RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 BBOX1O75936 387 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 IGKV5-2P06315 115 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 VEGFAP15692 232 aaPredicted RBP18.22■□□□□ 0.51
HOXC9-202ENST00000504557 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 JDP2Q8WYK2 163 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
HOXC9-202ENST00000504557 SNED1Q8TER0 1413 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 COL4A5P29400 1685 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
HOXC9-202ENST00000504557 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
HOXC9-202ENST00000504557 AOC3Q16853 763 aa18.21■□□□□ 0.51
HOXC9-202ENST00000504557 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
HOXC9-202ENST00000504557 DPP8Q6V1X1 898 aaPredicted RBP18.21■□□□□ 0.51
HOXC9-202ENST00000504557 ZNF521Q96K83 1311 aa18.21■□□□□ 0.51
HOXC9-202ENST00000504557 F6X3S4 739 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 SF3B3Q15393 1217 aaKnown RBP18.2■□□□□ 0.5
HOXC9-202ENST00000504557 SP8Q8IXZ3 490 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 MPNDQ8N594 471 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 GJA3Q9Y6H8 435 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 LRRC37AA6NMS7 1700 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 NEURL1BA8MQ27 555 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 PDE8AO60658 829 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 HSPA6P17066 643 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 UBE3BQ7Z3V4 1068 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 RBM46Q8TBY0 533 aaKnown RBP18.19■□□□□ 0.5
HOXC9-202ENST00000504557 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 POTECB2RU33 542 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 HSP90B1P14625 803 aaKnown RBP18.18■□□□□ 0.5
HOXC9-202ENST00000504557 CCDC152Q4G0S7 254 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 GRIPAP1Q4V328 841 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 NIM1KQ8IY84 436 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 MIER1Q8N108 512 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 SCN4AP35499 1836 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 EIF6P56537 245 aaKnown RBP18.17■□□□□ 0.5
HOXC9-202ENST00000504557 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
HOXC9-202ENST00000504557 E9PSI1 815 aa18.16■□□□□ 0.5
HOXC9-202ENST00000504557 FZD9O00144 591 aa18.16■□□□□ 0.5
HOXC9-202ENST00000504557 RPS8P62241 208 aaKnown RBP18.16■□□□□ 0.5
HOXC9-202ENST00000504557 SLC4A10Q6U841 1118 aa18.16■□□□□ 0.5
HOXC9-202ENST00000504557 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
HOXC9-202ENST00000504557 C6orf229H3BNL8 230 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 RIMBP2O15034 1052 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 CTSWP56202 376 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 GPSM2P81274 684 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 GCKRQ14397 625 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 EAPPQ56P03 285 aaPredicted RBP18.15■□□□□ 0.5
HOXC9-202ENST00000504557 SMC1BQ8NDV3 1235 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 BCL2L13Q9BXK5 485 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 CDHR2Q9BYE9 1310 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 DUOX1Q9NRD9 1551 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 POTEIP0CG38 1075 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 POTEJP0CG39 1038 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 SLFN5Q08AF3 891 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 TMC4Q7Z404 712 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 GPR101Q96P66 508 aaPredicted RBP18.14■□□□□ 0.49
HOXC9-202ENST00000504557 IQCA1LA6NCM1 817 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 HTRA3P83110 453 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 ANKRD18AQ8IVF6 992 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 LINS1Q8NG48 757 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 ANKIB1Q9P2G1 1089 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 H7C1W4 665 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 FSTL1Q12841 308 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 GPC2Q8N158 579 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 RTFDC1Q9BY42 306 aaPredicted RBP18.12■□□□□ 0.49
HOXC9-202ENST00000504557 GREM2Q9H772 168 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 HACL1Q9UJ83 578 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 CLEC11AQ9Y240 323 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 TTLL11Q8NHH1 800 aa18.11■□□□□ 0.49
HOXC9-202ENST00000504557 L3MBTL3Q96JM7 780 aaPredicted RBP18.11■□□□□ 0.49
HOXC9-202ENST00000504557 TAF1DQ9H5J8 278 aaPredicted RBP18.11■□□□□ 0.49
HOXC9-202ENST00000504557 POLLQ9UGP5 575 aa18.11■□□□□ 0.49
HOXC9-202ENST00000504557 CHMP3Q9Y3E7 222 aa18.11■□□□□ 0.49
HOXC9-202ENST00000504557 LTBP1Q14766 1721 aa18.11■□□□□ 0.49
HOXC9-202ENST00000504557 RAD17O75943 681 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 LMOD1P29536 600 aaPredicted RBP18.1■□□□□ 0.49
HOXC9-202ENST00000504557 APLP1P51693 650 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 KIAA2012Q0VF49 1180 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 WASHC4Q2M389 1173 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 CDC5LQ99459 802 aaKnown RBP18.1■□□□□ 0.49
HOXC9-202ENST00000504557 DBNDD1Q9H9R9 158 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 ZNRF3Q9ULT6 936 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 UFL1O94874 794 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 EPHX2P34913 555 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 DOK7Q18PE1 504 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 MRPL50Q8N5N7 158 aaKnown RBP18.09■□□□□ 0.49
HOXC9-202ENST00000504557 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 G3V3G9 751 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 CXCL9Q07325 125 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 DCAF8Q5TAQ9 597 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 TBC1D16Q8TBP0 767 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 VPS33BQ9H267 617 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 C9orf78Q9NZ63 289 aaPredicted RBP18.08■□□□□ 0.48
HOXC9-202ENST00000504557 EPS15P42566 896 aa18.07■□□□□ 0.48
HOXC9-202ENST00000504557 CASP7P55210 303 aa18.07■□□□□ 0.48
HOXC9-202ENST00000504557 CIAPIN1Q6FI81 312 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms