RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 DDX58O95786 925 aaKnown RBP28.41■■■□□ 2.14
LSM6-203ENST00000503982 EPHX2P34913 555 aa28.41■■■□□ 2.14
LSM6-203ENST00000503982 SP8Q8IXZ3 490 aa28.41■■■□□ 2.14
LSM6-203ENST00000503982 STK31Q9BXU1 1019 aa28.4■■■□□ 2.14
LSM6-203ENST00000503982 COL4A5P29400 1685 aa28.39■■■□□ 2.14
LSM6-203ENST00000503982 IRS4O14654 1257 aaPredicted RBP28.39■■■□□ 2.14
LSM6-203ENST00000503982 TSPYL6Q8N831 410 aa28.39■■■□□ 2.14
LSM6-203ENST00000503982 WWC1Q8IX03 1113 aa28.38■■■□□ 2.13
LSM6-203ENST00000503982 CCDC27Q2M243 656 aa28.37■■■□□ 2.13
LSM6-203ENST00000503982 PNMA8AQ86V59 439 aaPredicted RBP28.37■■■□□ 2.13
LSM6-203ENST00000503982 TMC4Q7Z404 712 aa28.36■■■□□ 2.13
LSM6-203ENST00000503982 HSP90B1P14625 803 aaKnown RBP28.35■■■□□ 2.13
LSM6-203ENST00000503982 TRIM28Q13263 835 aaKnown RBP28.35■■■□□ 2.13
LSM6-203ENST00000503982 VPS33BQ9H267 617 aa28.35■■■□□ 2.13
LSM6-203ENST00000503982 SF3B3Q15393 1217 aaKnown RBP28.34■■■□□ 2.13
LSM6-203ENST00000503982 TWISTNBQ3B726 338 aaPredicted RBP28.34■■■□□ 2.13
LSM6-203ENST00000503982 ZBTB38Q8NAP3 1195 aaPredicted RBP28.34■■■□□ 2.13
LSM6-203ENST00000503982 CWC25Q9NXE8 425 aaPredicted RBP28.34■■■□□ 2.13
LSM6-203ENST00000503982 CCDC191Q8NCU4 936 aa28.32■■■□□ 2.12
LSM6-203ENST00000503982 JARID2Q92833 1246 aaPredicted RBP28.32■■■□□ 2.12
LSM6-203ENST00000503982 CELF1Q92879 486 aaKnown RBP28.32■■■□□ 2.12
LSM6-203ENST00000503982 METTL22Q9BUU2 404 aaPredicted RBP28.32■■■□□ 2.12
LSM6-203ENST00000503982 RTFDC1Q9BY42 306 aaPredicted RBP28.32■■■□□ 2.12
LSM6-203ENST00000503982 ZNRF3Q9ULT6 936 aa28.32■■■□□ 2.12
LSM6-203ENST00000503982 NSFL1CQ9UNZ2 370 aaKnown RBP28.32■■■□□ 2.12
LSM6-203ENST00000503982 MAP3K2Q9Y2U5 619 aa28.32■■■□□ 2.12
LSM6-203ENST00000503982 FAM9BQ8IZU0 186 aa28.31■■■□□ 2.12
LSM6-203ENST00000503982 LRRC37AA6NMS7 1700 aa28.3■■■□□ 2.12
LSM6-203ENST00000503982 IL16Q14005 1332 aa28.3■■■□□ 2.12
LSM6-203ENST00000503982 NEXNQ0ZGT2 675 aa28.3■■■□□ 2.12
LSM6-203ENST00000503982 MAP1SQ66K74 1059 aaPredicted RBP28.3■■■□□ 2.12
LSM6-203ENST00000503982 CREBZFQ9NS37 354 aa28.3■■■□□ 2.12
LSM6-203ENST00000503982 C6orf229H3BNL8 230 aa28.29■■■□□ 2.12
LSM6-203ENST00000503982 PCCAP05165 728 aaPredicted RBP28.29■■■□□ 2.12
LSM6-203ENST00000503982 EPS15P42566 896 aa28.29■■■□□ 2.12
LSM6-203ENST00000503982 KIAA2012Q0VF49 1180 aa28.29■■■□□ 2.12
LSM6-203ENST00000503982 JMYQ8N9B5 988 aa28.29■■■□□ 2.12
LSM6-203ENST00000503982 CCDC85AQ96PX6 553 aaPredicted RBP28.29■■■□□ 2.12
LSM6-203ENST00000503982 MKRN1Q9UHC7 482 aaKnown RBP28.29■■■□□ 2.12
LSM6-203ENST00000503982 LTBP1Q14766 1721 aa28.29■■■□□ 2.12
LSM6-203ENST00000503982 PI4KAP2A4QPH2 592 aa28.28■■■□□ 2.12
LSM6-203ENST00000503982 KSR2Q6VAB6 950 aa28.28■■■□□ 2.12
LSM6-203ENST00000503982 PI4KAP1Q8N8J0 262 aa28.28■■■□□ 2.12
LSM6-203ENST00000503982 BCL2L13Q9BXK5 485 aa28.28■■■□□ 2.12
LSM6-203ENST00000503982 ADAMTSL1Q8N6G6 1762 aa28.28■■■□□ 2.12
LSM6-203ENST00000503982 RIMBP2O15034 1052 aa28.27■■■□□ 2.12
LSM6-203ENST00000503982 SLC4A2P04920 1241 aa28.27■■■□□ 2.12
LSM6-203ENST00000503982 SCNN1DP51172 638 aa28.27■■■□□ 2.12
LSM6-203ENST00000503982 CXCL9Q07325 125 aa28.27■■■□□ 2.12
LSM6-203ENST00000503982 CCDC152Q4G0S7 254 aa28.27■■■□□ 2.12
LSM6-203ENST00000503982 CIAPIN1Q6FI81 312 aa28.27■■■□□ 2.12
LSM6-203ENST00000503982 CNTROBQ8N137 903 aa28.27■■■□□ 2.12
LSM6-203ENST00000503982 PDE8AO60658 829 aa28.26■■■□□ 2.11
LSM6-203ENST00000503982 RAD17O75943 681 aa28.26■■■□□ 2.11
LSM6-203ENST00000503982 RPS8P62241 208 aaKnown RBP28.26■■■□□ 2.11
LSM6-203ENST00000503982 TNIP1Q15025 636 aa28.26■■■□□ 2.11
LSM6-203ENST00000503982 WASHC4Q2M389 1173 aa28.26■■■□□ 2.11
LSM6-203ENST00000503982 PASKQ96RG2 1323 aa28.25■■■□□ 2.11
LSM6-203ENST00000503982 FANCIQ9NVI1 1328 aa28.25■■■□□ 2.11
LSM6-203ENST00000503982 SEC31BQ9NQW1 1179 aa28.25■■■□□ 2.11
LSM6-203ENST00000503982 MYH3P11055 1940 aa28.24■■■□□ 2.11
LSM6-203ENST00000503982 TMEM88BA6NKF7 163 aa28.24■■■□□ 2.11
LSM6-203ENST00000503982 GPSM2P81274 684 aa28.24■■■□□ 2.11
LSM6-203ENST00000503982 NCBP3Q53F19 620 aaKnown RBP28.24■■■□□ 2.11
LSM6-203ENST00000503982 EYA3Q99504 573 aa28.24■■■□□ 2.11
LSM6-203ENST00000503982 CACNA1FO60840 1977 aa28.24■■■□□ 2.11
LSM6-203ENST00000503982 DUOX1Q9NRD9 1551 aa28.24■■■□□ 2.11
LSM6-203ENST00000503982 G3V3G9 751 aa28.23■■■□□ 2.11
LSM6-203ENST00000503982 GMPSP49915 693 aaPredicted RBP28.23■■■□□ 2.11
LSM6-203ENST00000503982 DCAF8Q5TAQ9 597 aa28.23■■■□□ 2.11
LSM6-203ENST00000503982 USP50Q70EL3 339 aaPredicted RBP28.23■■■□□ 2.11
LSM6-203ENST00000503982 G2E3Q7L622 706 aa28.23■■■□□ 2.11
LSM6-203ENST00000503982 WDR63Q8IWG1 891 aa28.23■■■□□ 2.11
LSM6-203ENST00000503982 COL4A1P02462 1669 aa28.23■■■□□ 2.11
LSM6-203ENST00000503982 ITGBL1O95965 494 aaPredicted RBP28.22■■■□□ 2.11
LSM6-203ENST00000503982 DBNDD1Q9H9R9 158 aa28.22■■■□□ 2.11
LSM6-203ENST00000503982 ADARB2Q9NS39 739 aaKnown RBP28.22■■■□□ 2.11
LSM6-203ENST00000503982 GPRC5DQ9NZD1 345 aa28.22■■■□□ 2.11
LSM6-203ENST00000503982 ANKIB1Q9P2G1 1089 aa28.22■■■□□ 2.11
LSM6-203ENST00000503982 SPEF2Q9C093 1822 aa28.21■■■□□ 2.11
LSM6-203ENST00000503982 FKBP5Q13451 457 aaPredicted RBP28.21■■■□□ 2.11
LSM6-203ENST00000503982 EXOSC9Q06265 439 aaKnown RBP28.2■■■□□ 2.1
LSM6-203ENST00000503982 CWF19L2Q2TBE0 894 aaKnown RBP28.2■■■□□ 2.1
LSM6-203ENST00000503982 ANKRD18AQ8IVF6 992 aa28.2■■■□□ 2.1
LSM6-203ENST00000503982 POLLQ9UGP5 575 aa28.2■■■□□ 2.1
LSM6-203ENST00000503982 IGKV5-2P06315 115 aa28.19■■■□□ 2.1
LSM6-203ENST00000503982 FLIIQ13045 1269 aa28.19■■■□□ 2.1
LSM6-203ENST00000503982 GPR101Q96P66 508 aaPredicted RBP28.19■■■□□ 2.1
LSM6-203ENST00000503982 CDHR2Q9BYE9 1310 aa28.18■■■□□ 2.1
LSM6-203ENST00000503982 UFL1O94874 794 aa28.18■■■□□ 2.1
LSM6-203ENST00000503982 HSPA1AP0DMV8 641 aaKnown RBP28.18■■■□□ 2.1
LSM6-203ENST00000503982 HSPA1BP0DMV9 641 aaKnown RBP28.18■■■□□ 2.1
LSM6-203ENST00000503982 DOK7Q18PE1 504 aa28.18■■■□□ 2.1
LSM6-203ENST00000503982 ZC3H12CQ9C0D7 883 aaKnown RBP28.18■■■□□ 2.1
LSM6-203ENST00000503982 ABT1Q9ULW3 272 aaKnown RBP28.18■■■□□ 2.1
LSM6-203ENST00000503982 YDJCA8MPS7 323 aa28.17■■■□□ 2.1
LSM6-203ENST00000503982 IFFO2Q5TF58 517 aa28.17■■■□□ 2.1
LSM6-203ENST00000503982 TBC1D16Q8TBP0 767 aa28.17■■■□□ 2.1
LSM6-203ENST00000503982 GGA1Q9UJY5 639 aa28.17■■■□□ 2.1
LSM6-203ENST00000503982 TRPM7Q96QT4 1865 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms