RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 SNRPA1P09661 255 aaKnown RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 GNAT2P19087 354 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 TUBB2AQ13885 445 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 ZGPATQ8N5A5 531 aaKnown RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 SMARCC1Q92922 1105 aaPredicted RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 SPATA32Q96LK8 384 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 TUBB2BQ9BVA1 445 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 CTDP1Q9Y5B0 961 aaPredicted RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 CCDC171Q6TFL3 1326 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 TNNT3P45378 269 aaPredicted RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 GNAQP50148 359 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 SPAG1Q07617 926 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 MAP3K12Q12852 859 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 AACSQ86V21 672 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 MRPL50Q8N5N7 158 aaKnown RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 LINS1Q8NG48 757 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 CNNM1Q9NRU3 951 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 ZNF330Q9Y3S2 320 aaPredicted RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 CCDC9Q9Y3X0 531 aaKnown RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 SLIT2O94813 1529 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 MAP9Q49MG5 647 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 PPFIBP1Q86W92 1011 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 CDC5LQ99459 802 aaKnown RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 NAP1L4Q99733 375 aaKnown RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 SRRTQ9BXP5 876 aaKnown RBP5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 PRPF40AO75400 957 aaKnown RBP5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 JAKMIP3Q5VZ66 844 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 CCDC150Q8NCX0 1101 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 CAGE1Q8TC20 777 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 MPHOSPH8Q99549 860 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 GOLIM4O00461 696 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 SLC5A1P13866 664 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 SOGA3Q5TF21 947 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 FAM114A1Q8IWE2 563 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 CCAR1Q8IX12 1150 aaKnown RBP5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 EHBP1Q8NDI1 1231 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 DDX12PQ92771 950 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 LLPHQ9BRT6 129 aaKnown RBP5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 EHMT1Q9H9B1 1298 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 PRDM11Q9NQV5 511 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 ZBTB40Q9NUA8 1239 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 PAXBP1Q9Y5B6 917 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 STK24Q9Y6E0 443 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 ACEP12821 1306 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 RGPD2P0DJD1 1756 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 CALM1P0DP23 149 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 CALM2P0DP24 149 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 CALM3P0DP25 149 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 USP8P40818 1118 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 IL15P40933 162 aaPredicted RBP5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 IQCDQ96DY2 449 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 UBAC1Q9BSL1 405 aa5.54□□□□□ -1.52
NDFIP1-202ENST00000503388 KIF5BP33176 963 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 CCDC184Q52MB2 194 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 KSR2Q6VAB6 950 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 KCNG4Q8TDN1 519 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 TM6SF1Q9BZW5 370 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 GSTO1P78417 241 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 AMPD3Q01432 767 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 HSP90AB2PQ58FF8 381 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 TRMT2AQ8IZ69 625 aaKnown RBP5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 CDK5RAP3Q96JB5 506 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 JAKMIP1Q96N16 626 aaKnown RBP5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 KRT23Q9C075 422 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 RMND1Q9NWS8 449 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 A0A1W2PP64 1363 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 SENP3-EIF4A1A0A087X0R7 540 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 CAVIN4Q5BKX8 364 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 TOM1L2Q6ZVM7 507 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 ZNF397Q8NF99 534 aaPredicted RBP5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 CCDC43Q96MW1 224 aaKnown RBP5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 CTAGE1Q96RT6 745 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 TBC1D2Q9BYX2 928 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 MBIPQ9NS73 344 aa5.53□□□□□ -1.52
NDFIP1-202ENST00000503388 KDM2BQ8NHM5 1336 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 ANKRD18BA2A2Z9 1011 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 STX1AQ16623 288 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 FILIP1Q7Z7B0 1213 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 IQCA1Q86XH1 822 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 UPF3BQ9BZI7 483 aaKnown RBP5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 CWC25Q9NXE8 425 aaPredicted RBP5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 PODXL2Q9NZ53 605 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 USP25Q9UHP3 1055 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 DYNC1I1O14576 645 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 PPP1R12BO60237 982 aaPredicted RBP5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 VAMP4O75379 141 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 OFD1O75665 1012 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 EPS15P42566 896 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 FAM193AP78312 1265 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 IFIT5Q13325 482 aaKnown RBP5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 PPP1R42Q7Z4L9 355 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 BRAPQ7Z569 592 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 IP6K1Q92551 441 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 POLKQ9UBT6 870 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 IQSEC3Q9UPP2 1182 aaPredicted RBP5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 POLR3GO15318 223 aaPredicted RBP5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 DESP17661 470 aa5.52□□□□□ -1.53
NDFIP1-202ENST00000503388 VPS53Q5VIR6 699 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms