RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 RARSP54136 660 aaKnown RBP25.65■■□□□ 1.7
HERC6-205ENST00000504905 ZNF219Q9P2Y4 722 aaPredicted RBP25.65■■□□□ 1.7
HERC6-205ENST00000504905 SLC4A10Q6U841 1118 aa25.64■■□□□ 1.7
HERC6-205ENST00000504905 JARID2Q92833 1246 aaPredicted RBP25.64■■□□□ 1.7
HERC6-205ENST00000504905 C21orf2O43822 256 aa25.63■■□□□ 1.69
HERC6-205ENST00000504905 GCKRQ14397 625 aa25.63■■□□□ 1.69
HERC6-205ENST00000504905 BEND3Q5T5X7 828 aa25.63■■□□□ 1.69
HERC6-205ENST00000504905 NFKBIEO00221 500 aa25.62■■□□□ 1.69
HERC6-205ENST00000504905 CRAMP1Q96RY5 1269 aa25.62■■□□□ 1.69
HERC6-205ENST00000504905 CDHR2Q9BYE9 1310 aa25.62■■□□□ 1.69
HERC6-205ENST00000504905 TIAM2Q8IVF5 1701 aa25.61■■□□□ 1.69
HERC6-205ENST00000504905 BRPF1P55201 1214 aaPredicted RBP25.61■■□□□ 1.69
HERC6-205ENST00000504905 MYH3P11055 1940 aa25.61■■□□□ 1.69
HERC6-205ENST00000504905 PDE8AO60658 829 aa25.6■■□□□ 1.69
HERC6-205ENST00000504905 SOGA3Q5TF21 947 aa25.6■■□□□ 1.69
HERC6-205ENST00000504905 DDX46Q7L014 1031 aaKnown RBP25.6■■□□□ 1.69
HERC6-205ENST00000504905 UBE3BQ7Z3V4 1068 aa25.6■■□□□ 1.69
HERC6-205ENST00000504905 CCDC88AQ3V6T2 1871 aa25.6■■□□□ 1.69
HERC6-205ENST00000504905 H7C1W4 665 aa25.59■■□□□ 1.69
HERC6-205ENST00000504905 SF3B3Q15393 1217 aaKnown RBP25.59■■□□□ 1.69
HERC6-205ENST00000504905 SRCIN1Q9C0H9 1055 aa25.59■■□□□ 1.69
HERC6-205ENST00000504905 NOB1Q9ULX3 412 aaKnown RBP25.59■■□□□ 1.69
HERC6-205ENST00000504905 FER1L6Q2WGJ9 1857 aa25.59■■□□□ 1.69
HERC6-205ENST00000504905 KIF16BQ96L93 1317 aa25.59■■□□□ 1.69
HERC6-205ENST00000504905 ALDH1L1O75891 902 aa25.58■■□□□ 1.69
HERC6-205ENST00000504905 ABCC4O15439 1325 aa25.58■■□□□ 1.69
HERC6-205ENST00000504905 TAF1P21675 1872 aa25.57■■□□□ 1.68
HERC6-205ENST00000504905 POTECB2RU33 542 aa25.57■■□□□ 1.68
HERC6-205ENST00000504905 C7orf43Q8WVR3 580 aa25.57■■□□□ 1.68
HERC6-205ENST00000504905 PPEF1O14829 653 aaPredicted RBP25.56■■□□□ 1.68
HERC6-205ENST00000504905 CCDC93Q567U6 631 aa25.56■■□□□ 1.68
HERC6-205ENST00000504905 DPY19L2Q6NUT2 758 aa25.56■■□□□ 1.68
HERC6-205ENST00000504905 TNS4Q8IZW8 715 aa25.56■■□□□ 1.68
HERC6-205ENST00000504905 GRAPQ13588 217 aa25.55■■□□□ 1.68
HERC6-205ENST00000504905 CCDC152Q4G0S7 254 aa25.55■■□□□ 1.68
HERC6-205ENST00000504905 GRAPLQ8TC17 118 aaPredicted RBP25.55■■□□□ 1.68
HERC6-205ENST00000504905 API5Q9BZZ5 524 aaKnown RBP25.55■■□□□ 1.68
HERC6-205ENST00000504905 BCAR3O75815 825 aa25.54■■□□□ 1.68
HERC6-205ENST00000504905 CTSWP56202 376 aa25.54■■□□□ 1.68
HERC6-205ENST00000504905 C9orf78Q9NZ63 289 aaPredicted RBP25.54■■□□□ 1.68
HERC6-205ENST00000504905 GRM8O00222 908 aa25.53■■□□□ 1.68
HERC6-205ENST00000504905 BBOX1O75936 387 aa25.53■■□□□ 1.68
HERC6-205ENST00000504905 CASP7P55210 303 aa25.53■■□□□ 1.68
HERC6-205ENST00000504905 OLFM4Q6UX06 510 aa25.53■■□□□ 1.68
HERC6-205ENST00000504905 TMX4Q9H1E5 349 aaPredicted RBP25.53■■□□□ 1.68
HERC6-205ENST00000504905 IPO8O15397 1037 aaKnown RBP25.52■■□□□ 1.68
HERC6-205ENST00000504905 CC2D2BQ6DHV5 1058 aa25.52■■□□□ 1.68
HERC6-205ENST00000504905 RTKN2Q8IZC4 609 aa25.52■■□□□ 1.68
HERC6-205ENST00000504905 ARHGAP45Q92619 1136 aa25.52■■□□□ 1.68
HERC6-205ENST00000504905 CCDC85AQ96PX6 553 aaPredicted RBP25.52■■□□□ 1.68
HERC6-205ENST00000504905 PLA2G12BQ9BX93 195 aa25.52■■□□□ 1.68
HERC6-205ENST00000504905 TAOK3Q9H2K8 898 aa25.52■■□□□ 1.68
HERC6-205ENST00000504905 DICER1Q9UPY3 1922 aaKnown RBP25.51■■□□□ 1.67
HERC6-205ENST00000504905 HSPA1AP0DMV8 641 aaKnown RBP25.51■■□□□ 1.67
HERC6-205ENST00000504905 HSPA1BP0DMV9 641 aaKnown RBP25.51■■□□□ 1.67
HERC6-205ENST00000504905 YTHDC1Q96MU7 727 aaKnown RBP25.51■■□□□ 1.67
HERC6-205ENST00000504905 LTBP3Q9NS15 1303 aa25.51■■□□□ 1.67
HERC6-205ENST00000504905 FRAT1Q92837 279 aaPredicted RBP25.5■■□□□ 1.67
HERC6-205ENST00000504905 ATP6V0A2Q9Y487 856 aa25.5■■□□□ 1.67
HERC6-205ENST00000504905 CAPN15O75808 1086 aa25.49■■□□□ 1.67
HERC6-205ENST00000504905 CCT4P50991 539 aaKnown RBP25.49■■□□□ 1.67
HERC6-205ENST00000504905 TMC4Q7Z404 712 aa25.49■■□□□ 1.67
HERC6-205ENST00000504905 TTLL11Q8NHH1 800 aa25.49■■□□□ 1.67
HERC6-205ENST00000504905 CELF1Q92879 486 aaKnown RBP25.49■■□□□ 1.67
HERC6-205ENST00000504905 SEC31BQ9NQW1 1179 aa25.49■■□□□ 1.67
HERC6-205ENST00000504905 GRIPAP1Q4V328 841 aa25.48■■□□□ 1.67
HERC6-205ENST00000504905 SP8Q8IXZ3 490 aa25.48■■□□□ 1.67
HERC6-205ENST00000504905 RPS8P62241 208 aaKnown RBP25.47■■□□□ 1.67
HERC6-205ENST00000504905 FKBP4Q02790 459 aaKnown RBP eCLIP25.47■■□□□ 1.67
HERC6-205ENST00000504905 COL4A1P02462 1669 aa25.47■■□□□ 1.67
HERC6-205ENST00000504905 RTL9Q8NET4 1388 aa25.46■■□□□ 1.67
HERC6-205ENST00000504905 ATF7IPQ6VMQ6 1270 aa25.46■■□□□ 1.67
HERC6-205ENST00000504905 SLC51AQ86UW1 340 aa25.46■■□□□ 1.67
HERC6-205ENST00000504905 GREM2Q9H772 168 aa25.46■■□□□ 1.67
HERC6-205ENST00000504905 LRRC37AA6NMS7 1700 aa25.46■■□□□ 1.67
HERC6-205ENST00000504905 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
HERC6-205ENST00000504905 UTYO14607 1347 aa25.45■■□□□ 1.66
HERC6-205ENST00000504905 SPEF2Q9C093 1822 aa25.45■■□□□ 1.66
HERC6-205ENST00000504905 NBPF7P0C2Y1 421 aaPredicted RBP25.45■■□□□ 1.66
HERC6-205ENST00000504905 ZKSCAN2Q63HK3 967 aa25.45■■□□□ 1.66
HERC6-205ENST00000504905 CHADLQ6NUI6 762 aa25.45■■□□□ 1.66
HERC6-205ENST00000504905 CDC5LQ99459 802 aaKnown RBP25.45■■□□□ 1.66
HERC6-205ENST00000504905 CSF1RP07333 972 aa25.44■■□□□ 1.66
HERC6-205ENST00000504905 TRIM27P14373 513 aa25.44■■□□□ 1.66
HERC6-205ENST00000504905 ANKRD18AQ8IVF6 992 aa25.44■■□□□ 1.66
HERC6-205ENST00000504905 PSMD1Q99460 953 aa25.44■■□□□ 1.66
HERC6-205ENST00000504905 CREBZFQ9NS37 354 aa25.44■■□□□ 1.66
HERC6-205ENST00000504905 FOXO4P98177 505 aa25.43■■□□□ 1.66
HERC6-205ENST00000504905 FAM161AQ3B820 660 aa25.43■■□□□ 1.66
HERC6-205ENST00000504905 CHMP3Q9Y3E7 222 aa25.43■■□□□ 1.66
HERC6-205ENST00000504905 SUCLG2Q96I99 432 aa25.42■■□□□ 1.66
HERC6-205ENST00000504905 USP44Q9H0E7 712 aa25.42■■□□□ 1.66
HERC6-205ENST00000504905 ZNF277Q9NRM2 450 aaPredicted RBP25.42■■□□□ 1.66
HERC6-205ENST00000504905 DDNO94850 711 aaPredicted RBP25.41■■□□□ 1.66
HERC6-205ENST00000504905 ITGA6P23229 1130 aa25.41■■□□□ 1.66
HERC6-205ENST00000504905 EPHA10Q5JZY3 1008 aa25.41■■□□□ 1.66
HERC6-205ENST00000504905 DPP8Q6V1X1 898 aaPredicted RBP25.41■■□□□ 1.66
HERC6-205ENST00000504905 MPNDQ8N594 471 aa25.41■■□□□ 1.66
HERC6-205ENST00000504905 INTS3Q68E01 1043 aaKnown RBP25.4■■□□□ 1.66
HERC6-205ENST00000504905 LMBR1LQ6UX01 489 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms