RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 PDZRN3Q9UPQ7 1066 aa18.92■□□□□ 0.62
MBD4-204ENST00000503197 NOP58Q9Y2X3 529 aaKnown RBP18.92■□□□□ 0.62
MBD4-204ENST00000503197 CHMP3Q9Y3E7 222 aa18.92■□□□□ 0.62
MBD4-204ENST00000503197 NUCB1Q02818 461 aa18.91■□□□□ 0.62
MBD4-204ENST00000503197 PTPN12Q05209 780 aaKnown RBP18.91■□□□□ 0.62
MBD4-204ENST00000503197 GREM2Q9H772 168 aa18.91■□□□□ 0.62
MBD4-204ENST00000503197 NRXN2Q9P2S2 1712 aa18.91■□□□□ 0.62
MBD4-204ENST00000503197 TNRC6CQ9HCJ0 1690 aaKnown RBP18.91■□□□□ 0.62
MBD4-204ENST00000503197 SURF6O75683 361 aaKnown RBP18.91■□□□□ 0.62
MBD4-204ENST00000503197 GTF2E1P29083 439 aaPredicted RBP18.91■□□□□ 0.62
MBD4-204ENST00000503197 PRR5LQ6MZQ0 368 aa18.91■□□□□ 0.62
MBD4-204ENST00000503197 CNBD1Q8NA66 436 aa18.91■□□□□ 0.62
MBD4-204ENST00000503197 COPRSQ9NQ92 184 aa18.91■□□□□ 0.62
MBD4-204ENST00000503197 MMP10P09238 476 aa18.89■□□□□ 0.62
MBD4-204ENST00000503197 HSP90B1P14625 803 aaKnown RBP18.89■□□□□ 0.62
MBD4-204ENST00000503197 APBB1O00213 710 aa18.89■□□□□ 0.61
MBD4-204ENST00000503197 ANKRD45Q5TZF3 282 aa18.89■□□□□ 0.61
MBD4-204ENST00000503197 ZNF594Q96JF6 807 aaPredicted RBP18.88■□□□□ 0.61
MBD4-204ENST00000503197 SRCAPQ6ZRS2 3230 aa18.88■□□□□ 0.61
MBD4-204ENST00000503197 RIC1Q4ADV7 1423 aa18.88■□□□□ 0.61
MBD4-204ENST00000503197 ITGA6P23229 1130 aa18.88■□□□□ 0.61
MBD4-204ENST00000503197 SF3B3Q15393 1217 aaKnown RBP18.88■□□□□ 0.61
MBD4-204ENST00000503197 CHD1LQ86WJ1 897 aa18.88■□□□□ 0.61
MBD4-204ENST00000503197 SIL1Q9H173 461 aa18.88■□□□□ 0.61
MBD4-204ENST00000503197 COL4A1P02462 1669 aa18.87■□□□□ 0.61
MBD4-204ENST00000503197 RTL9Q8NET4 1388 aa18.87■□□□□ 0.61
MBD4-204ENST00000503197 IFIT5Q13325 482 aaKnown RBP18.87■□□□□ 0.61
MBD4-204ENST00000503197 CCDC57Q2TAC2 916 aa18.87■□□□□ 0.61
MBD4-204ENST00000503197 LNPKQ9C0E8 428 aa18.87■□□□□ 0.61
MBD4-204ENST00000503197 NPHP1O15259 732 aa18.86■□□□□ 0.61
MBD4-204ENST00000503197 SMARCA5O60264 1052 aaPredicted RBP18.86■□□□□ 0.61
MBD4-204ENST00000503197 PDE4AP27815 886 aa18.86■□□□□ 0.61
MBD4-204ENST00000503197 CCDC152Q4G0S7 254 aa18.86■□□□□ 0.61
MBD4-204ENST00000503197 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 SASH1O94885 1247 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 R3HDM1Q15032 1099 aaKnown RBP18.85■□□□□ 0.61
MBD4-204ENST00000503197 HSP90AB4PQ58FF6 505 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 SLC16A10Q8TF71 515 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 NLRP3Q96P20 1036 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 LRRCC1Q9C099 1032 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 SEC31BQ9NQW1 1179 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.85■□□□□ 0.61
MBD4-204ENST00000503197 ANKRD31Q8N7Z5 1873 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 LRP5O75197 1615 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 ANKRD18BA2A2Z9 1011 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 ST5P78524 1137 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 ATG9AQ7Z3C6 839 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 RHPN1Q8TCX5 695 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 PARP3Q9Y6F1 533 aa18.85■□□□□ 0.61
MBD4-204ENST00000503197 TAF1P21675 1872 aa18.84■□□□□ 0.61
MBD4-204ENST00000503197 G3BP1Q13283 466 aaKnown RBP eCLIP18.84■□□□□ 0.61
MBD4-204ENST00000503197 PUS3Q9BZE2 481 aaKnown RBP18.84■□□□□ 0.61
MBD4-204ENST00000503197 LRRC24Q50LG9 513 aa18.83■□□□□ 0.61
MBD4-204ENST00000503197 KIF1BPQ96EK5 621 aa18.83■□□□□ 0.61
MBD4-204ENST00000503197 OS9Q13438 667 aaPredicted RBP18.83■□□□□ 0.6
MBD4-204ENST00000503197 C16orf71Q8IYS4 520 aaPredicted RBP18.83■□□□□ 0.6
MBD4-204ENST00000503197 IL1RAPL2Q9NP60 686 aa18.83■□□□□ 0.6
MBD4-204ENST00000503197 EYA2O00167 538 aa18.82■□□□□ 0.6
MBD4-204ENST00000503197 SPEF2Q9C093 1822 aa18.82■□□□□ 0.6
MBD4-204ENST00000503197 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
MBD4-204ENST00000503197 CIAO1O76071 339 aa18.81■□□□□ 0.6
MBD4-204ENST00000503197 RGS3P49796 1198 aa18.81■□□□□ 0.6
MBD4-204ENST00000503197 CRY2Q49AN0 593 aa18.81■□□□□ 0.6
MBD4-204ENST00000503197 ERC1Q8IUD2 1116 aa18.81■□□□□ 0.6
MBD4-204ENST00000503197 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
MBD4-204ENST00000503197 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
MBD4-204ENST00000503197 BCL11AQ9H165 835 aa18.81■□□□□ 0.6
MBD4-204ENST00000503197 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
MBD4-204ENST00000503197 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
MBD4-204ENST00000503197 RIPOR2Q9Y4F9 1068 aa18.8■□□□□ 0.6
MBD4-204ENST00000503197 ZBTB7AO95365 584 aa18.8■□□□□ 0.6
MBD4-204ENST00000503197 IL15P40933 162 aaPredicted RBP18.8■□□□□ 0.6
MBD4-204ENST00000503197 LDHAL6AQ6ZMR3 332 aa18.8■□□□□ 0.6
MBD4-204ENST00000503197 PSDA5PKW4 1024 aaPredicted RBP18.79■□□□□ 0.6
MBD4-204ENST00000503197 TFCP2Q12800 502 aa18.79■□□□□ 0.6
MBD4-204ENST00000503197 CELF1Q92879 486 aaKnown RBP18.78■□□□□ 0.6
MBD4-204ENST00000503197 ZBTB47Q9UFB7 747 aaPredicted RBP18.78■□□□□ 0.6
MBD4-204ENST00000503197 SALL3Q9BXA9 1300 aa18.78■□□□□ 0.6
MBD4-204ENST00000503197 CDC5LQ99459 802 aaKnown RBP18.78■□□□□ 0.6
MBD4-204ENST00000503197 COL11A2P13942 1736 aaPredicted RBP18.78■□□□□ 0.6
MBD4-204ENST00000503197 MTFR1LQ9H019 292 aa18.77■□□□□ 0.6
MBD4-204ENST00000503197 PLEKHM2Q8IWE5 1019 aa18.77■□□□□ 0.59
MBD4-204ENST00000503197 EAF2Q96CJ1 260 aaPredicted RBP18.77■□□□□ 0.59
MBD4-204ENST00000503197 CNNM1Q9NRU3 951 aa18.77■□□□□ 0.59
MBD4-204ENST00000503197 DDX46Q7L014 1031 aaKnown RBP18.76■□□□□ 0.59
MBD4-204ENST00000503197 ANKRD18AQ8IVF6 992 aa18.76■□□□□ 0.59
MBD4-204ENST00000503197 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
MBD4-204ENST00000503197 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
MBD4-204ENST00000503197 HOXA10P31260 410 aaPredicted RBP18.75■□□□□ 0.59
MBD4-204ENST00000503197 IGHMBP2P38935 993 aaKnown RBP18.75■□□□□ 0.59
MBD4-204ENST00000503197 CLASRPQ8N2M8 674 aaKnown RBP18.75■□□□□ 0.59
MBD4-204ENST00000503197 VGLL2Q8N8G2 317 aa18.75■□□□□ 0.59
MBD4-204ENST00000503197 RPS8P62241 208 aaKnown RBP18.75■□□□□ 0.59
MBD4-204ENST00000503197 RPGRQ92834 1020 aaKnown RBP18.75■□□□□ 0.59
MBD4-204ENST00000503197 C10orf71Q711Q0 1435 aa18.74■□□□□ 0.59
MBD4-204ENST00000503197 PDE6BP35913 854 aa18.74■□□□□ 0.59
MBD4-204ENST00000503197 TNNI3KQ59H18 835 aa18.74■□□□□ 0.59
MBD4-204ENST00000503197 BSDC1Q9NW68 430 aaPredicted RBP18.74■□□□□ 0.59
MBD4-204ENST00000503197 FPGT-TNNI3KV9GXZ4 949 aa18.74■□□□□ 0.59
MBD4-204ENST00000503197 A0A1B0GUL6 1792 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms