RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 OS9Q13438 667 aaPredicted RBP12.49□□□□□ -0.41
DDX41-203ENST00000504781 CCDC57Q2TAC2 916 aa12.49□□□□□ -0.41
DDX41-203ENST00000504781 SUSD4Q5VX71 490 aa12.49□□□□□ -0.41
DDX41-203ENST00000504781 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.41
DDX41-203ENST00000504781 TAF1LQ8IZX4 1826 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 AOX1Q06278 1338 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 APBB1O00213 710 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 IRS4O14654 1257 aaPredicted RBP12.48□□□□□ -0.41
DDX41-203ENST00000504781 CIAO1O76071 339 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 PDE1AP54750 535 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 SLC10A5Q5PT55 438 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 TTLL11Q8NHH1 800 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 NYXQ9GZU5 481 aa12.48□□□□□ -0.41
DDX41-203ENST00000504781 RBM19Q9Y4C8 960 aaKnown RBP12.48□□□□□ -0.41
DDX41-203ENST00000504781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.47□□□□□ -0.41
DDX41-203ENST00000504781 SASH1O94885 1247 aa12.47□□□□□ -0.41
DDX41-203ENST00000504781 SSFA2P28290 1259 aa12.47□□□□□ -0.41
DDX41-203ENST00000504781 IFIT5Q13325 482 aaKnown RBP12.47□□□□□ -0.41
DDX41-203ENST00000504781 C8orf34Q49A92 452 aa12.47□□□□□ -0.41
DDX41-203ENST00000504781 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
DDX41-203ENST00000504781 ZNF784Q8NCA9 323 aaPredicted RBP12.47□□□□□ -0.41
DDX41-203ENST00000504781 SETDB2Q96T68 719 aa12.47□□□□□ -0.41
DDX41-203ENST00000504781 ANKRD36CQ5JPF3 1778 aa12.47□□□□□ -0.41
DDX41-203ENST00000504781 UBN2Q6ZU65 1347 aa12.46□□□□□ -0.41
DDX41-203ENST00000504781 SALL3Q9BXA9 1300 aa12.46□□□□□ -0.41
DDX41-203ENST00000504781 IL15P40933 162 aaPredicted RBP12.46□□□□□ -0.41
DDX41-203ENST00000504781 TTC22Q5TAA0 569 aa12.46□□□□□ -0.41
DDX41-203ENST00000504781 USPL1Q5W0Q7 1092 aa12.46□□□□□ -0.41
DDX41-203ENST00000504781 TPTE2Q6XPS3 522 aa12.46□□□□□ -0.41
DDX41-203ENST00000504781 AMIGO3Q86WK7 504 aa12.46□□□□□ -0.41
DDX41-203ENST00000504781 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
DDX41-203ENST00000504781 GPR108Q9NPR9 543 aa12.46□□□□□ -0.41
DDX41-203ENST00000504781 PA2G4Q9UQ80 394 aaKnown RBP12.46□□□□□ -0.41
DDX41-203ENST00000504781 UTRNP46939 3433 aa12.45□□□□□ -0.42
DDX41-203ENST00000504781 TTC41PQ6P2S7 1318 aa12.45□□□□□ -0.42
DDX41-203ENST00000504781 ANKRD18BA2A2Z9 1011 aa12.45□□□□□ -0.42
DDX41-203ENST00000504781 NTSR2O95665 410 aa12.45□□□□□ -0.42
DDX41-203ENST00000504781 MX1P20591 662 aa12.45□□□□□ -0.42
DDX41-203ENST00000504781 CTSWP56202 376 aa12.45□□□□□ -0.42
DDX41-203ENST00000504781 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
DDX41-203ENST00000504781 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
DDX41-203ENST00000504781 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
DDX41-203ENST00000504781 USP42Q9H9J4 1324 aaKnown RBP12.44□□□□□ -0.42
DDX41-203ENST00000504781 EYA2O00167 538 aa12.44□□□□□ -0.42
DDX41-203ENST00000504781 ERC2O15083 957 aa12.44□□□□□ -0.42
DDX41-203ENST00000504781 IFIT2P09913 472 aaKnown RBP12.44□□□□□ -0.42
DDX41-203ENST00000504781 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
DDX41-203ENST00000504781 SYNE4Q8N205 404 aa12.44□□□□□ -0.42
DDX41-203ENST00000504781 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
DDX41-203ENST00000504781 WWC3Q9ULE0 1092 aa12.44□□□□□ -0.42
DDX41-203ENST00000504781 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
DDX41-203ENST00000504781 SF3B3Q15393 1217 aaKnown RBP12.43□□□□□ -0.42
DDX41-203ENST00000504781 CCDC152Q4G0S7 254 aa12.43□□□□□ -0.42
DDX41-203ENST00000504781 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
DDX41-203ENST00000504781 ATG9AQ7Z3C6 839 aa12.43□□□□□ -0.42
DDX41-203ENST00000504781 KLHDC4Q8TBB5 520 aa12.43□□□□□ -0.42
DDX41-203ENST00000504781 CEP126Q9P2H0 1117 aa12.43□□□□□ -0.42
DDX41-203ENST00000504781 AKAP2Q9Y2D5 859 aa12.43□□□□□ -0.42
DDX41-203ENST00000504781 GRIN3BO60391 1043 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 GLRX3O76003 335 aaKnown RBP12.42□□□□□ -0.42
DDX41-203ENST00000504781 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.423e-6■□□□□ 10.1
DDX41-203ENST00000504781 ITGA6P23229 1130 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 TM4SF1P30408 202 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 LDHAL6AQ6ZMR3 332 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 NUTM1Q86Y26 1132 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 OTUD7AQ8TE49 926 aaPredicted RBP12.42□□□□□ -0.42
DDX41-203ENST00000504781 EAF2Q96CJ1 260 aaPredicted RBP12.42□□□□□ -0.42
DDX41-203ENST00000504781 SIL1Q9H173 461 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 ECHDC1Q9NTX5 307 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 SRP68Q9UHB9 627 aaKnown RBP12.42□□□□□ -0.42
DDX41-203ENST00000504781 RIPOR2Q9Y4F9 1068 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 CD2APQ9Y5K6 639 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 RTL9Q8NET4 1388 aa12.42□□□□□ -0.42
DDX41-203ENST00000504781 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 HCLS1P14317 486 aaPredicted RBP12.41□□□□□ -0.42
DDX41-203ENST00000504781 SDSP20132 328 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 TFCP2Q12800 502 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 COL24A1Q17RW2 1714 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 AACSQ86V21 672 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 NLRP3Q96P20 1036 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 GREM2Q9H772 168 aa12.41□□□□□ -0.42
DDX41-203ENST00000504781 UPF2Q9HAU5 1272 aaKnown RBP12.41□□□□□ -0.42
DDX41-203ENST00000504781 CDC45O75419 566 aa12.4□□□□□ -0.42
DDX41-203ENST00000504781 GSPT1P15170 499 aaKnown RBP12.4□□□□□ -0.42
DDX41-203ENST00000504781 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
DDX41-203ENST00000504781 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
DDX41-203ENST00000504781 NBPF5PQ86XG9 351 aaPredicted RBP12.4□□□□□ -0.42
DDX41-203ENST00000504781 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
DDX41-203ENST00000504781 MYH3P11055 1940 aa12.4□□□□□ -0.42
DDX41-203ENST00000504781 CHD4Q14839 1912 aa12.4□□□□□ -0.42
DDX41-203ENST00000504781 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
DDX41-203ENST00000504781 GYS1P13807 737 aa12.39□□□□□ -0.43
DDX41-203ENST00000504781 NFIXQ14938 502 aa12.39□□□□□ -0.43
DDX41-203ENST00000504781 LRRC24Q50LG9 513 aa12.39□□□□□ -0.43
DDX41-203ENST00000504781 BICDL1Q6ZP65 573 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms