RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 UTYO14607 1347 aa22.45■■□□□ 1.18
SMAD1-204ENST00000503324 SNED1Q8TER0 1413 aa22.45■■□□□ 1.18
SMAD1-204ENST00000503324 NFKBIEO00221 500 aa22.44■■□□□ 1.18
SMAD1-204ENST00000503324 IPO8O15397 1037 aaKnown RBP22.44■■□□□ 1.18
SMAD1-204ENST00000503324 TAF1P21675 1872 aa22.44■■□□□ 1.18
SMAD1-204ENST00000503324 GRAPQ13588 217 aa22.44■■□□□ 1.18
SMAD1-204ENST00000503324 CHD4Q14839 1912 aa22.44■■□□□ 1.18
SMAD1-204ENST00000503324 ATF7IPQ6VMQ6 1270 aa22.44■■□□□ 1.18
SMAD1-204ENST00000503324 TTLL11Q8NHH1 800 aa22.44■■□□□ 1.18
SMAD1-204ENST00000503324 GRAPLQ8TC17 118 aaPredicted RBP22.44■■□□□ 1.18
SMAD1-204ENST00000503324 PPEF1O14829 653 aaPredicted RBP22.43■■□□□ 1.18
SMAD1-204ENST00000503324 NBPF7P0C2Y1 421 aaPredicted RBP22.43■■□□□ 1.18
SMAD1-204ENST00000503324 CCT4P50991 539 aaKnown RBP22.43■■□□□ 1.18
SMAD1-204ENST00000503324 CCDC152Q4G0S7 254 aa22.43■■□□□ 1.18
SMAD1-204ENST00000503324 C9orf78Q9NZ63 289 aaPredicted RBP22.43■■□□□ 1.18
SMAD1-204ENST00000503324 MYH3P11055 1940 aa22.43■■□□□ 1.18
SMAD1-204ENST00000503324 FER1L6Q2WGJ9 1857 aa22.43■■□□□ 1.18
SMAD1-204ENST00000503324 BBOX1O75936 387 aa22.42■■□□□ 1.18
SMAD1-204ENST00000503324 FOXO4P98177 505 aa22.42■■□□□ 1.18
SMAD1-204ENST00000503324 RASSF7Q02833 373 aa22.42■■□□□ 1.18
SMAD1-204ENST00000503324 CCDC93Q567U6 631 aa22.42■■□□□ 1.18
SMAD1-204ENST00000503324 SOGA3Q5TF21 947 aa22.42■■□□□ 1.18
SMAD1-204ENST00000503324 CELF1Q92879 486 aaKnown RBP22.42■■□□□ 1.18
SMAD1-204ENST00000503324 CCDC85AQ96PX6 553 aaPredicted RBP22.42■■□□□ 1.18
SMAD1-204ENST00000503324 USP44Q9H0E7 712 aa22.42■■□□□ 1.18
SMAD1-204ENST00000503324 SEC31BQ9NQW1 1179 aa22.42■■□□□ 1.18
SMAD1-204ENST00000503324 RTL9Q8NET4 1388 aa22.41■■□□□ 1.18
SMAD1-204ENST00000503324 CSF1RP07333 972 aa22.41■■□□□ 1.18
SMAD1-204ENST00000503324 PRELPP51888 382 aa22.41■■□□□ 1.18
SMAD1-204ENST00000503324 EPHA10Q5JZY3 1008 aa22.41■■□□□ 1.18
SMAD1-204ENST00000503324 ZKSCAN2Q63HK3 967 aa22.41■■□□□ 1.18
SMAD1-204ENST00000503324 INTS3Q68E01 1043 aaKnown RBP22.41■■□□□ 1.18
SMAD1-204ENST00000503324 KAZALD1Q96I82 304 aa22.4■■□□□ 1.18
SMAD1-204ENST00000503324 SUCLG2Q96I99 432 aa22.4■■□□□ 1.18
SMAD1-204ENST00000503324 GREM2Q9H772 168 aa22.4■■□□□ 1.18
SMAD1-204ENST00000503324 RCAN3Q9UKA8 241 aa22.4■■□□□ 1.18
SMAD1-204ENST00000503324 ATP6V0A2Q9Y487 856 aa22.4■■□□□ 1.18
SMAD1-204ENST00000503324 LTBP3Q9NS15 1303 aa22.39■■□□□ 1.18
SMAD1-204ENST00000503324 LRRC37AA6NMS7 1700 aa22.38■■□□□ 1.17
SMAD1-204ENST00000503324 CC2D2BQ6DHV5 1058 aa22.38■■□□□ 1.17
SMAD1-204ENST00000503324 SP8Q8IXZ3 490 aa22.38■■□□□ 1.17
SMAD1-204ENST00000503324 RTKN2Q8IZC4 609 aa22.38■■□□□ 1.17
SMAD1-204ENST00000503324 CLUAP1Q96AJ1 413 aa22.38■■□□□ 1.17
SMAD1-204ENST00000503324 SBF1O95248 1867 aa22.38■■□□□ 1.17
SMAD1-204ENST00000503324 RPS8P62241 208 aaKnown RBP22.37■■□□□ 1.17
SMAD1-204ENST00000503324 FAM161AQ3B820 660 aa22.37■■□□□ 1.17
SMAD1-204ENST00000503324 TMC4Q7Z404 712 aa22.37■■□□□ 1.17
SMAD1-204ENST00000503324 TAOK3Q9H2K8 898 aa22.37■■□□□ 1.17
SMAD1-204ENST00000503324 FKBP4Q02790 459 aaKnown RBP eCLIP22.36■■□□□ 1.17
SMAD1-204ENST00000503324 LMNB1P20700 586 aa22.35■■□□□ 1.17
SMAD1-204ENST00000503324 YY1P25490 414 aa22.35■■□□□ 1.17
SMAD1-204ENST00000503324 C9orf131Q5VYM1 1079 aa22.35■■□□□ 1.17
SMAD1-204ENST00000503324 LMBR1LQ6UX01 489 aa22.35■■□□□ 1.17
SMAD1-204ENST00000503324 RLBP1P12271 317 aa22.34■■□□□ 1.17
SMAD1-204ENST00000503324 ITGA6P23229 1130 aa22.34■■□□□ 1.17
SMAD1-204ENST00000503324 RABL6Q3YEC7 729 aaPredicted RBP22.34■■□□□ 1.17
SMAD1-204ENST00000503324 GRIPAP1Q4V328 841 aa22.34■■□□□ 1.17
SMAD1-204ENST00000503324 TMEM57Q8N5G2 664 aa22.34■■□□□ 1.17
SMAD1-204ENST00000503324 ANKRD44Q8N8A2 993 aa22.34■■□□□ 1.17
SMAD1-204ENST00000503324 CDC5LQ99459 802 aaKnown RBP22.34■■□□□ 1.17
SMAD1-204ENST00000503324 PSMD1Q99460 953 aa22.34■■□□□ 1.17
SMAD1-204ENST00000503324 ANKRD18AQ8IVF6 992 aa22.33■■□□□ 1.17
SMAD1-204ENST00000503324 DZIP1LQ8IYY4 767 aaKnown RBP22.33■■□□□ 1.17
SMAD1-204ENST00000503324 MEIS3Q99687 375 aa22.33■■□□□ 1.17
SMAD1-204ENST00000503324 BICC1Q9H694 974 aaKnown RBP22.33■■□□□ 1.17
SMAD1-204ENST00000503324 RNF181Q9P0P0 153 aa22.33■■□□□ 1.17
SMAD1-204ENST00000503324 DUOX1Q9NRD9 1551 aa22.31■■□□□ 1.16
SMAD1-204ENST00000503324 UBTFL1P0CB47 393 aaPredicted RBP22.31■■□□□ 1.16
SMAD1-204ENST00000503324 RTFDC1Q9BY42 306 aaPredicted RBP22.31■■□□□ 1.16
SMAD1-204ENST00000503324 ZNF277Q9NRM2 450 aaPredicted RBP22.31■■□□□ 1.16
SMAD1-204ENST00000503324 LTBP1Q14766 1721 aa22.31■■□□□ 1.16
SMAD1-204ENST00000503324 CCDC88AQ3V6T2 1871 aa22.3■■□□□ 1.16
SMAD1-204ENST00000503324 ANKRD18BA2A2Z9 1011 aa22.3■■□□□ 1.16
SMAD1-204ENST00000503324 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
SMAD1-204ENST00000503324 MPNDQ8N594 471 aa22.3■■□□□ 1.16
SMAD1-204ENST00000503324 TMX4Q9H1E5 349 aaPredicted RBP22.3■■□□□ 1.16
SMAD1-204ENST00000503324 BSDC1Q9NW68 430 aaPredicted RBP22.3■■□□□ 1.16
SMAD1-204ENST00000503324 CHMP3Q9Y3E7 222 aa22.3■■□□□ 1.16
SMAD1-204ENST00000503324 GPSM2P81274 684 aa22.29■■□□□ 1.16
SMAD1-204ENST00000503324 IFIT5Q13325 482 aaKnown RBP22.29■■□□□ 1.16
SMAD1-204ENST00000503324 DPP8Q6V1X1 898 aaPredicted RBP22.29■■□□□ 1.16
SMAD1-204ENST00000503324 SPEF2Q9C093 1822 aa22.29■■□□□ 1.16
SMAD1-204ENST00000503324 DICER1Q9UPY3 1922 aaKnown RBP22.28■■□□□ 1.16
SMAD1-204ENST00000503324 PLIN1O60240 522 aa22.28■■□□□ 1.16
SMAD1-204ENST00000503324 PANK1Q8TE04 598 aa22.28■■□□□ 1.16
SMAD1-204ENST00000503324 COL4A5P29400 1685 aa22.27■■□□□ 1.16
SMAD1-204ENST00000503324 GNAI3P08754 354 aa22.27■■□□□ 1.16
SMAD1-204ENST00000503324 IGHMBP2P38935 993 aaKnown RBP22.27■■□□□ 1.16
SMAD1-204ENST00000503324 IARSP41252 1262 aaKnown RBP22.27■■□□□ 1.16
SMAD1-204ENST00000503324 TIAM2Q8IVF5 1701 aa22.27■■□□□ 1.16
SMAD1-204ENST00000503324 PODXL2Q9NZ53 605 aa22.27■■□□□ 1.16
SMAD1-204ENST00000503324 NSFL1CQ9UNZ2 370 aaKnown RBP22.27■■□□□ 1.16
SMAD1-204ENST00000503324 LRRFIP2Q9Y608 721 aaKnown RBP22.27■■□□□ 1.16
SMAD1-204ENST00000503324 CCDC57Q2TAC2 916 aa22.26■■□□□ 1.15
SMAD1-204ENST00000503324 ZNF594Q96JF6 807 aaPredicted RBP22.26■■□□□ 1.15
SMAD1-204ENST00000503324 MINPP1Q9UNW1 487 aa22.26■■□□□ 1.15
SMAD1-204ENST00000503324 ZC3H4Q9UPT8 1303 aaKnown RBP22.26■■□□□ 1.15
SMAD1-204ENST00000503324 ITPRIPQ8IWB1 547 aa22.25■■□□□ 1.15
SMAD1-204ENST00000503324 SUPT20HQ8NEM7 779 aa22.25■■□□□ 1.15
SMAD1-204ENST00000503324 POLLQ9UGP5 575 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms