RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 C3orf67Q6ZVT6 689 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 FRAT1Q92837 279 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 TBC1D32Q96NH3 1257 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 LETM1O95202 739 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 EFEMP2O95967 443 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 RBM10P98175 930 aaKnown RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 GBP4Q96PP9 640 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 SLAIN2Q9P270 581 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 BAZ2AQ9UIF9 1905 aaKnown RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 ARID2Q68CP9 1835 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 ZBTB48P10074 688 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 POU5F1Q01860 360 aaKnown RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 ATF7IPQ6VMQ6 1270 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 SMARCC2Q8TAQ2 1214 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 FAM89AQ96GI7 184 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 ATP6V1AP38606 617 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 GNAI1P63096 354 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 MVPQ14764 893 aaKnown RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 NBPF6Q5VWK0 638 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 SGMS1Q86VZ5 419 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 SAMD3Q8N6K7 520 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 TMC1Q8TDI8 760 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 NBPF4Q96M43 638 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 INSM2Q96T92 566 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 CHMP5Q9NZZ3 219 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 PDCD11Q14690 1871 aaKnown RBP3.44□□□□□ -1.86
NEDD4-204ENST00000503468 TSC2P49815 1807 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 RLBP1P12271 317 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 ZNF662Q6ZS27 426 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 PCP11498 1178 aaKnown RBP3.44□□□□□ -1.86
NEDD4-204ENST00000503468 HOXD8P13378 290 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-204ENST00000503468 MAP3K11Q16584 847 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 LRRC10BA6NIK2 292 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 CT47A1Q5JQC4 288 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-204ENST00000503468 TMC4Q7Z404 712 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 RALGAPA2Q2PPJ7 1873 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 CAPN2P17655 700 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 ADD1P35611 737 aaKnown RBP3.44□□□□□ -1.86
NEDD4-204ENST00000503468 EMC10Q5UCC4 262 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 CTR9Q6PD62 1173 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 GIGYF2Q6Y7W6 1299 aaKnown RBP3.44□□□□□ -1.86
NEDD4-204ENST00000503468 GINM1Q9NU53 330 aa3.44□□□□□ -1.86
NEDD4-204ENST00000503468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.44□□□□□ -1.86
NEDD4-204ENST00000503468 OFD1O75665 1012 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 ARID4AP29374 1257 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-204ENST00000503468 LBX2Q6XYB7 198 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 TNFRSF25Q93038 417 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 GCC1Q96CN9 775 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 RCAN3Q9UKA8 241 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 MYPNQ86TC9 1320 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 CCDC173Q0VFZ6 552 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 ORC2Q13416 577 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-204ENST00000503468 TXNDC2Q86VQ3 553 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 CDC45O75419 566 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 MTHFSP49914 203 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 SLC20A2Q08357 652 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 NECTIN1Q15223 517 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 NT5DC1Q5TFE4 455 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 LIMS2Q7Z4I7 341 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 P3H3Q8IVL6 736 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 GAS2L2Q8NHY3 880 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 DOCK1Q14185 1865 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 XDHP47989 1333 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 EDIL3O43854 480 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 TRIM27P14373 513 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 CCDC125Q86Z20 511 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 PCDHB15Q9Y5E8 787 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 SEMA3EO15041 775 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 ZNF384Q8TF68 577 aa3.43□□□□□ -1.86
NEDD4-204ENST00000503468 CDC42EP4Q9H3Q1 356 aaKnown RBP3.43□□□□□ -1.86
NEDD4-204ENST00000503468 HMGB1P09429 215 aaKnown RBP3.42□□□□□ -1.86
NEDD4-204ENST00000503468 BRD2P25440 801 aaKnown RBP3.42□□□□□ -1.86
NEDD4-204ENST00000503468 GOLGA2Q08379 1002 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 ST3GAL1Q11201 340 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 PROM2Q8N271 834 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 ENAMQ9NRM1 1142 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 ATG9AQ7Z3C6 839 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 FAM9BQ8IZU0 186 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 CABP1Q9NZU7 370 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 TCRBV5S4A2TA0A5A2 114 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 HOXD11P31277 338 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-204ENST00000503468 EXOSC10Q01780 885 aaKnown RBP3.42□□□□□ -1.86
NEDD4-204ENST00000503468 PRIMPOLQ96LW4 560 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 RIPOR2Q9Y4F9 1068 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 A0A0U1RQG5 324 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-204ENST00000503468 FAM53CQ9NYF3 392 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 BCCIPQ9P287 314 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEDD4-204ENST00000503468 PCCAP05165 728 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-204ENST00000503468 MCM4P33991 863 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 ATP8B2P98198 1209 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 SLC52A2Q9HAB3 445 aa3.42□□□□□ -1.86
NEDD4-204ENST00000503468 ESYT2A0FGR8 921 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 CHAF1AQ13111 956 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 IPO4Q8TEX9 1081 aaKnown RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 KIF3AQ9Y496 699 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 CACNA1IQ9P0X4 2223 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 CLGNO14967 610 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 IRX6P78412 446 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 KIAA1211Q6ZU35 1233 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 MORC4Q8TE76 937 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms