RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 GRAPLQ8TC17 118 aaPredicted RBP11.21□□□□□ -0.61
RNF4-203ENST00000503123 DNAAF4Q8WXU2 420 aa11.21□□□□□ -0.61
RNF4-203ENST00000503123 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
RNF4-203ENST00000503123 COL4A1P02462 1669 aa11.2□□□□□ -0.62
RNF4-203ENST00000503123 DUOX1Q9NRD9 1551 aa11.2□□□□□ -0.62
RNF4-203ENST00000503123 GLTPD2A6NH11 291 aa11.2□□□□□ -0.62
RNF4-203ENST00000503123 NEURL1BA8MQ27 555 aa11.2□□□□□ -0.62
RNF4-203ENST00000503123 PDE8AO60658 829 aa11.2□□□□□ -0.62
RNF4-203ENST00000503123 SP8Q8IXZ3 490 aa11.2□□□□□ -0.62
RNF4-203ENST00000503123 ZNF526Q8TF50 670 aaPredicted RBP11.2□□□□□ -0.62
RNF4-203ENST00000503123 VPS33BQ9H267 617 aa11.2□□□□□ -0.62
RNF4-203ENST00000503123 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
RNF4-203ENST00000503123 KIF3CO14782 793 aa11.19□□□□□ -0.62
RNF4-203ENST00000503123 IARSP41252 1262 aaKnown RBP11.19□□□□□ -0.62
RNF4-203ENST00000503123 C1QTNF8P60827 252 aa11.19□□□□□ -0.62
RNF4-203ENST00000503123 CCDC152Q4G0S7 254 aa11.19□□□□□ -0.62
RNF4-203ENST00000503123 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
RNF4-203ENST00000503123 OLFM4Q6UX06 510 aa11.19□□□□□ -0.62
RNF4-203ENST00000503123 COL4A5P29400 1685 aa11.18□□□□□ -0.62
RNF4-203ENST00000503123 SCN9AQ15858 1988 aa11.18□□□□□ -0.62
RNF4-203ENST00000503123 H7C1W4 665 aa11.18□□□□□ -0.62
RNF4-203ENST00000503123 GCKRQ14397 625 aa11.18□□□□□ -0.62
RNF4-203ENST00000503123 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
RNF4-203ENST00000503123 ALDH1L2Q3SY69 923 aa11.18□□□□□ -0.62
RNF4-203ENST00000503123 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
RNF4-203ENST00000503123 SUPT20HQ8NEM7 779 aa11.18□□□□□ -0.62
RNF4-203ENST00000503123 PLA2G12BQ9BX93 195 aa11.18□□□□□ -0.62
RNF4-203ENST00000503123 RTFDC1Q9BY42 306 aaPredicted RBP11.18□□□□□ -0.62
RNF4-203ENST00000503123 PTPRCP08575 1304 aa11.17□□□□□ -0.62
RNF4-203ENST00000503123 CTSWP56202 376 aa11.17□□□□□ -0.62
RNF4-203ENST00000503123 CDCA7LQ96GN5 454 aa11.17□□□□□ -0.62
RNF4-203ENST00000503123 NMRK2Q9NPI5 230 aa11.17□□□□□ -0.62
RNF4-203ENST00000503123 ZNF277Q9NRM2 450 aaPredicted RBP11.17□□□□□ -0.62
RNF4-203ENST00000503123 POLR2AP24928 1970 aaKnown RBP11.17□□□□□ -0.62
RNF4-203ENST00000503123 ADAMTSL1Q8N6G6 1762 aa11.16□□□□□ -0.62
RNF4-203ENST00000503123 FZD9O00144 591 aa11.16□□□□□ -0.62
RNF4-203ENST00000503123 ALDH1L1O75891 902 aa11.16□□□□□ -0.62
RNF4-203ENST00000503123 TOMM70O94826 608 aa11.16□□□□□ -0.62
RNF4-203ENST00000503123 VEGFAP15692 232 aaPredicted RBP11.16□□□□□ -0.62
RNF4-203ENST00000503123 CASP7P55210 303 aa11.16□□□□□ -0.62
RNF4-203ENST00000503123 RPS8P62241 208 aaKnown RBP11.16□□□□□ -0.62
RNF4-203ENST00000503123 BEND3Q5T5X7 828 aa11.16□□□□□ -0.62
RNF4-203ENST00000503123 UBE3BQ7Z3V4 1068 aa11.16□□□□□ -0.62
RNF4-203ENST00000503123 MRPL50Q8N5N7 158 aaKnown RBP11.16□□□□□ -0.62
RNF4-203ENST00000503123 JDP2Q8WYK2 163 aa11.16□□□□□ -0.62
RNF4-203ENST00000503123 CELF1Q92879 486 aaKnown RBP11.16□□□□□ -0.62
RNF4-203ENST00000503123 TRPM7Q96QT4 1865 aa11.16□□□□□ -0.62
RNF4-203ENST00000503123 ZNF646O15015 1829 aaPredicted RBP11.16□□□□□ -0.62
RNF4-203ENST00000503123 CEP350Q5VT06 3117 aa11.15□□□□□ -0.62
RNF4-203ENST00000503123 F6X3S4 739 aa11.15□□□□□ -0.62
RNF4-203ENST00000503123 BRPF1P55201 1214 aaPredicted RBP11.15□□□□□ -0.62
RNF4-203ENST00000503123 DPP8Q6V1X1 898 aaPredicted RBP11.15□□□□□ -0.62
RNF4-203ENST00000503123 MPNDQ8N594 471 aa11.15□□□□□ -0.62
RNF4-203ENST00000503123 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
RNF4-203ENST00000503123 RBM46Q8TBY0 533 aaKnown RBP11.15□□□□□ -0.62
RNF4-203ENST00000503123 SSH1Q8WYL5 1049 aa11.15□□□□□ -0.62
RNF4-203ENST00000503123 L3MBTL3Q96JM7 780 aaPredicted RBP11.15□□□□□ -0.62
RNF4-203ENST00000503123 CDC5LQ99459 802 aaKnown RBP11.15□□□□□ -0.62
RNF4-203ENST00000503123 KIAA2012Q0VF49 1180 aa11.14□□□□□ -0.63
RNF4-203ENST00000503123 C16orf71Q8IYS4 520 aaPredicted RBP11.14□□□□□ -0.63
RNF4-203ENST00000503123 LARGE2Q8N3Y3 721 aa11.14□□□□□ -0.63
RNF4-203ENST00000503123 SRCIN1Q9C0H9 1055 aa11.14□□□□□ -0.63
RNF4-203ENST00000503123 RRAGCQ9HB90 399 aa11.14□□□□□ -0.63
RNF4-203ENST00000503123 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
RNF4-203ENST00000503123 MYH13Q9UKX3 1938 aa11.13□□□□□ -0.63
RNF4-203ENST00000503123 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
RNF4-203ENST00000503123 POTECB2RU33 542 aa11.13□□□□□ -0.63
RNF4-203ENST00000503123 GRM8O00222 908 aa11.13□□□□□ -0.63
RNF4-203ENST00000503123 PPIP5K2O43314 1243 aa11.13□□□□□ -0.63
RNF4-203ENST00000503123 CSF1RP07333 972 aa11.13□□□□□ -0.63
RNF4-203ENST00000503123 ANKRD18AQ8IVF6 992 aa11.13□□□□□ -0.63
RNF4-203ENST00000503123 GPC2Q8N158 579 aa11.13□□□□□ -0.63
RNF4-203ENST00000503123 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
RNF4-203ENST00000503123 SEC31BQ9NQW1 1179 aa11.13□□□□□ -0.63
RNF4-203ENST00000503123 UTYO14607 1347 aa11.12□□□□□ -0.63
RNF4-203ENST00000503123 ZNF541Q9H0D2 1346 aa11.12□□□□□ -0.63
RNF4-203ENST00000503123 DDNO94850 711 aaPredicted RBP11.12□□□□□ -0.63
RNF4-203ENST00000503123 EIF6P56537 245 aaKnown RBP11.12□□□□□ -0.63
RNF4-203ENST00000503123 HNRNPUQ00839 825 aaKnown RBP eCLIP11.12□□□□□ -0.63
RNF4-203ENST00000503123 FSTL1Q12841 308 aa11.12□□□□□ -0.63
RNF4-203ENST00000503123 AOC3Q16853 763 aa11.12□□□□□ -0.63
RNF4-203ENST00000503123 SLC51AQ86UW1 340 aa11.12□□□□□ -0.63
RNF4-203ENST00000503123 NIM1KQ8IY84 436 aa11.12□□□□□ -0.63
RNF4-203ENST00000503123 GREM2Q9H772 168 aa11.12□□□□□ -0.63
RNF4-203ENST00000503123 SMC4Q9NTJ3 1288 aa11.12□□□□□ -0.63
RNF4-203ENST00000503123 BSDC1Q9NW68 430 aaPredicted RBP11.12□□□□□ -0.63
RNF4-203ENST00000503123 ZBED9Q6R2W3 1325 aa11.11□□□□□ -0.63
RNF4-203ENST00000503123 KIF16BQ96L93 1317 aa11.11□□□□□ -0.63
RNF4-203ENST00000503123 SLC4A10Q6U841 1118 aa11.11□□□□□ -0.63
RNF4-203ENST00000503123 EYA3Q99504 573 aa11.11□□□□□ -0.63
RNF4-203ENST00000503123 C9orf78Q9NZ63 289 aaPredicted RBP11.11□□□□□ -0.63
RNF4-203ENST00000503123 ZNRF3Q9ULT6 936 aa11.11□□□□□ -0.63
RNF4-203ENST00000503123 NSFL1CQ9UNZ2 370 aaKnown RBP11.11□□□□□ -0.63
RNF4-203ENST00000503123 XDHP47989 1333 aa11.1□□□□□ -0.63
RNF4-203ENST00000503123 ECM29Q5VYK3 1845 aa11.1□□□□□ -0.63
RNF4-203ENST00000503123 HSPA6P17066 643 aa11.1□□□□□ -0.63
RNF4-203ENST00000503123 ITGA6P23229 1130 aa11.1□□□□□ -0.63
RNF4-203ENST00000503123 RARSP54136 660 aaKnown RBP11.1□□□□□ -0.63
RNF4-203ENST00000503123 GPSM2P81274 684 aa11.1□□□□□ -0.63
RNF4-203ENST00000503123 FOXO4P98177 505 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms