q8NFZ0 1043 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 GOLGA5Q8TBA6 731 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 TOMM22Q9NS69 142 aa15.57■□□□□ 0.08
LETM1-203ENST00000505551 ARGLU1Q9NWB6 273 aaPredicted RBP15.57■□□□□ 0.08
LETM1-203ENST00000505551 CAVIN2O95810 425 aa15.56■□□□□ 0.08
LETM1-203ENST00000505551 AK2P54819 239 aa15.56■□□□□ 0.08
LETM1-203ENST00000505551 DDX19AQ9NUU7 478 aaKnown RBP15.56■□□□□ 0.08
LETM1-203ENST00000505551 TRMT1Q9NXH9 659 aaKnown RBP15.56■□□□□ 0.08
LETM1-203ENST00000505551 PLEKHG2Q9H7P9 1386 aa15.56■□□□□ 0.08
LETM1-203ENST00000505551 CCDC69A6NI79 296 aa15.56■□□□□ 0.08
LETM1-203ENST00000505551 HMMRO75330 724 aa15.56■□□□□ 0.08
LETM1-203ENST00000505551 CLSTN2Q9H4D0 955 aa15.56■□□□□ 0.08
LETM1-203ENST00000505551 TSPYL4Q9UJ04 414 aa15.56■□□□□ 0.08
LETM1-203ENST00000505551 RRP15Q9Y3B9 282 aaKnown RBP15.56■□□□□ 0.08
LETM1-203ENST00000505551 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.56■□□□□ 0.083e-9■■■□□ 18.4
LETM1-203ENST00000505551 SBNO1A3KN83 1393 aa15.55■□□□□ 0.08
LETM1-203ENST00000505551 PSD3Q9NYI0 1048 aa15.55■□□□□ 0.08
LETM1-203ENST00000505551 HSPA2P54652 639 aa15.55■□□□□ 0.08
LETM1-203ENST00000505551 TSHZ3Q63HK5 1081 aa15.55■□□□□ 0.08
LETM1-203ENST00000505551 LRRC59Q96AG4 307 aaKnown RBP15.55■□□□□ 0.08
LETM1-203ENST00000505551 MEIS3Q99687 375 aa15.55■□□□□ 0.08
LETM1-203ENST00000505551 DACT1Q9NYF0 836 aa15.55■□□□□ 0.08
LETM1-203ENST00000505551 ORC3Q9UBD5 711 aaPredicted RBP15.55■□□□□ 0.08
LETM1-203ENST00000505551 CHL1O00533 1208 aa15.54■□□□□ 0.08
LETM1-203ENST00000505551 GJB2P29033 226 aa15.54■□□□□ 0.08
LETM1-203ENST00000505551 GOLGA6L1Q8N7Z2 621 aa15.54■□□□□ 0.08
LETM1-203ENST00000505551 CEP120Q8N960 986 aa15.54■□□□□ 0.08
LETM1-203ENST00000505551 DNAJC25Q9H1X3 360 aa15.54■□□□□ 0.08
LETM1-203ENST00000505551 TOPAZ1Q8N9V7 1692 aa15.54■□□□□ 0.08
LETM1-203ENST00000505551 OAS2P29728 719 aaKnown RBP15.54■□□□□ 0.08
LETM1-203ENST00000505551 KRT85P78386 507 aa15.54■□□□□ 0.08
LETM1-203ENST00000505551 SNW1Q13573 536 aaKnown RBP15.54■□□□□ 0.08
LETM1-203ENST00000505551 HSP90AB3PQ58FF7 597 aa15.54■□□□□ 0.08
LETM1-203ENST00000505551 REXO1L1PQ8IX06 675 aa15.54■□□□□ 0.08
LETM1-203ENST00000505551 A0A1B0GUL7 405 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 IQCB1Q15051 598 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 TSGA10IPQ3SY00 556 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 RNF217Q8TC41 542 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 IL25Q9H293 177 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 SNX14Q9Y5W7 946 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 NRKQ7Z2Y5 1582 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 GOLIM4O00461 696 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 JRKLQ9Y4A0 524 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 DLG5Q8TDM6 1919 aa15.53■□□□□ 0.08
LETM1-203ENST00000505551 NBPF11Q86T75 865 aa15.52■□□□□ 0.08
LETM1-203ENST00000505551 EXOC4Q96A65 974 aa15.52■□□□□ 0.08
LETM1-203ENST00000505551 ZBTB12Q9Y330 459 aaPredicted RBP15.52■□□□□ 0.08
LETM1-203ENST00000505551 LARGE1O95461 756 aa15.52■□□□□ 0.08
LETM1-203ENST00000505551 TUBB4AP04350 444 aa15.52■□□□□ 0.08
LETM1-203ENST00000505551 STAP2Q9UGK3 403 aa15.52■□□□□ 0.08
LETM1-203ENST00000505551 CHMP3Q9Y3E7 222 aa15.52■□□□□ 0.08
LETM1-203ENST00000505551 TBC1D8O95759 1140 aa15.52■□□□□ 0.07
LETM1-203ENST00000505551 NBPF6Q5VWK0 638 aa15.52■□□□□ 0.07
LETM1-203ENST00000505551 SLC4A10Q6U841 1118 aa15.52■□□□□ 0.07
LETM1-203ENST00000505551 RILPL2Q969X0 211 aa15.52■□□□□ 0.07
LETM1-203ENST00000505551 AK7Q96M32 723 aa15.52■□□□□ 0.07
LETM1-203ENST00000505551 NBPF4Q96M43 638 aa15.52■□□□□ 0.07
LETM1-203ENST00000505551 DNAJC5Q9H3Z4 198 aa15.52■□□□□ 0.07
LETM1-203ENST00000505551 F6X3S4 739 aa15.51■□□□□ 0.07
LETM1-203ENST00000505551 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
LETM1-203ENST00000505551 NPHP3Q7Z494 1330 aa15.51■□□□□ 0.07
LETM1-203ENST00000505551 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
LETM1-203ENST00000505551 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
LETM1-203ENST00000505551 IGSF1Q8N6C5 1336 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms