RNA–Protein interactions for RNA: ENST00000502379.5

SDHA-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 679 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-202ENST00000502379 MPNDQ8N594 471 aa28.6■■■□□ 2.17
SDHA-202ENST00000502379 JMYQ8N9B5 988 aa28.6■■■□□ 2.17
SDHA-202ENST00000502379 MYD88Q99836 296 aa28.6■■■□□ 2.17
SDHA-202ENST00000502379 IRS4O14654 1257 aaPredicted RBP28.59■■■□□ 2.17
SDHA-202ENST00000502379 DDX60Q8IY21 1712 aaKnown RBP28.59■■■□□ 2.17
SDHA-202ENST00000502379 TAF1P21675 1872 aa28.59■■■□□ 2.17
SDHA-202ENST00000502379 SUPT20HQ8NEM7 779 aa28.58■■■□□ 2.17
SDHA-202ENST00000502379 VPS33BQ9H267 617 aa28.58■■■□□ 2.17
SDHA-202ENST00000502379 CELF1Q92879 486 aaKnown RBP28.57■■■□□ 2.16
SDHA-202ENST00000502379 CLEC11AQ9Y240 323 aa28.57■■■□□ 2.16
SDHA-202ENST00000502379 PCNTO95613 3336 aa28.56■■■□□ 2.16
SDHA-202ENST00000502379 ZBTB38Q8NAP3 1195 aaPredicted RBP28.56■■■□□ 2.16
SDHA-202ENST00000502379 CHMP4AQ9BY43 222 aa28.56■■■□□ 2.16
SDHA-202ENST00000502379 TMC4Q7Z404 712 aa28.55■■■□□ 2.16
SDHA-202ENST00000502379 PNMA8AQ86V59 439 aaPredicted RBP28.55■■■□□ 2.16
SDHA-202ENST00000502379 METTL22Q9BUU2 404 aaPredicted RBP28.55■■■□□ 2.16
SDHA-202ENST00000502379 PASKQ96RG2 1323 aa28.54■■■□□ 2.16
SDHA-202ENST00000502379 ITGBL1O95965 494 aaPredicted RBP28.54■■■□□ 2.16
SDHA-202ENST00000502379 SCNN1DP51172 638 aa28.54■■■□□ 2.16
SDHA-202ENST00000502379 NCBP3Q53F19 620 aaKnown RBP28.54■■■□□ 2.16
SDHA-202ENST00000502379 CCDC191Q8NCU4 936 aa28.54■■■□□ 2.16
SDHA-202ENST00000502379 JARID2Q92833 1246 aaPredicted RBP28.54■■■□□ 2.16
SDHA-202ENST00000502379 ZNRF3Q9ULT6 936 aa28.54■■■□□ 2.16
SDHA-202ENST00000502379 SALL2Q9Y467 1007 aaPredicted RBP28.54■■■□□ 2.16
SDHA-202ENST00000502379 IL16Q14005 1332 aa28.53■■■□□ 2.16
SDHA-202ENST00000502379 DDX58O95786 925 aaKnown RBP28.53■■■□□ 2.16
SDHA-202ENST00000502379 EPS15P42566 896 aa28.53■■■□□ 2.16
SDHA-202ENST00000502379 CXCL9Q07325 125 aa28.53■■■□□ 2.16
SDHA-202ENST00000502379 KIAA2012Q0VF49 1180 aa28.53■■■□□ 2.16
SDHA-202ENST00000502379 TWISTNBQ3B726 338 aaPredicted RBP28.53■■■□□ 2.16
SDHA-202ENST00000502379 MAP3K2Q9Y2U5 619 aa28.53■■■□□ 2.16
SDHA-202ENST00000502379 COL4A1P02462 1669 aa28.52■■■□□ 2.16
SDHA-202ENST00000502379 CREBZFQ9NS37 354 aa28.52■■■□□ 2.16
SDHA-202ENST00000502379 CWC25Q9NXE8 425 aaPredicted RBP28.52■■■□□ 2.16
SDHA-202ENST00000502379 LMOD1P29536 600 aaPredicted RBP28.51■■■□□ 2.15
SDHA-202ENST00000502379 MAP1SQ66K74 1059 aaPredicted RBP28.51■■■□□ 2.15
SDHA-202ENST00000502379 KSR2Q6VAB6 950 aa28.51■■■□□ 2.15
SDHA-202ENST00000502379 LTBP1Q14766 1721 aa28.51■■■□□ 2.15
SDHA-202ENST00000502379 ADAMTSL1Q8N6G6 1762 aa28.5■■■□□ 2.15
SDHA-202ENST00000502379 PI4KAP2A4QPH2 592 aa28.5■■■□□ 2.15
SDHA-202ENST00000502379 PCCAP05165 728 aaPredicted RBP28.5■■■□□ 2.15
SDHA-202ENST00000502379 G2E3Q7L622 706 aa28.5■■■□□ 2.15
SDHA-202ENST00000502379 PI4KAP1Q8N8J0 262 aa28.5■■■□□ 2.15
SDHA-202ENST00000502379 STK31Q9BXU1 1019 aa28.5■■■□□ 2.15
SDHA-202ENST00000502379 RPS8P62241 208 aaKnown RBP28.49■■■□□ 2.15
SDHA-202ENST00000502379 CNTROBQ8N137 903 aa28.49■■■□□ 2.15
SDHA-202ENST00000502379 SEC31BQ9NQW1 1179 aa28.49■■■□□ 2.15
SDHA-202ENST00000502379 NSFL1CQ9UNZ2 370 aaKnown RBP28.49■■■□□ 2.15
SDHA-202ENST00000502379 SLC4A2P04920 1241 aa28.48■■■□□ 2.15
SDHA-202ENST00000502379 IGKV5-2P06315 115 aa28.48■■■□□ 2.15
SDHA-202ENST00000502379 GPSM2P81274 684 aa28.48■■■□□ 2.15
SDHA-202ENST00000502379 DUOX1Q9NRD9 1551 aa28.48■■■□□ 2.15
SDHA-202ENST00000502379 FANCIQ9NVI1 1328 aa28.47■■■□□ 2.15
SDHA-202ENST00000502379 LRRC37AA6NMS7 1700 aa28.46■■■□□ 2.15
SDHA-202ENST00000502379 YDJCA8MPS7 323 aa28.46■■■□□ 2.15
SDHA-202ENST00000502379 PDE8AO60658 829 aa28.46■■■□□ 2.15
SDHA-202ENST00000502379 RAD17O75943 681 aa28.46■■■□□ 2.15
SDHA-202ENST00000502379 HSP90B1P14625 803 aaKnown RBP28.46■■■□□ 2.15
SDHA-202ENST00000502379 WDR63Q8IWG1 891 aa28.46■■■□□ 2.15
SDHA-202ENST00000502379 GPRC5DQ9NZD1 345 aa28.46■■■□□ 2.15
SDHA-202ENST00000502379 POLLQ9UGP5 575 aa28.46■■■□□ 2.15
SDHA-202ENST00000502379 MKRN1Q9UHC7 482 aaKnown RBP28.46■■■□□ 2.15
SDHA-202ENST00000502379 GMPSP49915 693 aaPredicted RBP28.45■■■□□ 2.14
SDHA-202ENST00000502379 CIAPIN1Q6FI81 312 aa28.45■■■□□ 2.14
SDHA-202ENST00000502379 CCDC85AQ96PX6 553 aaPredicted RBP28.45■■■□□ 2.14
SDHA-202ENST00000502379 C6orf229H3BNL8 230 aa28.44■■■□□ 2.14
SDHA-202ENST00000502379 WASHC4Q2M389 1173 aa28.44■■■□□ 2.14
SDHA-202ENST00000502379 FAM9BQ8IZU0 186 aa28.44■■■□□ 2.14
SDHA-202ENST00000502379 TMEM88BA6NKF7 163 aa28.43■■■□□ 2.14
SDHA-202ENST00000502379 RIMBP2O15034 1052 aa28.43■■■□□ 2.14
SDHA-202ENST00000502379 CCDC152Q4G0S7 254 aa28.43■■■□□ 2.14
SDHA-202ENST00000502379 IFFO2Q5TF58 517 aa28.43■■■□□ 2.14
SDHA-202ENST00000502379 USP50Q70EL3 339 aaPredicted RBP28.43■■■□□ 2.14
SDHA-202ENST00000502379 VAMP4O75379 141 aa28.42■■■□□ 2.14
SDHA-202ENST00000502379 TNIP1Q15025 636 aa28.42■■■□□ 2.14
SDHA-202ENST00000502379 CWF19L2Q2TBE0 894 aaKnown RBP28.42■■■□□ 2.14
SDHA-202ENST00000502379 GPR101Q96P66 508 aaPredicted RBP28.42■■■□□ 2.14
SDHA-202ENST00000502379 SPINK5Q9NQ38 1064 aaPredicted RBP28.42■■■□□ 2.14
SDHA-202ENST00000502379 CDHR2Q9BYE9 1310 aa28.42■■■□□ 2.14
SDHA-202ENST00000502379 EXOSC9Q06265 439 aaKnown RBP28.41■■■□□ 2.14
SDHA-202ENST00000502379 TBC1D16Q8TBP0 767 aa28.41■■■□□ 2.14
SDHA-202ENST00000502379 ADARB2Q9NS39 739 aaKnown RBP28.41■■■□□ 2.14
SDHA-202ENST00000502379 NEURL1BA8MQ27 555 aa28.4■■■□□ 2.14
SDHA-202ENST00000502379 NEXNQ0ZGT2 675 aa28.4■■■□□ 2.14
SDHA-202ENST00000502379 DBNDD1Q9H9R9 158 aa28.4■■■□□ 2.14
SDHA-202ENST00000502379 FMR1Q06787 632 aaKnown RBP eCLIP28.39■■■□□ 2.143e-7■□□□□ 8.4
SDHA-202ENST00000502379 FLIIQ13045 1269 aa28.39■■■□□ 2.14
SDHA-202ENST00000502379 BCL2L13Q9BXK5 485 aa28.39■■■□□ 2.14
SDHA-202ENST00000502379 CNTNAP1P78357 1384 aa28.38■■■□□ 2.13
SDHA-202ENST00000502379 DOK7Q18PE1 504 aa28.38■■■□□ 2.13
SDHA-202ENST00000502379 PODXL2Q9NZ53 605 aa28.38■■■□□ 2.13
SDHA-202ENST00000502379 SHTN1A0MZ66 631 aa28.37■■■□□ 2.13
SDHA-202ENST00000502379 EYA3Q99504 573 aa28.37■■■□□ 2.13
SDHA-202ENST00000502379 KCNQ5Q9NR82 932 aa28.37■■■□□ 2.13
SDHA-202ENST00000502379 H7C1W4 665 aa28.36■■■□□ 2.13
SDHA-202ENST00000502379 HSPA1AP0DMV8 641 aaKnown RBP28.36■■■□□ 2.13
SDHA-202ENST00000502379 HSPA1BP0DMV9 641 aaKnown RBP28.36■■■□□ 2.13
SDHA-202ENST00000502379 CTSWP56202 376 aa28.36■■■□□ 2.13
SDHA-202ENST00000502379 TTLL11Q8NHH1 800 aa28.36■■■□□ 2.13
SDHA-202ENST00000502379 ANKIB1Q9P2G1 1089 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms