RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 CT47A1Q5JQC4 288 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 C16orf86Q6ZW13 317 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 LILRB2Q8N423 598 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 ZNF296Q8WUU4 475 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 BCO2Q9BYV7 579 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 TMPRSS4Q9NRS4 437 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 GEMIN8Q9NWZ8 242 aaKnown RBP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 PRKAG3Q9UGI9 489 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 ADAMTS1Q9UHI8 967 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 FOXD3Q9UJU5 478 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 EID1Q9Y6B2 187 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 PARP3Q9Y6F1 533 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 SMAD7O15105 426 aaKnown RBP4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 PHACTR2O75167 634 aa4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 RTN1Q16799 776 aa4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 CCDC81Q6ZN84 652 aa4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 TSHZ1Q6ZSZ6 1077 aa4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 LRP10Q7Z4F1 713 aa4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 SLC4A9Q96Q91 983 aa4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 FEZ1Q99689 392 aa4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 UBA5Q9GZZ9 404 aa4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 TSR3Q9UJK0 312 aaKnown RBP4.8□□□□□ -1.64
HMGB1P22-201ENST00000505315 SNPHO15079 494 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 GNRH1P01148 92 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 PAX3P23760 479 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 BCAMP50895 628 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 FAM160A1Q05DH4 1040 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 APOBRQ0VD83 1088 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 CBLBQ13191 982 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 C21orf62-AS1Q17RA5 79 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 TNNI3KQ59H18 835 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 SNAP47Q5SQN1 464 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 SH3PXD2AQ5TCZ1 1133 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 SPTY2D1Q68D10 685 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 ZNF438Q7Z4V0 828 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 TRMT44Q8IYL2 757 aaKnown RBP4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 PGBD3Q8N328 593 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 NBPF15Q8N660 670 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 EAF1Q96JC9 268 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 CRBNQ96SW2 442 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 RSRP1Q9BUV0 290 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 SRRTQ9BXP5 876 aaKnown RBP4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 PHACTR1Q9C0D0 580 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 SRCIN1Q9C0H9 1055 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 ARHGEF10LQ9HCE6 1279 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 NPHS2Q9NP85 383 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 PFDN2Q9UHV9 154 aa4.79□□□□□ -1.64
HMGB1P22-201ENST00000505315 A0A0U1RQG5 324 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 CDK2AP1O14519 115 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 TLL1O43897 1013 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 TNFRSF21O75509 655 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 ADH1BP00325 375 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 KRT18P05783 430 aaKnown RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 GSTT1P30711 240 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 HDAC1Q13547 482 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 SEPT6Q14141 434 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 BRD3Q15059 726 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 PPP2R5AQ15172 486 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 TCEA2Q15560 299 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 FOXD4L6Q3SYB3 417 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 MTERF2Q49AM1 385 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 LARP1BQ659C4 914 aaKnown RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 FOXD4L3Q6VB84 417 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 KIAA0907Q7Z7F0 614 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 PPARGC1BQ86YN6 1023 aaKnown RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 SNX29Q8TEQ0 813 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 TSR2Q969E8 191 aaKnown RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 NKD1Q969G9 470 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 L3MBTL2Q969R5 705 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 C8orf48Q96LL4 319 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 TMEM74Q96NL1 305 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 MPHOSPH6Q99547 160 aaKnown RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 NOC4LQ9BVI4 516 aaKnown RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 C1QTNF2Q9BXJ5 285 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 SLC6A16Q9GZN6 736 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 CCDC113Q9H0I3 377 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 RBSNQ9H1K0 784 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 TERF2IPQ9NYB0 399 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 AKAP2Q9Y2D5 859 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 FNDC3AQ9Y2H6 1198 aaKnown RBP4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 LEMD3Q9Y2U8 911 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 COMMD10Q9Y6G5 202 aa4.78□□□□□ -1.64
HMGB1P22-201ENST00000505315 EML1O00423 815 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 PDPK1O15530 556 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 WDHD1O75717 1129 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 ASMTLO95671 621 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 FSHRP23945 695 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 GTF2E1P29083 439 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 MCM4P33991 863 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 SOX9P48436 509 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 EIF6P56537 245 aaKnown RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 SH3BP2P78314 561 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 DHX9Q08211 1270 aaKnown RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 COL9A2Q14055 689 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 PPP2R5EQ16537 467 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 TKFCQ3LXA3 575 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 VARS2Q5ST30 1063 aaKnown RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 ZFYVE27Q5T4F4 411 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 CMTR1Q8N1G2 835 aaKnown RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 CELF2-AS1Q8N7Q2 184 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms