RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, human

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA4A-210	ENST00000498660	NOP58	Q9Y2X3	529 aa	Known RBP	10.87	□□□□□ -0.67
TUBA4A-210	ENST00000498660	CHMP3	Q9Y3E7	222 aa		10.87	□□□□□ -0.67
TUBA4A-210	ENST00000498660	SH3TC1	Q8TE82	1336 aa		10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	SMARCA5	O60264	1052 aa	Predicted RBP	10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	PHF14	O94880	888 aa		10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	HSPA6	P17066	643 aa		10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	RFC4	P35249	363 aa		10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	FOXO4	P98177	505 aa		10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	RTL5	Q5HYW3	569 aa	Predicted RBP	10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	LMBR1L	Q6UX01	489 aa		10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	SMIM5	Q71RC9	77 aa		10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	FAM89A	Q96GI7	184 aa		10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	UTP14A	Q9BVJ6	771 aa	Known RBP	10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	TSHZ2	Q9NRE2	1034 aa		10.86	□□□□□ -0.67
TUBA4A-210	ENST00000498660	USP42	Q9H9J4	1324 aa	Known RBP	10.85	□□□□□ -0.67
TUBA4A-210	ENST00000498660	IRS4	O14654	1257 aa	Predicted RBP	10.85	□□□□□ -0.67
TUBA4A-210	ENST00000498660	CTSW	P56202	376 aa		10.85	□□□□□ -0.67
TUBA4A-210	ENST00000498660	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
TUBA4A-210	ENST00000498660	TRAPPC3L	Q5T215	181 aa		10.85	□□□□□ -0.67
TUBA4A-210	ENST00000498660	USPL1	Q5W0Q7	1092 aa		10.85	□□□□□ -0.67
TUBA4A-210	ENST00000498660	RHPN1	Q8TCX5	695 aa		10.85	□□□□□ -0.67
TUBA4A-210	ENST00000498660	COPRS	Q9NQ92	184 aa		10.85	□□□□□ -0.67
TUBA4A-210	ENST00000498660	PA2G4	Q9UQ80	394 aa	Known RBP	10.85	□□□□□ -0.67
TUBA4A-210	ENST00000498660	SPEF2	Q9C093	1822 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	PDE8A	O60658	829 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	NTSR2	O95665	410 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	RFX5	P48382	616 aa	Predicted RBP	10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	BMP2KL	Q5H9B9	411 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	SUSD4	Q5VX71	490 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	ZNF526	Q8TF50	670 aa	Predicted RBP	10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	ARHGEF1	Q92888	912 aa	Known RBP	10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	NYX	Q9GZU5	481 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	BCL11A	Q9H165	835 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	SIL1	Q9H173	461 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	SRP68	Q9UHB9	627 aa	Known RBP	10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	CARMIL3	Q8ND23	1372 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	AK9	Q5TCS8	1911 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	AOX1	Q06278	1338 aa		10.84	□□□□□ -0.67
TUBA4A-210	ENST00000498660	MX1	P20591	662 aa		10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	PTPN12	Q05209	780 aa	Known RBP	10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	CCDC57	Q2TAC2	916 aa		10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	TAF7L	Q5H9L4	462 aa		10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	PLEKHM2	Q8IWE5	1019 aa		10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	CLASRP	Q8N2M8	674 aa	Known RBP	10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	GPATCH3	Q96I76	525 aa		10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	BACH2	Q9BYV9	841 aa		10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	BCL2L12	Q9HB09	334 aa		10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	IL1RAPL2	Q9NP60	686 aa		10.83	□□□□□ -0.68
TUBA4A-210	ENST00000498660	RTL9	Q8NET4	1388 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	FAM177B	A6PVY3	158 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	KIF3C	O14782	793 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	CSF1R	P07333	972 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	MMP10	P09238	476 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	IFIT5	Q13325	482 aa	Known RBP	10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	C8orf34	Q49A92	452 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	TTC22	Q5TAA0	569 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	TBC1D9B	Q66K14	1250 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	KLHDC4	Q8TBB5	520 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	SETDB2	Q96T68	719 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	OSBPL3	Q9H4L5	887 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	FBXO3	Q9UK99	471 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	WWC3	Q9ULE0	1092 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	SALL3	Q9BXA9	1300 aa		10.82	□□□□□ -0.68
TUBA4A-210	ENST00000498660	ARAP2	Q8WZ64	1704 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	ANKRD18B	A2A2Z9	1011 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	CIAO1	O76071	339 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	IFIT2	P09913	472 aa	Known RBP	10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	IL15	P40933	162 aa	Predicted RBP	10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	PDE1A	P54750	535 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	TGFB2	P61812	414 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	BICDL1	Q6ZP65	573 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	NLGN1	Q8N2Q7	840 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	ZNF609	O15014	1411 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	RIC1	Q4ADV7	1423 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660	TTC41P	Q6P2S7	1318 aa		10.81	□□□□□ -0.68
TUBA4A-210	ENST00000498660		A0A1B0GUL6	1792 aa		10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	EYA2	O00167	538 aa		10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	NPHP1	O15259	732 aa		10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	ITGA6	P23229	1130 aa		10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	GTF2E1	P29083	439 aa	Predicted RBP	10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	CCDC152	Q4G0S7	254 aa		10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	AACS	Q86V21	672 aa		10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	SYNE4	Q8N205	404 aa		10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	TTLL11	Q8NHH1	800 aa		10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	STAP2	Q9UGK3	403 aa		10.8	□□□□□ -0.68
TUBA4A-210	ENST00000498660	KIF13B	Q9NQT8	1826 aa		10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	ABCC12	Q96J65	1359 aa		10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	ERC2	O15083	957 aa		10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	EIF5B	O60841	1220 aa	Known RBP	10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	SASH1	O94885	1247 aa		10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	HCLS1	P14317	486 aa	Predicted RBP	10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	GSPT1	P15170	499 aa	Known RBP	10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	ERFE	Q4G0M1	354 aa		10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	NUTM1	Q86Y26	1132 aa		10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.79	□□□□□ -0.68
TUBA4A-210	ENST00000498660	GREM2	Q9H772	168 aa		10.79	□□□□□ -0.68

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