RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 POTEIP0CG38 1075 aa20.7■□□□□ 0.9
NR1H3-227ENST00000498548 POTEJP0CG39 1038 aa20.7■□□□□ 0.9
NR1H3-227ENST00000498548 APLP1P51693 650 aa20.7■□□□□ 0.9
NR1H3-227ENST00000498548 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
NR1H3-227ENST00000498548 CCDC191Q8NCU4 936 aa20.7■□□□□ 0.9
NR1H3-227ENST00000498548 JDP2Q8WYK2 163 aa20.7■□□□□ 0.9
NR1H3-227ENST00000498548 CELF1Q92879 486 aaKnown RBP20.7■□□□□ 0.9
NR1H3-227ENST00000498548 CWC25Q9NXE8 425 aaPredicted RBP20.7■□□□□ 0.9
NR1H3-227ENST00000498548 COL4A1P02462 1669 aa20.7■□□□□ 0.9
NR1H3-227ENST00000498548 AOC3Q16853 763 aa20.69■□□□□ 0.9
NR1H3-227ENST00000498548 GRIPAP1Q4V328 841 aa20.69■□□□□ 0.9
NR1H3-227ENST00000498548 MPNDQ8N594 471 aa20.69■□□□□ 0.9
NR1H3-227ENST00000498548 PPIP5K2O43314 1243 aa20.68■□□□□ 0.9
NR1H3-227ENST00000498548 IGKV5-2P06315 115 aa20.68■□□□□ 0.9
NR1H3-227ENST00000498548 DPP8Q6V1X1 898 aaPredicted RBP20.68■□□□□ 0.9
NR1H3-227ENST00000498548 CCDC85AQ96PX6 553 aaPredicted RBP20.68■□□□□ 0.9
NR1H3-227ENST00000498548 GJA3Q9Y6H8 435 aa20.68■□□□□ 0.9
NR1H3-227ENST00000498548 PCCAP05165 728 aaPredicted RBP20.67■□□□□ 0.9
NR1H3-227ENST00000498548 EIF6P56537 245 aaKnown RBP20.67■□□□□ 0.9
NR1H3-227ENST00000498548 SEC31BQ9NQW1 1179 aa20.67■□□□□ 0.9
NR1H3-227ENST00000498548 CWF19L2Q2TBE0 894 aaKnown RBP20.66■□□□□ 0.9
NR1H3-227ENST00000498548 L3MBTL3Q96JM7 780 aaPredicted RBP20.66■□□□□ 0.9
NR1H3-227ENST00000498548 TAF1DQ9H5J8 278 aaPredicted RBP20.66■□□□□ 0.9
NR1H3-227ENST00000498548 SCN4AP35499 1836 aa20.65■□□□□ 0.9
NR1H3-227ENST00000498548 FLIIQ13045 1269 aa20.65■□□□□ 0.9
NR1H3-227ENST00000498548 NIM1KQ8IY84 436 aa20.65■□□□□ 0.9
NR1H3-227ENST00000498548 RTFDC1Q9BY42 306 aaPredicted RBP20.65■□□□□ 0.9
NR1H3-227ENST00000498548 IQCA1LA6NCM1 817 aa20.64■□□□□ 0.89
NR1H3-227ENST00000498548 PDE8AO60658 829 aa20.64■□□□□ 0.89
NR1H3-227ENST00000498548 EAPPQ56P03 285 aaPredicted RBP20.64■□□□□ 0.89
NR1H3-227ENST00000498548 GPC2Q8N158 579 aa20.64■□□□□ 0.89
NR1H3-227ENST00000498548 SUPT20HQ8NEM7 779 aa20.64■□□□□ 0.89
NR1H3-227ENST00000498548 HACL1Q9UJ83 578 aa20.64■□□□□ 0.89
NR1H3-227ENST00000498548 RPS8P62241 208 aaKnown RBP20.63■□□□□ 0.89
NR1H3-227ENST00000498548 NEXNQ0ZGT2 675 aa20.63■□□□□ 0.89
NR1H3-227ENST00000498548 FKBP5Q13451 457 aaPredicted RBP20.63■□□□□ 0.89
NR1H3-227ENST00000498548 DNAJC5GQ8N7S2 189 aa20.63■□□□□ 0.89
NR1H3-227ENST00000498548 MYH16Q9H6N6 1097 aa20.63■□□□□ 0.89
NR1H3-227ENST00000498548 NSFL1CQ9UNZ2 370 aaKnown RBP20.63■□□□□ 0.89
NR1H3-227ENST00000498548 CACNA1FO60840 1977 aa20.63■□□□□ 0.89
NR1H3-227ENST00000498548 NEURL1BA8MQ27 555 aa20.62■□□□□ 0.89
NR1H3-227ENST00000498548 GPSM2P81274 684 aa20.62■□□□□ 0.89
NR1H3-227ENST00000498548 CHADLQ6NUI6 762 aa20.62■□□□□ 0.89
NR1H3-227ENST00000498548 TMC4Q7Z404 712 aa20.62■□□□□ 0.89
NR1H3-227ENST00000498548 EPHX2P34913 555 aa20.61■□□□□ 0.89
NR1H3-227ENST00000498548 CCDC152Q4G0S7 254 aa20.61■□□□□ 0.89
NR1H3-227ENST00000498548 GPR101Q96P66 508 aaPredicted RBP20.61■□□□□ 0.89
NR1H3-227ENST00000498548 VPS33BQ9H267 617 aa20.61■□□□□ 0.89
NR1H3-227ENST00000498548 CLEC11AQ9Y240 323 aa20.61■□□□□ 0.89
NR1H3-227ENST00000498548 LRRC37AA6NMS7 1700 aa20.61■□□□□ 0.89
NR1H3-227ENST00000498548 DUOX1Q9NRD9 1551 aa20.6■□□□□ 0.89
NR1H3-227ENST00000498548 ZNF521Q96K83 1311 aa20.6■□□□□ 0.89
NR1H3-227ENST00000498548 RIMBP2O15034 1052 aa20.6■□□□□ 0.89
NR1H3-227ENST00000498548 HSP90B1P14625 803 aaKnown RBP20.6■□□□□ 0.89
NR1H3-227ENST00000498548 KIAA2012Q0VF49 1180 aa20.6■□□□□ 0.89
NR1H3-227ENST00000498548 DNAAF4Q8WXU2 420 aa20.6■□□□□ 0.89
NR1H3-227ENST00000498548 ZNRF3Q9ULT6 936 aa20.6■□□□□ 0.89
NR1H3-227ENST00000498548 CEP350Q5VT06 3117 aa20.6■□□□□ 0.89
NR1H3-227ENST00000498548 CDHR2Q9BYE9 1310 aa20.59■□□□□ 0.89
NR1H3-227ENST00000498548 LTBP1Q14766 1721 aa20.59■□□□□ 0.89
NR1H3-227ENST00000498548 F6X3S4 739 aa20.59■□□□□ 0.89
NR1H3-227ENST00000498548 C6orf229H3BNL8 230 aa20.59■□□□□ 0.89
NR1H3-227ENST00000498548 EPS15P42566 896 aa20.59■□□□□ 0.89
NR1H3-227ENST00000498548 CXCL9Q07325 125 aa20.59■□□□□ 0.89
NR1H3-227ENST00000498548 POLLQ9UGP5 575 aa20.59■□□□□ 0.89
NR1H3-227ENST00000498548 H7C1W4 665 aa20.58■□□□□ 0.89
NR1H3-227ENST00000498548 RAD17O75943 681 aa20.58■□□□□ 0.89
NR1H3-227ENST00000498548 SCNN1DP51172 638 aa20.58■□□□□ 0.89
NR1H3-227ENST00000498548 UBE3BQ7Z3V4 1068 aa20.58■□□□□ 0.89
NR1H3-227ENST00000498548 LDHDQ86WU2 507 aa20.58■□□□□ 0.89
NR1H3-227ENST00000498548 CTSWP56202 376 aa20.57■□□□□ 0.88
NR1H3-227ENST00000498548 GCKRQ14397 625 aa20.57■□□□□ 0.88
NR1H3-227ENST00000498548 WASHC4Q2M389 1173 aa20.57■□□□□ 0.88
NR1H3-227ENST00000498548 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
NR1H3-227ENST00000498548 MYH3P11055 1940 aa20.57■□□□□ 0.88
NR1H3-227ENST00000498548 YDJCA8MPS7 323 aa20.56■□□□□ 0.88
NR1H3-227ENST00000498548 LMOD1P29536 600 aaPredicted RBP20.56■□□□□ 0.88
NR1H3-227ENST00000498548 TBC1D16Q8TBP0 767 aa20.56■□□□□ 0.88
NR1H3-227ENST00000498548 GREM2Q9H772 168 aa20.56■□□□□ 0.88
NR1H3-227ENST00000498548 DBNDD1Q9H9R9 158 aa20.56■□□□□ 0.88
NR1H3-227ENST00000498548 SPEF2Q9C093 1822 aa20.55■□□□□ 0.88
NR1H3-227ENST00000498548 DOK7Q18PE1 504 aa20.55■□□□□ 0.88
NR1H3-227ENST00000498548 CIAPIN1Q6FI81 312 aa20.55■□□□□ 0.88
NR1H3-227ENST00000498548 ANKRD18AQ8IVF6 992 aa20.55■□□□□ 0.88
NR1H3-227ENST00000498548 CASP7P55210 303 aa20.54■□□□□ 0.88
NR1H3-227ENST00000498548 MAP1SQ66K74 1059 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-227ENST00000498548 PNMA8AQ86V59 439 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-227ENST00000498548 LINS1Q8NG48 757 aa20.54■□□□□ 0.88
NR1H3-227ENST00000498548 KLRG1Q96E93 195 aa20.54■□□□□ 0.88
NR1H3-227ENST00000498548 ANKIB1Q9P2G1 1089 aa20.54■□□□□ 0.88
NR1H3-227ENST00000498548 GMPSP49915 693 aaPredicted RBP20.53■□□□□ 0.88
NR1H3-227ENST00000498548 CDCA7LQ96GN5 454 aa20.53■□□□□ 0.88
NR1H3-227ENST00000498548 KCNQ5Q9NR82 932 aa20.53■□□□□ 0.88
NR1H3-227ENST00000498548 ADAMTSL1Q8N6G6 1762 aa20.53■□□□□ 0.88
NR1H3-227ENST00000498548 WTIPA6NIX2 430 aaPredicted RBP20.52■□□□□ 0.88
NR1H3-227ENST00000498548 UFL1O94874 794 aa20.52■□□□□ 0.88
NR1H3-227ENST00000498548 ITGBL1O95965 494 aaPredicted RBP20.52■□□□□ 0.88
NR1H3-227ENST00000498548 BEND3Q5T5X7 828 aa20.52■□□□□ 0.88
NR1H3-227ENST00000498548 CNTROBQ8N137 903 aa20.52■□□□□ 0.88
NR1H3-227ENST00000498548 EYA3Q99504 573 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms