RNA–Protein interactions for RNA: ENST00000502804.2

CXCL1P1-201, Transcript of C-X-C motif chemokine ligand 1 pseudogene 1, humanhuman

BASIC

Gene CXCL1P1, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P1-201ENST00000502804 IPO8O15397 1037 aaKnown RBP21.45■■□□□ 1.02
CXCL1P1-201ENST00000502804 CTSWP56202 376 aa21.45■■□□□ 1.02
CXCL1P1-201ENST00000502804 RASSF7Q02833 373 aa21.45■■□□□ 1.02
CXCL1P1-201ENST00000502804 CC2D2BQ6DHV5 1058 aa21.45■■□□□ 1.02
CXCL1P1-201ENST00000502804 TMX4Q9H1E5 349 aaPredicted RBP21.45■■□□□ 1.02
CXCL1P1-201ENST00000502804 NFKBIEO00221 500 aa21.44■■□□□ 1.02
CXCL1P1-201ENST00000502804 OLFM4Q6UX06 510 aa21.44■■□□□ 1.02
CXCL1P1-201ENST00000502804 RTKN2Q8IZC4 609 aa21.44■■□□□ 1.02
CXCL1P1-201ENST00000502804 PLA2G12BQ9BX93 195 aa21.44■■□□□ 1.02
CXCL1P1-201ENST00000502804 TTLL11Q8NHH1 800 aa21.43■■□□□ 1.02
CXCL1P1-201ENST00000502804 FRAT1Q92837 279 aaPredicted RBP21.43■■□□□ 1.02
CXCL1P1-201ENST00000502804 YTHDC1Q96MU7 727 aaKnown RBP21.43■■□□□ 1.02
CXCL1P1-201ENST00000502804 CCDC85AQ96PX6 553 aaPredicted RBP21.43■■□□□ 1.02
CXCL1P1-201ENST00000502804 TAOK3Q9H2K8 898 aa21.43■■□□□ 1.02
CXCL1P1-201ENST00000502804 ATP6V0A2Q9Y487 856 aa21.43■■□□□ 1.02
CXCL1P1-201ENST00000502804 CCT4P50991 539 aaKnown RBP21.42■■□□□ 1.02
CXCL1P1-201ENST00000502804 GRIPAP1Q4V328 841 aa21.42■■□□□ 1.02
CXCL1P1-201ENST00000502804 C9orf131Q5VYM1 1079 aa21.42■■□□□ 1.02
CXCL1P1-201ENST00000502804 TMC4Q7Z404 712 aa21.42■■□□□ 1.02
CXCL1P1-201ENST00000502804 CELF1Q92879 486 aaKnown RBP21.42■■□□□ 1.02
CXCL1P1-201ENST00000502804 LTBP3Q9NS15 1303 aa21.42■■□□□ 1.02
CXCL1P1-201ENST00000502804 LMNB1P20700 586 aa21.41■■□□□ 1.02
CXCL1P1-201ENST00000502804 SP8Q8IXZ3 490 aa21.41■■□□□ 1.02
CXCL1P1-201ENST00000502804 SEC31BQ9NQW1 1179 aa21.41■■□□□ 1.02
CXCL1P1-201ENST00000502804 RNF181Q9P0P0 153 aa21.41■■□□□ 1.02
CXCL1P1-201ENST00000502804 UTRNP46939 3433 aa21.41■■□□□ 1.02
CXCL1P1-201ENST00000502804 RPS8P62241 208 aaKnown RBP21.4■■□□□ 1.02
CXCL1P1-201ENST00000502804 FKBP4Q02790 459 aaKnown RBP eCLIP21.4■■□□□ 1.02
CXCL1P1-201ENST00000502804 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
CXCL1P1-201ENST00000502804 FER1L6Q2WGJ9 1857 aa21.4■■□□□ 1.02
CXCL1P1-201ENST00000502804 UTYO14607 1347 aa21.39■■□□□ 1.01
CXCL1P1-201ENST00000502804 NBPF7P0C2Y1 421 aaPredicted RBP21.39■■□□□ 1.01
CXCL1P1-201ENST00000502804 ZKSCAN2Q63HK3 967 aa21.39■■□□□ 1.01
CXCL1P1-201ENST00000502804 GREM2Q9H772 168 aa21.39■■□□□ 1.01
CXCL1P1-201ENST00000502804 RTL9Q8NET4 1388 aa21.38■■□□□ 1.01
CXCL1P1-201ENST00000502804 CSF1RP07333 972 aa21.38■■□□□ 1.01
CXCL1P1-201ENST00000502804 TRIM27P14373 513 aa21.38■■□□□ 1.01
CXCL1P1-201ENST00000502804 PRELPP51888 382 aa21.38■■□□□ 1.01
CXCL1P1-201ENST00000502804 CDC5LQ99459 802 aaKnown RBP21.38■■□□□ 1.01
CXCL1P1-201ENST00000502804 SNED1Q8TER0 1413 aa21.38■■□□□ 1.01
CXCL1P1-201ENST00000502804 TAF1P21675 1872 aa21.37■■□□□ 1.01
CXCL1P1-201ENST00000502804 FOXO4P98177 505 aa21.37■■□□□ 1.01
CXCL1P1-201ENST00000502804 SLC51AQ86UW1 340 aa21.37■■□□□ 1.01
CXCL1P1-201ENST00000502804 ANKRD18AQ8IVF6 992 aa21.37■■□□□ 1.01
CXCL1P1-201ENST00000502804 PSMD1Q99460 953 aa21.37■■□□□ 1.01
CXCL1P1-201ENST00000502804 USP44Q9H0E7 712 aa21.37■■□□□ 1.01
CXCL1P1-201ENST00000502804 MYH3P11055 1940 aa21.37■■□□□ 1.01
CXCL1P1-201ENST00000502804 INTS3Q68E01 1043 aaKnown RBP21.36■■□□□ 1.01
CXCL1P1-201ENST00000502804 SUCLG2Q96I99 432 aa21.36■■□□□ 1.01
CXCL1P1-201ENST00000502804 SBF1O95248 1867 aa21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 ITGA6P23229 1130 aa21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 FAM161AQ3B820 660 aa21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 EPHA10Q5JZY3 1008 aa21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 LMBR1LQ6UX01 489 aa21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 DPP8Q6V1X1 898 aaPredicted RBP21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 MPNDQ8N594 471 aa21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 CLUAP1Q96AJ1 413 aa21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 ZNF277Q9NRM2 450 aaPredicted RBP21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 CHMP3Q9Y3E7 222 aa21.35■■□□□ 1.01
CXCL1P1-201ENST00000502804 COL4A1P02462 1669 aa21.34■■□□□ 1.01
CXCL1P1-201ENST00000502804 RCAN3Q9UKA8 241 aa21.34■■□□□ 1.01
CXCL1P1-201ENST00000502804 TNNQ9UQP3 1299 aa21.34■■□□□ 1.01
CXCL1P1-201ENST00000502804 ANKRD18BA2A2Z9 1011 aa21.33■■□□□ 1.01
CXCL1P1-201ENST00000502804 IGHMBP2P38935 993 aaKnown RBP21.33■■□□□ 1.01
CXCL1P1-201ENST00000502804 IFIT5Q13325 482 aaKnown RBP21.33■■□□□ 1.01
CXCL1P1-201ENST00000502804 SUPT20HQ8NEM7 779 aa21.33■■□□□ 1.01
CXCL1P1-201ENST00000502804 KAZALD1Q96I82 304 aa21.33■■□□□ 1.01
CXCL1P1-201ENST00000502804 NSFL1CQ9UNZ2 370 aaKnown RBP21.33■■□□□ 1.01
CXCL1P1-201ENST00000502804 ZC3H4Q9UPT8 1303 aaKnown RBP21.32■■□□□ 1
CXCL1P1-201ENST00000502804 IARSP41252 1262 aaKnown RBP21.32■■□□□ 1
CXCL1P1-201ENST00000502804 ZNF784Q8NCA9 323 aaPredicted RBP21.32■■□□□ 1
CXCL1P1-201ENST00000502804 RTFDC1Q9BY42 306 aaPredicted RBP21.32■■□□□ 1
CXCL1P1-201ENST00000502804 BSDC1Q9NW68 430 aaPredicted RBP21.32■■□□□ 1
CXCL1P1-201ENST00000502804 LRRC37AA6NMS7 1700 aa21.32■■□□□ 1
CXCL1P1-201ENST00000502804 UBTFL1P0CB47 393 aaPredicted RBP21.31■■□□□ 1
CXCL1P1-201ENST00000502804 CCDC57Q2TAC2 916 aa21.31■■□□□ 1
CXCL1P1-201ENST00000502804 FTSJ3Q8IY81 847 aaKnown RBP21.31■■□□□ 1
CXCL1P1-201ENST00000502804 BICC1Q9H694 974 aaKnown RBP21.31■■□□□ 1
CXCL1P1-201ENST00000502804 HDAC5Q9UQL6 1122 aa21.31■■□□□ 1
CXCL1P1-201ENST00000502804 CCDC88AQ3V6T2 1871 aa21.3■■□□□ 1
CXCL1P1-201ENST00000502804 GPSM2P81274 684 aa21.3■■□□□ 1
CXCL1P1-201ENST00000502804 DZIP1LQ8IYY4 767 aaKnown RBP21.3■■□□□ 1
CXCL1P1-201ENST00000502804 MPHOSPH8Q99549 860 aa21.3■■□□□ 1
CXCL1P1-201ENST00000502804 VPS33BQ9H267 617 aa21.3■■□□□ 1
CXCL1P1-201ENST00000502804 RABL6Q3YEC7 729 aaPredicted RBP21.29■■□□□ 1
CXCL1P1-201ENST00000502804 TMEM57Q8N5G2 664 aa21.29■■□□□ 1
CXCL1P1-201ENST00000502804 ANKIB1Q9P2G1 1089 aa21.29■■□□□ 1
CXCL1P1-201ENST00000502804 PPIP5K2O43314 1243 aa21.28■■□□□ 1
CXCL1P1-201ENST00000502804 GNAI3P08754 354 aa21.28■■□□□ 1
CXCL1P1-201ENST00000502804 TAF7LQ5H9L4 462 aa21.28■■□□□ 1
CXCL1P1-201ENST00000502804 LARGE2Q8N3Y3 721 aa21.28■■□□□ 1
CXCL1P1-201ENST00000502804 ANKRD44Q8N8A2 993 aa21.28■■□□□ 1
CXCL1P1-201ENST00000502804 ZNF526Q8TF50 670 aaPredicted RBP21.28■■□□□ 1
CXCL1P1-201ENST00000502804 JDP2Q8WYK2 163 aa21.28■■□□□ 1
CXCL1P1-201ENST00000502804 MEIS3Q99687 375 aa21.28■■□□□ 1
CXCL1P1-201ENST00000502804 PODXL2Q9NZ53 605 aa21.28■■□□□ 1
CXCL1P1-201ENST00000502804 TIAM2Q8IVF5 1701 aa21.27■■□□□ 1
CXCL1P1-201ENST00000502804 C6orf229H3BNL8 230 aa21.27■■□□□ 1
CXCL1P1-201ENST00000502804 MS4A1P11836 297 aa21.27■■□□□ 1
CXCL1P1-201ENST00000502804 MINPP1Q9UNW1 487 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms