RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 ATAD2Q6PL18 1390 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 CCDC144AA2RUR9 1427 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 IFT172Q9UG01 1749 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 HTATSF1O43719 755 aaKnown RBP7.7□□□□□ -1.18
CLCN3-203ENST00000502998 BAG4O95429 457 aaKnown RBP7.7□□□□□ -1.18
CLCN3-203ENST00000502998 CCDC175P0C221 793 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 EIF5P55010 431 aaKnown RBP7.7□□□□□ -1.18
CLCN3-203ENST00000502998 ICA1Q05084 483 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 TTC31Q49AM3 519 aaPredicted RBP7.7□□□□□ -1.18
CLCN3-203ENST00000502998 C16orf87Q6PH81 154 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 CCDC73Q6ZRK6 1079 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 OTUD6AQ7L8S5 288 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 TAX1BP1Q86VP1 789 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 RPUSD2Q8IZ73 545 aaKnown RBP7.7□□□□□ -1.18
CLCN3-203ENST00000502998 TDRD7Q8NHU6 1098 aaKnown RBP7.7□□□□□ -1.18
CLCN3-203ENST00000502998 BHMTQ93088 406 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 TEKT1Q969V4 418 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 LRRC59Q96AG4 307 aaKnown RBP7.7□□□□□ -1.18
CLCN3-203ENST00000502998 NGLY1Q96IV0 654 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 AKAP2Q9Y2D5 859 aa7.7□□□□□ -1.18
CLCN3-203ENST00000502998 THRAP3Q9Y2W1 955 aaKnown RBP7.7□□□□□ -1.18
CLCN3-203ENST00000502998 SPATA31E1Q6ZUB1 1445 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 RBM47A0AV96 593 aaKnown RBP7.69□□□□□ -1.18
CLCN3-203ENST00000502998 BICDL2A1A5D9 508 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 DDX11L8A8MPP1 907 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 TIMM44O43615 452 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 C21orf2O43822 256 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 OATP04181 439 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 CYP2C19P33261 490 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 HNRNPUQ00839 825 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLCN3-203ENST00000502998 NOLC1Q14978 699 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLCN3-203ENST00000502998 CATIPQ7Z7H3 387 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 TXLNBQ8N3L3 684 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 FNBP4Q8N3X1 1017 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-203ENST00000502998 STAG1Q8WVM7 1258 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 DRC1Q96MC2 740 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 ORAI2Q96SN7 254 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 RETREG1Q9H6L5 497 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 TOMM22Q9NS69 142 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 ZKSCAN5Q9Y2L8 839 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLCN3-203ENST00000502998 ATRNO75882 1429 aa7.69□□□□□ -1.18
CLCN3-203ENST00000502998 VIRMAQ69YN4 1812 aaKnown RBP7.68□□□□□ -1.18
CLCN3-203ENST00000502998 LAMC1P11047 1609 aa7.68□□□□□ -1.18
CLCN3-203ENST00000502998 HNRNPH2P55795 449 aaKnown RBP7.68□□□□□ -1.18
CLCN3-203ENST00000502998 RBBP5Q15291 538 aaKnown RBP7.68□□□□□ -1.18
CLCN3-203ENST00000502998 SKOR2Q2VWA4 1001 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-203ENST00000502998 SPRYD3Q8NCJ5 442 aa7.68□□□□□ -1.18
CLCN3-203ENST00000502998 CCDC26Q8TAB7 109 aa7.68□□□□□ -1.18
CLCN3-203ENST00000502998 MARVELD3Q96A59 401 aa7.68□□□□□ -1.18
CLCN3-203ENST00000502998 GPBP1L1Q9HC44 474 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-203ENST00000502998 PUF60Q9UHX1 559 aaKnown RBP7.68□□□□□ -1.18
CLCN3-203ENST00000502998 DDX41Q9UJV9 622 aaKnown RBP7.68□□□□□ -1.18
CLCN3-203ENST00000502998 USP21Q9UK80 565 aa7.68□□□□□ -1.18
CLCN3-203ENST00000502998 BLOC1S6Q9UL45 172 aa7.68□□□□□ -1.18
CLCN3-203ENST00000502998 PDZRN3Q9UPQ7 1066 aa7.68□□□□□ -1.18
CLCN3-203ENST00000502998 SMG6Q86US8 1419 aaKnown RBP7.68□□□□□ -1.18
CLCN3-203ENST00000502998 BCL9LQ86UU0 1499 aa7.68□□□□□ -1.18
CLCN3-203ENST00000502998 CDC42BPGQ6DT37 1551 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 ERICH4A6NGS2 130 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 TPPPO94811 219 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 MAP4K4O95819 1239 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-203ENST00000502998 TPM1P09493 284 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 VCAM1P19320 739 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 ALDH1B1P30837 517 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 RDXP35241 583 aaKnown RBP7.67□□□□□ -1.18
CLCN3-203ENST00000502998 PRPHP41219 470 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 SESN3P58005 492 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 PDIA5Q14554 519 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 SLC5A9Q2M3M2 681 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 FILIP1Q7Z7B0 1213 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 DEFB132Q7Z7B7 95 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 NCAPG2Q86XI2 1143 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 KRT222Q8N1A0 295 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 DRAXINQ8NBI3 349 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-203ENST00000502998 FBXW7Q969H0 707 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 CCDC102AQ96A19 550 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 FMNL2Q96PY5 1086 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 RWDD1Q9H446 243 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-203ENST00000502998 TRPV5Q9NQA5 729 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 GNL3LQ9NVN8 582 aaKnown RBP7.67□□□□□ -1.18
CLCN3-203ENST00000502998 CCDC39Q9UFE4 941 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 TRAK1Q9UPV9 953 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 ANKRD30BQ9BXX2 1392 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 PIK3C2GO75747 1445 aa7.67□□□□□ -1.18
CLCN3-203ENST00000502998 SHTN1A0MZ66 631 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 MYO1CO00159 1063 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 TRAK2O60296 914 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 ECEL1O95672 775 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 MYBL2P10244 700 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 MCM4P33991 863 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 USP8P40818 1118 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 POU5F1Q01860 360 aaKnown RBP7.66□□□□□ -1.18
CLCN3-203ENST00000502998 CCDC15Q0P6D6 951 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 SOGA3Q5TF21 947 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 TMEM132EQ6IEE7 984 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 LEKR1Q6ZMV7 388 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 WAPLQ7Z5K2 1190 aa7.66□□□□□ -1.18
CLCN3-203ENST00000502998 CRACR2AQ9BSW2 395 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms