RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CEP126Q9P2H0 1117 aa11.8□□□□□ -0.52
COL1A1-210ENST00000504289 PALD1Q9ULE6 856 aa11.8□□□□□ -0.52
COL1A1-210ENST00000504289 RREB1Q92766 1687 aa11.8□□□□□ -0.52
COL1A1-210ENST00000504289 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 ANKRD36CQ5JPF3 1778 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 MAP4K4O95819 1239 aaPredicted RBP11.79□□□□□ -0.52
COL1A1-210ENST00000504289 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
COL1A1-210ENST00000504289 KRT32Q14532 448 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 VPS72Q15906 364 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 PARP10Q53GL7 1025 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 VPS53Q5VIR6 699 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 USPL1Q5W0Q7 1092 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 KLHDC4Q8TBB5 520 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 TTC14Q96N46 770 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 BOLA2Q9H3K6 86 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 ZSWIM6Q9HCJ5 1215 aa11.79□□□□□ -0.52
COL1A1-210ENST00000504289 TLR7Q9NYK1 1049 aaKnown RBP11.79□□□□□ -0.52
COL1A1-210ENST00000504289 ZNF609O15014 1411 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 DOT1LQ8TEK3 1739 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 ADAMTS2O95450 1211 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 NMIQ13287 307 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-210ENST00000504289 IFIT5Q13325 482 aaKnown RBP11.78□□□□□ -0.52
COL1A1-210ENST00000504289 ANKRD1Q15327 319 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 ZNF34Q8IZ26 560 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 KBTBD3Q8NAB2 608 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 ZNF512BQ96KM6 892 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-210ENST00000504289 IL25Q9H293 177 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 SH2B1Q9NRF2 756 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-210ENST00000504289 HELLSQ9NRZ9 838 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 CCDC87Q9NVE4 849 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 LIMCH1Q9UPQ0 1083 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 CHMP3Q9Y3E7 222 aa11.78□□□□□ -0.52
COL1A1-210ENST00000504289 TRAK2O60296 914 aa11.77□□□□□ -0.53
COL1A1-210ENST00000504289 PDE8AO60658 829 aa11.77□□□□□ -0.53
COL1A1-210ENST00000504289 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.53
COL1A1-210ENST00000504289 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-210ENST00000504289 DBNDD2Q9BQY9 259 aa11.77□□□□□ -0.53
COL1A1-210ENST00000504289 CYP46A1Q9Y6A2 500 aa11.77□□□□□ -0.53
COL1A1-210ENST00000504289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-210ENST00000504289 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-210ENST00000504289 SPATA31A6Q5VVP1 1343 aa11.77□□□□□ -0.53
COL1A1-210ENST00000504289 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.53
COL1A1-210ENST00000504289 LOC102724428A0A0B4J2F2 783 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 ZFYP08048 801 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-210ENST00000504289 CTSWP56202 376 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 SIK1P57059 783 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 MCMDC2Q4G0Z9 681 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 CCDC158Q5M9N0 1113 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
COL1A1-210ENST00000504289 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 FNBP4Q8N3X1 1017 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-210ENST00000504289 TTLL11Q8NHH1 800 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 JARID2Q92833 1246 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-210ENST00000504289 SYTL4Q96C24 671 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-210ENST00000504289 ZBTB1Q9Y2K1 713 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-210ENST00000504289 RBM8AQ9Y5S9 174 aaKnown RBP11.76□□□□□ -0.53
COL1A1-210ENST00000504289 NUP98P52948 1817 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
COL1A1-210ENST00000504289 A0A1B0GUL7 405 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 ANKRD18BA2A2Z9 1011 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 TAF5LO75529 589 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 BAG4O95429 457 aaKnown RBP11.75□□□□□ -0.53
COL1A1-210ENST00000504289 SSFA2P28290 1259 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 KCNJ4P48050 445 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 PTH1RQ03431 593 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 TAF7LQ5H9L4 462 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 INTS5Q6P9B9 1019 aaKnown RBP11.75□□□□□ -0.53
COL1A1-210ENST00000504289 POTEAQ6S8J7 498 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 RASEFQ8IZ41 740 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 FAM89AQ96GI7 184 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 PAG1Q9NWQ8 432 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 ZNF652Q9Y2D9 606 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 RPAP1Q9BWH6 1393 aaPredicted RBP11.75□□□□□ -0.53
COL1A1-210ENST00000504289 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
COL1A1-210ENST00000504289 MYH3P11055 1940 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 A0A0D9SFI3 127 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 IRS4O14654 1257 aaPredicted RBP11.74□□□□□ -0.53
COL1A1-210ENST00000504289 SLC27A2O14975 620 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 BRD1O95696 1058 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
COL1A1-210ENST00000504289 ATP6V1AP38606 617 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 HLFQ16534 295 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 PRPF40BQ6NWY9 871 aaKnown RBP11.74□□□□□ -0.53
COL1A1-210ENST00000504289 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 CHMP4CQ96CF2 233 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 FAM227BQ96M60 508 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 NEUROD6Q96NK8 337 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 DSCC1Q9BVC3 393 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 PDRG1Q9NUG6 133 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 TRMT112Q9UI30 125 aaKnown RBP11.74□□□□□ -0.53
COL1A1-210ENST00000504289 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
COL1A1-210ENST00000504289 RIPOR2Q9Y4F9 1068 aa11.74□□□□□ -0.53
COL1A1-210ENST00000504289 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.74□□□□□ -0.53
COL1A1-210ENST00000504289 IFIT1P09914 478 aaKnown RBP11.73□□□□□ -0.53
COL1A1-210ENST00000504289 CASTP20810 708 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms