RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TAOK3Q9H2K8 898 aa23.13■■□□□ 1.29
PDLIM7-209ENST00000503346 LAMB2P55268 1798 aa23.13■■□□□ 1.29
PDLIM7-209ENST00000503346 SNED1Q8TER0 1413 aa23.13■■□□□ 1.29
PDLIM7-209ENST00000503346 PLA2G12BQ9BX93 195 aa23.12■■□□□ 1.29
PDLIM7-209ENST00000503346 CTSWP56202 376 aa23.11■■□□□ 1.29
PDLIM7-209ENST00000503346 CCDC152Q4G0S7 254 aa23.11■■□□□ 1.29
PDLIM7-209ENST00000503346 GRIPAP1Q4V328 841 aa23.11■■□□□ 1.29
PDLIM7-209ENST00000503346 RNF181Q9P0P0 153 aa23.11■■□□□ 1.29
PDLIM7-209ENST00000503346 NOB1Q9ULX3 412 aaKnown RBP23.11■■□□□ 1.29
PDLIM7-209ENST00000503346 ATP6V0A2Q9Y487 856 aa23.11■■□□□ 1.29
PDLIM7-209ENST00000503346 FKBP4Q02790 459 aaKnown RBP eCLIP23.1■■□□□ 1.29
PDLIM7-209ENST00000503346 TMC4Q7Z404 712 aa23.1■■□□□ 1.29
PDLIM7-209ENST00000503346 ZNF784Q8NCA9 323 aaPredicted RBP23.1■■□□□ 1.29
PDLIM7-209ENST00000503346 KIF16BQ96L93 1317 aa23.09■■□□□ 1.29
PDLIM7-209ENST00000503346 GRM8O00222 908 aa23.09■■□□□ 1.29
PDLIM7-209ENST00000503346 CELF1Q92879 486 aaKnown RBP23.09■■□□□ 1.29
PDLIM7-209ENST00000503346 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
PDLIM7-209ENST00000503346 SLC51AQ86UW1 340 aa23.08■■□□□ 1.29
PDLIM7-209ENST00000503346 SP8Q8IXZ3 490 aa23.08■■□□□ 1.29
PDLIM7-209ENST00000503346 TTLL11Q8NHH1 800 aa23.08■■□□□ 1.29
PDLIM7-209ENST00000503346 ARHGAP45Q92619 1136 aa23.08■■□□□ 1.29
PDLIM7-209ENST00000503346 PSMD1Q99460 953 aa23.08■■□□□ 1.29
PDLIM7-209ENST00000503346 API5Q9BZZ5 524 aaKnown RBP23.08■■□□□ 1.29
PDLIM7-209ENST00000503346 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
PDLIM7-209ENST00000503346 FER1L6Q2WGJ9 1857 aa23.08■■□□□ 1.29
PDLIM7-209ENST00000503346 RTL9Q8NET4 1388 aa23.07■■□□□ 1.28
PDLIM7-209ENST00000503346 SEC31BQ9NQW1 1179 aa23.07■■□□□ 1.28
PDLIM7-209ENST00000503346 ZC3H4Q9UPT8 1303 aaKnown RBP23.07■■□□□ 1.28
PDLIM7-209ENST00000503346 RPS8P62241 208 aaKnown RBP23.06■■□□□ 1.28
PDLIM7-209ENST00000503346 CCDC85AQ96PX6 553 aaPredicted RBP23.06■■□□□ 1.28
PDLIM7-209ENST00000503346 C9orf78Q9NZ63 289 aaPredicted RBP23.06■■□□□ 1.28
PDLIM7-209ENST00000503346 UTYO14607 1347 aa23.06■■□□□ 1.28
PDLIM7-209ENST00000503346 BCAR3O75815 825 aa23.05■■□□□ 1.28
PDLIM7-209ENST00000503346 CSF1RP07333 972 aa23.05■■□□□ 1.28
PDLIM7-209ENST00000503346 GREM2Q9H772 168 aa23.04■■□□□ 1.28
PDLIM7-209ENST00000503346 IPO8O15397 1037 aaKnown RBP23.03■■□□□ 1.28
PDLIM7-209ENST00000503346 CCT4P50991 539 aaKnown RBP23.03■■□□□ 1.28
PDLIM7-209ENST00000503346 FOXO4P98177 505 aa23.03■■□□□ 1.28
PDLIM7-209ENST00000503346 ZNF277Q9NRM2 450 aaPredicted RBP23.03■■□□□ 1.28
PDLIM7-209ENST00000503346 COL4A1P02462 1669 aa23.03■■□□□ 1.28
PDLIM7-209ENST00000503346 SBF1O95248 1867 aa23.02■■□□□ 1.28
PDLIM7-209ENST00000503346 CDC5LQ99459 802 aaKnown RBP23.02■■□□□ 1.28
PDLIM7-209ENST00000503346 RTFDC1Q9BY42 306 aaPredicted RBP23.02■■□□□ 1.28
PDLIM7-209ENST00000503346 NBPF7P0C2Y1 421 aaPredicted RBP23.01■■□□□ 1.27
PDLIM7-209ENST00000503346 ANKRD18AQ8IVF6 992 aa23.01■■□□□ 1.27
PDLIM7-209ENST00000503346 MPNDQ8N594 471 aa23.01■■□□□ 1.27
PDLIM7-209ENST00000503346 IARSP41252 1262 aaKnown RBP23■■□□□ 1.27
PDLIM7-209ENST00000503346 FAM161AQ3B820 660 aa23■■□□□ 1.27
PDLIM7-209ENST00000503346 EPHA10Q5JZY3 1008 aa23■■□□□ 1.27
PDLIM7-209ENST00000503346 DPP8Q6V1X1 898 aaPredicted RBP23■■□□□ 1.27
PDLIM7-209ENST00000503346 USP44Q9H0E7 712 aa23■■□□□ 1.27
PDLIM7-209ENST00000503346 TRIM27P14373 513 aa22.99■■□□□ 1.27
PDLIM7-209ENST00000503346 ITGA6P23229 1130 aa22.99■■□□□ 1.27
PDLIM7-209ENST00000503346 ATF7IPQ6VMQ6 1270 aa22.99■■□□□ 1.27
PDLIM7-209ENST00000503346 SUPT20HQ8NEM7 779 aa22.99■■□□□ 1.27
PDLIM7-209ENST00000503346 KAZALD1Q96I82 304 aa22.99■■□□□ 1.27
PDLIM7-209ENST00000503346 SUCLG2Q96I99 432 aa22.99■■□□□ 1.27
PDLIM7-209ENST00000503346 VPS33BQ9H267 617 aa22.99■■□□□ 1.27
PDLIM7-209ENST00000503346 LRRC37AA6NMS7 1700 aa22.99■■□□□ 1.27
PDLIM7-209ENST00000503346 FRAT1Q92837 279 aaPredicted RBP22.98■■□□□ 1.27
PDLIM7-209ENST00000503346 TAF1P21675 1872 aa22.97■■□□□ 1.27
PDLIM7-209ENST00000503346 INTS3Q68E01 1043 aaKnown RBP22.97■■□□□ 1.27
PDLIM7-209ENST00000503346 LMBR1LQ6UX01 489 aa22.97■■□□□ 1.27
PDLIM7-209ENST00000503346 GPBP1L1Q9HC44 474 aaPredicted RBP22.97■■□□□ 1.27
PDLIM7-209ENST00000503346 BSDC1Q9NW68 430 aaPredicted RBP22.97■■□□□ 1.27
PDLIM7-209ENST00000503346 ANKRD18BA2A2Z9 1011 aa22.96■■□□□ 1.27
PDLIM7-209ENST00000503346 GPSM2P81274 684 aa22.96■■□□□ 1.27
PDLIM7-209ENST00000503346 ZKSCAN2Q63HK3 967 aa22.96■■□□□ 1.27
PDLIM7-209ENST00000503346 ZNF526Q8TF50 670 aaPredicted RBP22.96■■□□□ 1.27
PDLIM7-209ENST00000503346 PODXL2Q9NZ53 605 aa22.96■■□□□ 1.27
PDLIM7-209ENST00000503346 NSFL1CQ9UNZ2 370 aaKnown RBP22.96■■□□□ 1.27
PDLIM7-209ENST00000503346 GLTPD2A6NH11 291 aa22.95■■□□□ 1.26
PDLIM7-209ENST00000503346 MYH3P11055 1940 aa22.95■■□□□ 1.26
PDLIM7-209ENST00000503346 IGHMBP2P38935 993 aaKnown RBP22.95■■□□□ 1.26
PDLIM7-209ENST00000503346 IFIT5Q13325 482 aaKnown RBP22.95■■□□□ 1.26
PDLIM7-209ENST00000503346 RABL6Q3YEC7 729 aaPredicted RBP22.95■■□□□ 1.26
PDLIM7-209ENST00000503346 DUOX1Q9NRD9 1551 aa22.94■■□□□ 1.26
PDLIM7-209ENST00000503346 KDM2BQ8NHM5 1336 aa22.94■■□□□ 1.26
PDLIM7-209ENST00000503346 PPIP5K2O43314 1243 aa22.94■■□□□ 1.26
PDLIM7-209ENST00000503346 LARGE2Q8N3Y3 721 aa22.94■■□□□ 1.26
PDLIM7-209ENST00000503346 BICC1Q9H694 974 aaKnown RBP22.94■■□□□ 1.26
PDLIM7-209ENST00000503346 TNNQ9UQP3 1299 aa22.94■■□□□ 1.26
PDLIM7-209ENST00000503346 CHMP3Q9Y3E7 222 aa22.94■■□□□ 1.26
PDLIM7-209ENST00000503346 FZD9O00144 591 aa22.93■■□□□ 1.26
PDLIM7-209ENST00000503346 KIAA2012Q0VF49 1180 aa22.93■■□□□ 1.26
PDLIM7-209ENST00000503346 JDP2Q8WYK2 163 aa22.93■■□□□ 1.26
PDLIM7-209ENST00000503346 MINPP1Q9UNW1 487 aa22.93■■□□□ 1.26
PDLIM7-209ENST00000503346 TIAM2Q8IVF5 1701 aa22.93■■□□□ 1.26
PDLIM7-209ENST00000503346 AOC3Q16853 763 aa22.92■■□□□ 1.26
PDLIM7-209ENST00000503346 CCDC57Q2TAC2 916 aa22.92■■□□□ 1.26
PDLIM7-209ENST00000503346 DPY19L2Q6NUT2 758 aa22.92■■□□□ 1.26
PDLIM7-209ENST00000503346 ANKRD44Q8N8A2 993 aa22.92■■□□□ 1.26
PDLIM7-209ENST00000503346 TBC1D16Q8TBP0 767 aa22.92■■□□□ 1.26
PDLIM7-209ENST00000503346 MPHOSPH8Q99549 860 aa22.92■■□□□ 1.26
PDLIM7-209ENST00000503346 POLLQ9UGP5 575 aa22.92■■□□□ 1.26
PDLIM7-209ENST00000503346 DICER1Q9UPY3 1922 aaKnown RBP22.92■■□□□ 1.26
PDLIM7-209ENST00000503346 COL4A5P29400 1685 aa22.91■■□□□ 1.26
PDLIM7-209ENST00000503346 XDHP47989 1333 aa22.91■■□□□ 1.26
PDLIM7-209ENST00000503346 UBTFL1P0CB47 393 aaPredicted RBP22.91■■□□□ 1.26
PDLIM7-209ENST00000503346 ANKIB1Q9P2G1 1089 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms