RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
NR1I3-220ENST00000505005 BEND3Q5T5X7 828 aa12.43□□□□□ -0.42
NR1I3-220ENST00000505005 G2E3Q7L622 706 aa12.43□□□□□ -0.42
NR1I3-220ENST00000505005 JDP2Q8WYK2 163 aa12.43□□□□□ -0.42
NR1I3-220ENST00000505005 SSH1Q8WYL5 1049 aa12.43□□□□□ -0.42
NR1I3-220ENST00000505005 CHMP4BQ9H444 224 aaKnown RBP12.43□□□□□ -0.42
NR1I3-220ENST00000505005 ATP6V0A2Q9Y487 856 aa12.43□□□□□ -0.42
NR1I3-220ENST00000505005 GRM8O00222 908 aa12.42□□□□□ -0.42
NR1I3-220ENST00000505005 TCERG1O14776 1098 aaKnown RBP12.42□□□□□ -0.42
NR1I3-220ENST00000505005 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
NR1I3-220ENST00000505005 HCLS1P14317 486 aaPredicted RBP12.42□□□□□ -0.42
NR1I3-220ENST00000505005 SLC4A10Q6U841 1118 aa12.42□□□□□ -0.42
NR1I3-220ENST00000505005 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
NR1I3-220ENST00000505005 C7orf43Q8WVR3 580 aa12.42□□□□□ -0.42
NR1I3-220ENST00000505005 EYA3Q99504 573 aa12.42□□□□□ -0.42
NR1I3-220ENST00000505005 RTL9Q8NET4 1388 aa12.42□□□□□ -0.42
NR1I3-220ENST00000505005 ABCC12Q96J65 1359 aa12.42□□□□□ -0.42
NR1I3-220ENST00000505005 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
NR1I3-220ENST00000505005 RARSP54136 660 aaKnown RBP12.41□□□□□ -0.42
NR1I3-220ENST00000505005 CTSWP56202 376 aa12.41□□□□□ -0.42
NR1I3-220ENST00000505005 C9orf131Q5VYM1 1079 aa12.41□□□□□ -0.42
NR1I3-220ENST00000505005 ANKRD18AQ8IVF6 992 aa12.41□□□□□ -0.42
NR1I3-220ENST00000505005 MPNDQ8N594 471 aa12.41□□□□□ -0.42
NR1I3-220ENST00000505005 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.41□□□□□ -0.42
NR1I3-220ENST00000505005 RNF181Q9P0P0 153 aa12.41□□□□□ -0.42
NR1I3-220ENST00000505005 ATXN8OSP0DMR3 200 aa12.4□□□□□ -0.42
NR1I3-220ENST00000505005 CWF19L2Q2TBE0 894 aaKnown RBP12.4□□□□□ -0.42
NR1I3-220ENST00000505005 DPP8Q6V1X1 898 aaPredicted RBP12.4□□□□□ -0.42
NR1I3-220ENST00000505005 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
NR1I3-220ENST00000505005 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
NR1I3-220ENST00000505005 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
NR1I3-220ENST00000505005 LAMB2P55268 1798 aa12.4□□□□□ -0.42
NR1I3-220ENST00000505005 ABCC4O15439 1325 aa12.39□□□□□ -0.43
NR1I3-220ENST00000505005 MYH3P11055 1940 aa12.39□□□□□ -0.43
NR1I3-220ENST00000505005 ANKRD18BA2A2Z9 1011 aa12.39□□□□□ -0.43
NR1I3-220ENST00000505005 GNAI3P08754 354 aa12.39□□□□□ -0.43
NR1I3-220ENST00000505005 IFIT5Q13325 482 aaKnown RBP12.39□□□□□ -0.43
NR1I3-220ENST00000505005 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
NR1I3-220ENST00000505005 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
NR1I3-220ENST00000505005 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
NR1I3-220ENST00000505005 FER1L6Q2WGJ9 1857 aa12.39□□□□□ -0.43
NR1I3-220ENST00000505005 SLX4Q8IY92 1834 aa12.39□□□□□ -0.43
NR1I3-220ENST00000505005 UTYO14607 1347 aa12.38□□□□□ -0.43
NR1I3-220ENST00000505005 CSF1RP07333 972 aa12.38□□□□□ -0.43
NR1I3-220ENST00000505005 RTL5Q5HYW3 569 aaPredicted RBP12.38□□□□□ -0.43
NR1I3-220ENST00000505005 SYNE4Q8N205 404 aa12.38□□□□□ -0.43
NR1I3-220ENST00000505005 TTLL11Q8NHH1 800 aa12.38□□□□□ -0.43
NR1I3-220ENST00000505005 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
NR1I3-220ENST00000505005 BSDC1Q9NW68 430 aaPredicted RBP12.38□□□□□ -0.43
NR1I3-220ENST00000505005 WWC3Q9ULE0 1092 aa12.38□□□□□ -0.43
NR1I3-220ENST00000505005 NOB1Q9ULX3 412 aaKnown RBP12.38□□□□□ -0.43
NR1I3-220ENST00000505005 COL11A2P13942 1736 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-220ENST00000505005 IQCA1LA6NCM1 817 aa12.37□□□□□ -0.43
NR1I3-220ENST00000505005 F6X3S4 739 aa12.37□□□□□ -0.43
NR1I3-220ENST00000505005 IARSP41252 1262 aaKnown RBP12.37□□□□□ -0.43
NR1I3-220ENST00000505005 EIF6P56537 245 aaKnown RBP12.37□□□□□ -0.43
NR1I3-220ENST00000505005 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
NR1I3-220ENST00000505005 ATF7IPQ6VMQ6 1270 aa12.37□□□□□ -0.43
NR1I3-220ENST00000505005 C16orf71Q8IYS4 520 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-220ENST00000505005 PODXL2Q9NZ53 605 aa12.37□□□□□ -0.43
NR1I3-220ENST00000505005 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-220ENST00000505005 SBF1O95248 1867 aa12.37□□□□□ -0.43
NR1I3-220ENST00000505005 DICER1Q9UPY3 1922 aaKnown RBP12.37□□□□□ -0.43
NR1I3-220ENST00000505005 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 G3V3G9 751 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 NFKBIEO00221 500 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 ATP2B4P23634 1241 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 MMP14P50281 582 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 DCAF8Q5TAQ9 597 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 FTSJ3Q8IY81 847 aaKnown RBP12.36□□□□□ -0.43
NR1I3-220ENST00000505005 NIM1KQ8IY84 436 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 LARGE2Q8N3Y3 721 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
NR1I3-220ENST00000505005 ZC3H12CQ9C0D7 883 aaKnown RBP12.36□□□□□ -0.43
NR1I3-220ENST00000505005 ANKIB1Q9P2G1 1089 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 NSFL1CQ9UNZ2 370 aaKnown RBP12.36□□□□□ -0.43
NR1I3-220ENST00000505005 LEMD3Q9Y2U8 911 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
NR1I3-220ENST00000505005 CACNA1SQ13698 1873 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 XDHP47989 1333 aa12.36□□□□□ -0.43
NR1I3-220ENST00000505005 UBTFL1P0CB47 393 aaPredicted RBP12.35□□□□□ -0.43
NR1I3-220ENST00000505005 TNIP1Q15025 636 aa12.35□□□□□ -0.43
NR1I3-220ENST00000505005 WASHC4Q2M389 1173 aa12.35□□□□□ -0.43
NR1I3-220ENST00000505005 INTS3Q68E01 1043 aaKnown RBP12.35□□□□□ -0.43
NR1I3-220ENST00000505005 VEGFAP15692 232 aaPredicted RBP12.34□□□□□ -0.43
NR1I3-220ENST00000505005 ITGA6P23229 1130 aa12.34□□□□□ -0.43
NR1I3-220ENST00000505005 CASP7P55210 303 aa12.34□□□□□ -0.43
NR1I3-220ENST00000505005 BCL2L13Q9BXK5 485 aa12.34□□□□□ -0.43
NR1I3-220ENST00000505005 GGA1Q9UJY5 639 aa12.34□□□□□ -0.43
NR1I3-220ENST00000505005 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
NR1I3-220ENST00000505005 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
NR1I3-220ENST00000505005 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
NR1I3-220ENST00000505005 C6orf229H3BNL8 230 aa12.33□□□□□ -0.44
NR1I3-220ENST00000505005 PPIP5K2O43314 1243 aa12.33□□□□□ -0.44
NR1I3-220ENST00000505005 KIAA2012Q0VF49 1180 aa12.33□□□□□ -0.44
NR1I3-220ENST00000505005 GPC2Q8N158 579 aa12.33□□□□□ -0.44
NR1I3-220ENST00000505005 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.44
NR1I3-220ENST00000505005 CELF1Q92879 486 aaKnown RBP12.33□□□□□ -0.44
NR1I3-220ENST00000505005 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms