RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 FPGT-TNNI3KV9GXZ4 949 aa16.25■□□□□ 0.19
LMNA-220ENST00000504687 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
LMNA-220ENST00000504687 SPEF2Q9C093 1822 aa16.24■□□□□ 0.19
LMNA-220ENST00000504687 REC8O95072 547 aa16.24■□□□□ 0.19
LMNA-220ENST00000504687 ADRA2BP18089 450 aa16.24■□□□□ 0.19
LMNA-220ENST00000504687 GPTP24298 496 aa16.24■□□□□ 0.19
LMNA-220ENST00000504687 CNTROBQ8N137 903 aa16.24■□□□□ 0.19
LMNA-220ENST00000504687 KLHDC4Q8TBB5 520 aa16.24■□□□□ 0.19
LMNA-220ENST00000504687 UTP14AQ9BVJ6 771 aaKnown RBP16.24■□□□□ 0.19
LMNA-220ENST00000504687 NTSR2O95665 410 aa16.23■□□□□ 0.19
LMNA-220ENST00000504687 CHMLP26374 656 aa16.23■□□□□ 0.19
LMNA-220ENST00000504687 IFIT5Q13325 482 aaKnown RBP16.23■□□□□ 0.19
LMNA-220ENST00000504687 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
LMNA-220ENST00000504687 IL27Q8NEV9 243 aa16.23■□□□□ 0.19
LMNA-220ENST00000504687 ARXQ96QS3 562 aa16.23■□□□□ 0.19
LMNA-220ENST00000504687 SIL1Q9H173 461 aa16.23■□□□□ 0.19
LMNA-220ENST00000504687 RFX7Q2KHR2 1363 aa16.23■□□□□ 0.19
LMNA-220ENST00000504687 ZNF609O15014 1411 aa16.22■□□□□ 0.19
LMNA-220ENST00000504687 MSH5O43196 834 aa16.22■□□□□ 0.19
LMNA-220ENST00000504687 ATP5JP18859 108 aa16.22■□□□□ 0.19
LMNA-220ENST00000504687 TFCP2Q12800 502 aa16.22■□□□□ 0.19
LMNA-220ENST00000504687 RTCBQ9Y3I0 505 aaKnown RBP16.22■□□□□ 0.19
LMNA-220ENST00000504687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.22■□□□□ 0.19
LMNA-220ENST00000504687 CASZ1Q86V15 1759 aa16.22■□□□□ 0.19
LMNA-220ENST00000504687 SLC10A5Q5PT55 438 aa16.21■□□□□ 0.19
LMNA-220ENST00000504687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.21■□□□□ 0.19
LMNA-220ENST00000504687 EVI5LQ96CN4 794 aa16.21■□□□□ 0.19
LMNA-220ENST00000504687 IL17RAQ96F46 866 aa16.21■□□□□ 0.19
LMNA-220ENST00000504687 ESYT1Q9BSJ8 1104 aa16.21■□□□□ 0.19
LMNA-220ENST00000504687 USP26Q9BXU7 913 aa16.21■□□□□ 0.19
LMNA-220ENST00000504687 NIP7Q9Y221 180 aaKnown RBP eCLIP16.21■□□□□ 0.19
LMNA-220ENST00000504687 ARAP2Q8WZ64 1704 aa16.21■□□□□ 0.19
LMNA-220ENST00000504687 ABCC12Q96J65 1359 aa16.21■□□□□ 0.19
LMNA-220ENST00000504687 ANKRD18BA2A2Z9 1011 aa16.2■□□□□ 0.18
LMNA-220ENST00000504687 TRIM6-TRIM34B2RNG4 842 aa16.2■□□□□ 0.18
LMNA-220ENST00000504687 RTL5Q5HYW3 569 aaPredicted RBP16.2■□□□□ 0.18
LMNA-220ENST00000504687 TSHZ3Q63HK5 1081 aa16.2■□□□□ 0.18
LMNA-220ENST00000504687 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
LMNA-220ENST00000504687 AKAP2Q9Y2D5 859 aa16.2■□□□□ 0.18
LMNA-220ENST00000504687 CHMP3Q9Y3E7 222 aa16.2■□□□□ 0.18
LMNA-220ENST00000504687 RIPOR2Q9Y4F9 1068 aa16.2■□□□□ 0.18
LMNA-220ENST00000504687 HIP1O00291 1037 aa16.19■□□□□ 0.18
LMNA-220ENST00000504687 PLSCR1O15162 318 aa16.19■□□□□ 0.18
LMNA-220ENST00000504687 NYXQ9GZU5 481 aa16.19■□□□□ 0.18
LMNA-220ENST00000504687 SNRKQ9NRH2 765 aa16.19■□□□□ 0.18
LMNA-220ENST00000504687 DBNLQ9UJU6 430 aaKnown RBP16.19■□□□□ 0.18
LMNA-220ENST00000504687 RIC1Q4ADV7 1423 aa16.19■□□□□ 0.18
LMNA-220ENST00000504687 GNPATO15228 680 aa16.18■□□□□ 0.18
LMNA-220ENST00000504687 ITGA6P23229 1130 aa16.18■□□□□ 0.18
LMNA-220ENST00000504687 BECN1Q14457 450 aa16.18■□□□□ 0.18
LMNA-220ENST00000504687 LRRC24Q50LG9 513 aa16.18■□□□□ 0.18
LMNA-220ENST00000504687 SYNE4Q8N205 404 aa16.18■□□□□ 0.18
LMNA-220ENST00000504687 RILPL2Q969X0 211 aa16.18■□□□□ 0.18
LMNA-220ENST00000504687 CCDC8Q9H0W5 538 aaPredicted RBP16.18■□□□□ 0.18
LMNA-220ENST00000504687 GREM2Q9H772 168 aa16.18■□□□□ 0.18
LMNA-220ENST00000504687 CEP126Q9P2H0 1117 aa16.18■□□□□ 0.18
LMNA-220ENST00000504687 TNS1Q9HBL0 1735 aaKnown RBP16.17■□□□□ 0.18
LMNA-220ENST00000504687 SF3B3Q15393 1217 aaKnown RBP16.17■□□□□ 0.18
LMNA-220ENST00000504687 CCDC152Q4G0S7 254 aa16.17■□□□□ 0.18
LMNA-220ENST00000504687 SNX21Q969T3 373 aa16.17■□□□□ 0.18
LMNA-220ENST00000504687 KIF2CQ99661 725 aa16.17■□□□□ 0.18
LMNA-220ENST00000504687 LRRC4BQ9NT99 713 aa16.17■□□□□ 0.18
LMNA-220ENST00000504687 SGSM2O43147 1006 aa16.16■□□□□ 0.18
LMNA-220ENST00000504687 ZPR1O75312 459 aa16.16■□□□□ 0.18
LMNA-220ENST00000504687 SSFA2P28290 1259 aa16.16■□□□□ 0.18
LMNA-220ENST00000504687 VGLL2Q8N8G2 317 aa16.16■□□□□ 0.18
LMNA-220ENST00000504687 RUFY2Q8WXA3 655 aa16.16■□□□□ 0.18
LMNA-220ENST00000504687 ARHGEF1Q92888 912 aaKnown RBP16.16■□□□□ 0.18
LMNA-220ENST00000504687 ZNF594Q96JF6 807 aaPredicted RBP16.16■□□□□ 0.18
LMNA-220ENST00000504687 ZNF512BQ96KM6 892 aaPredicted RBP16.16■□□□□ 0.18
LMNA-220ENST00000504687 TLR7Q9NYK1 1049 aaKnown RBP16.16■□□□□ 0.18
LMNA-220ENST00000504687 MROH5Q6ZUA9 1318 aa16.16■□□□□ 0.18
LMNA-220ENST00000504687 RAD50Q92878 1312 aa16.16■□□□□ 0.18
LMNA-220ENST00000504687 ANAPC15P60006 121 aa16.15■□□□□ 0.18
LMNA-220ENST00000504687 TAF7LQ5H9L4 462 aa16.15■□□□□ 0.18
LMNA-220ENST00000504687 TRAPPC3LQ5T215 181 aa16.15■□□□□ 0.18
LMNA-220ENST00000504687 USPL1Q5W0Q7 1092 aa16.15■□□□□ 0.18
LMNA-220ENST00000504687 LDHAL6AQ6ZMR3 332 aa16.15■□□□□ 0.18
LMNA-220ENST00000504687 HAUS7Q99871 368 aa16.15■□□□□ 0.18
LMNA-220ENST00000504687 DBNDD2Q9BQY9 259 aa16.15■□□□□ 0.18
LMNA-220ENST00000504687 PUS3Q9BZE2 481 aaKnown RBP16.15■□□□□ 0.18
LMNA-220ENST00000504687 BCL11AQ9H165 835 aa16.15■□□□□ 0.18
LMNA-220ENST00000504687 A0A1B0GUL6 1792 aa16.15■□□□□ 0.18
LMNA-220ENST00000504687 A0A1B0GUL7 405 aa16.14■□□□□ 0.17
LMNA-220ENST00000504687 KCNQ4P56696 695 aa16.14■□□□□ 0.17
LMNA-220ENST00000504687 TBC1D9BQ66K14 1250 aa16.14■□□□□ 0.17
LMNA-220ENST00000504687 SETDB2Q96T68 719 aa16.14■□□□□ 0.17
LMNA-220ENST00000504687 TRIM37O94972 964 aa16.13■□□□□ 0.17
LMNA-220ENST00000504687 UPF1Q92900 1129 aaKnown RBP eCLIP16.13■□□□□ 0.17
LMNA-220ENST00000504687 PDE8BO95263 885 aa16.12■□□□□ 0.17
LMNA-220ENST00000504687 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
LMNA-220ENST00000504687 RFC4P35249 363 aa16.12■□□□□ 0.17
LMNA-220ENST00000504687 RABEP1Q15276 862 aa16.12■□□□□ 0.17
LMNA-220ENST00000504687 CARMIL3Q8ND23 1372 aa16.12■□□□□ 0.17
LMNA-220ENST00000504687 ZBTB22O15209 634 aa16.11■□□□□ 0.17
LMNA-220ENST00000504687 FGFR2P21802 821 aa16.11■□□□□ 0.17
LMNA-220ENST00000504687 TXNRD1Q16881 649 aa16.11■□□□□ 0.17
LMNA-220ENST00000504687 TPTE2Q6XPS3 522 aa16.11■□□□□ 0.17
LMNA-220ENST00000504687 CDC5LQ99459 802 aaKnown RBP16.11■□□□□ 0.17
LMNA-220ENST00000504687 BOLA2Q9H3K6 86 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms