RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 CHRDQ9H2X0 955 aa10.59□□□□□ -0.71
NEDD4-203ENST00000502612 MARK1Q9P0L2 795 aa10.59□□□□□ -0.71
NEDD4-203ENST00000502612 ZFATQ9P243 1243 aa10.59□□□□□ -0.71
NEDD4-203ENST00000502612 CCINQ13939 588 aa10.58□□□□□ -0.72
NEDD4-203ENST00000502612 ZNF326Q5BKZ1 582 aaKnown RBP10.58□□□□□ -0.72
NEDD4-203ENST00000502612 NLRP13Q86W25 1043 aa10.58□□□□□ -0.72
NEDD4-203ENST00000502612 C1orf127Q8N9H9 656 aa10.58□□□□□ -0.72
NEDD4-203ENST00000502612 SNX29Q8TEQ0 813 aa10.58□□□□□ -0.72
NEDD4-203ENST00000502612 CYP2E1P05181 493 aaPredicted RBP10.57□□□□□ -0.72
NEDD4-203ENST00000502612 POLR3DP05423 398 aaPredicted RBP10.57□□□□□ -0.72
NEDD4-203ENST00000502612 FGFR3P22607 806 aa10.57□□□□□ -0.72
NEDD4-203ENST00000502612 CTBSQ01459 385 aa10.57□□□□□ -0.72
NEDD4-203ENST00000502612 SPEM2Q0P670 501 aa10.57□□□□□ -0.72
NEDD4-203ENST00000502612 GMCL1Q96IK5 515 aa10.57□□□□□ -0.72
NEDD4-203ENST00000502612 DUSP9Q99956 384 aaKnown RBP10.57□□□□□ -0.72
NEDD4-203ENST00000502612 ABI2Q9NYB9 513 aaPredicted RBP10.57□□□□□ -0.72
NEDD4-203ENST00000502612 ATXN7L1Q9ULK2 861 aaPredicted RBP10.57□□□□□ -0.72
NEDD4-203ENST00000502612 EREGO14944 169 aa10.56□□□□□ -0.72
NEDD4-203ENST00000502612 PHACTR2O75167 634 aa10.56□□□□□ -0.72
NEDD4-203ENST00000502612 NFKB1P19838 968 aa10.56□□□□□ -0.72
NEDD4-203ENST00000502612 IRS1P35568 1242 aa10.56□□□□□ -0.72
NEDD4-203ENST00000502612 LAMC2Q13753 1193 aa10.56□□□□□ -0.72
NEDD4-203ENST00000502612 PI16Q6UXB8 463 aa10.56□□□□□ -0.72
NEDD4-203ENST00000502612 ZFYVE28Q9HCC9 887 aa10.56□□□□□ -0.72
NEDD4-203ENST00000502612 MMP20O60882 483 aa10.55□□□□□ -0.72
NEDD4-203ENST00000502612 CPNE3O75131 537 aaKnown RBP10.55□□□□□ -0.72
NEDD4-203ENST00000502612 PRPF40AO75400 957 aaKnown RBP10.55□□□□□ -0.72
NEDD4-203ENST00000502612 SV2AQ7L0J3 742 aa10.55□□□□□ -0.72
NEDD4-203ENST00000502612 KANSL3Q9P2N6 904 aa10.55□□□□□ -0.72
NEDD4-203ENST00000502612 PARP2Q9UGN5 583 aa10.55□□□□□ -0.72
NEDD4-203ENST00000502612 E9PSI1 815 aa10.54□□□□□ -0.72
NEDD4-203ENST00000502612 RARAP10276 462 aa10.54□□□□□ -0.72
NEDD4-203ENST00000502612 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
NEDD4-203ENST00000502612 BHMTQ93088 406 aa10.54□□□□□ -0.72
NEDD4-203ENST00000502612 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
NEDD4-203ENST00000502612 NANOS1Q8WY41 292 aaKnown RBP10.53□□□□□ -0.72
NEDD4-203ENST00000502612 PNMA5Q96PV4 448 aa10.53□□□□□ -0.72
NEDD4-203ENST00000502612 DNAJC25Q9H1X3 360 aa10.53□□□□□ -0.72
NEDD4-203ENST00000502612 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.53□□□□□ -0.72
NEDD4-203ENST00000502612 C2CD2LO14523 706 aa10.52□□□□□ -0.73
NEDD4-203ENST00000502612 NEFLP07196 543 aa10.52□□□□□ -0.73
NEDD4-203ENST00000502612 GAS6Q14393 721 aa10.52□□□□□ -0.73
NEDD4-203ENST00000502612 TTC39BQ5VTQ0 682 aaPredicted RBP10.52□□□□□ -0.73
NEDD4-203ENST00000502612 EPS8L3Q8TE67 593 aaKnown RBP10.52□□□□□ -0.73
NEDD4-203ENST00000502612 CCDC74AQ96AQ1 378 aa10.52□□□□□ -0.73
NEDD4-203ENST00000502612 TRERF1Q96PN7 1200 aa10.52□□□□□ -0.73
NEDD4-203ENST00000502612 C11orf16Q9NQ32 467 aa10.52□□□□□ -0.73
NEDD4-203ENST00000502612 NXF1Q9UBU9 619 aaKnown RBP10.52□□□□□ -0.73
NEDD4-203ENST00000502612 COL13A1Q5TAT6 717 aaPredicted RBP10.51□□□□□ -0.73
NEDD4-203ENST00000502612 ALG1LQ6GMV1 187 aa10.51□□□□□ -0.73
NEDD4-203ENST00000502612 NPHS2Q9NP85 383 aa10.51□□□□□ -0.73
NEDD4-203ENST00000502612 LATS2Q9NRM7 1088 aa10.51□□□□□ -0.73
NEDD4-203ENST00000502612 PHF24Q9UPV7 400 aa10.51□□□□□ -0.73
NEDD4-203ENST00000502612 RANGAP1P46060 587 aaPredicted RBP10.5□□□□□ -0.73
NEDD4-203ENST00000502612 FOXR1Q6PIV2 292 aa10.5□□□□□ -0.73
NEDD4-203ENST00000502612 OR13H1Q8NG92 308 aa10.5□□□□□ -0.73
NEDD4-203ENST00000502612 CES1P23141 567 aa10.49□□□□□ -0.73
NEDD4-203ENST00000502612 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
NEDD4-203ENST00000502612 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.49□□□□□ -0.73
NEDD4-203ENST00000502612 FAM182BQ5T319 152 aa10.49□□□□□ -0.73
NEDD4-203ENST00000502612 H3BM21 787 aa10.48□□□□□ -0.73
NEDD4-203ENST00000502612 RECKO95980 971 aa10.48□□□□□ -0.73
NEDD4-203ENST00000502612 ACPPP15309 386 aa10.48□□□□□ -0.73
NEDD4-203ENST00000502612 DAB2P98082 770 aa10.48□□□□□ -0.73
NEDD4-203ENST00000502612 MRPL58Q14197 206 aaKnown RBP10.48□□□□□ -0.73
NEDD4-203ENST00000502612 MLLT1Q03111 559 aaPredicted RBP10.47□□□□□ -0.73
NEDD4-203ENST00000502612 PSMD2Q13200 908 aa10.47□□□□□ -0.73
NEDD4-203ENST00000502612 ZNF787Q6DD87 383 aa10.47□□□□□ -0.73
NEDD4-203ENST00000502612 DHX32Q7L7V1 743 aaKnown RBP10.47□□□□□ -0.73
NEDD4-203ENST00000502612 TMC4Q7Z404 712 aa10.47□□□□□ -0.73
NEDD4-203ENST00000502612 GALNT12Q8IXK2 581 aa10.47□□□□□ -0.73
NEDD4-203ENST00000502612 FBF1Q8TES7 1133 aa10.47□□□□□ -0.73
NEDD4-203ENST00000502612 NSUN5Q96P11 429 aaKnown RBP10.47□□□□□ -0.73
NEDD4-203ENST00000502612 TLR7Q9NYK1 1049 aaKnown RBP10.47□□□□□ -0.73
NEDD4-203ENST00000502612 PRR12Q9ULL5 1215 aa10.47□□□□□ -0.73
NEDD4-203ENST00000502612 MAP3K6O95382 1288 aa10.46□□□□□ -0.73
NEDD4-203ENST00000502612 BMP4P12644 408 aa10.46□□□□□ -0.73
NEDD4-203ENST00000502612 GNA15P30679 374 aa10.46□□□□□ -0.73
NEDD4-203ENST00000502612 PCBP4P57723 403 aaKnown RBP10.46□□□□□ -0.73
NEDD4-203ENST00000502612 SYT9Q86SS6 491 aa10.46□□□□□ -0.73
NEDD4-203ENST00000502612 IGFLR1Q9H665 355 aa10.46□□□□□ -0.73
NEDD4-203ENST00000502612 ERBB4Q15303 1308 aa10.46□□□□□ -0.73
NEDD4-203ENST00000502612 PHF20L1A8MW92 1017 aa10.45□□□□□ -0.74
NEDD4-203ENST00000502612 ZBTB42B2RXF5 422 aa10.45□□□□□ -0.74
NEDD4-203ENST00000502612 MX2P20592 715 aa10.45□□□□□ -0.74
NEDD4-203ENST00000502612 TBC1D8BQ0IIM8 1120 aa10.45□□□□□ -0.74
NEDD4-203ENST00000502612 TSNAXIP1Q2TAA8 658 aa10.45□□□□□ -0.74
NEDD4-203ENST00000502612 PEAR1Q5VY43 1037 aaPredicted RBP10.45□□□□□ -0.74
NEDD4-203ENST00000502612 OSBPL7Q9BZF2 842 aa10.45□□□□□ -0.74
NEDD4-203ENST00000502612 KLF15Q9UIH9 416 aa10.45□□□□□ -0.74
NEDD4-203ENST00000502612 TRPA1O75762 1119 aa10.44□□□□□ -0.74
NEDD4-203ENST00000502612 PSAPP07602 524 aa10.44□□□□□ -0.74
NEDD4-203ENST00000502612 RNFT1Q5M7Z0 435 aa10.44□□□□□ -0.74
NEDD4-203ENST00000502612 LDLRAD1Q5T700 205 aa10.44□□□□□ -0.74
NEDD4-203ENST00000502612 ZNF468Q5VIY5 522 aaPredicted RBP10.44□□□□□ -0.74
NEDD4-203ENST00000502612 HFE2Q6ZVN8 426 aa10.44□□□□□ -0.74
NEDD4-203ENST00000502612 VTI1BQ9UEU0 232 aa10.44□□□□□ -0.74
NEDD4-203ENST00000502612 SALL4Q9UJQ4 1053 aa10.44□□□□□ -0.74
NEDD4-203ENST00000502612 GADD45BO75293 160 aaPredicted RBP10.43□□□□□ -0.74
NEDD4-203ENST00000502612 VAMP1P23763 118 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms