RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 MPNDQ8N594 471 aa15.69■□□□□ 0.1
CNOT4-211ENST00000498534 ZNRF3Q9ULT6 936 aa15.69■□□□□ 0.1
CNOT4-211ENST00000498534 ABT1Q9ULW3 272 aaKnown RBP15.69■□□□□ 0.1
CNOT4-211ENST00000498534 ABCC4O15439 1325 aa15.68■□□□□ 0.1
CNOT4-211ENST00000498534 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
CNOT4-211ENST00000498534 RASSF10A6NK89 507 aa15.68■□□□□ 0.1
CNOT4-211ENST00000498534 FOXN1O15353 648 aa15.68■□□□□ 0.1
CNOT4-211ENST00000498534 CTCFP49711 727 aaPredicted RBP15.68■□□□□ 0.1
CNOT4-211ENST00000498534 SCNN1DP51172 638 aa15.68■□□□□ 0.1
CNOT4-211ENST00000498534 ANKRD13DQ6ZTN6 518 aa15.67■□□□□ 0.1
CNOT4-211ENST00000498534 RTFDC1Q9BY42 306 aaPredicted RBP15.67■□□□□ 0.1
CNOT4-211ENST00000498534 PRDM10Q9NQV6 1147 aa15.67■□□□□ 0.1
CNOT4-211ENST00000498534 ADARB2Q9NS39 739 aaKnown RBP15.67■□□□□ 0.1
CNOT4-211ENST00000498534 CXCL9Q07325 125 aa15.66■□□□□ 0.1
CNOT4-211ENST00000498534 TNIP1Q15025 636 aa15.66■□□□□ 0.1
CNOT4-211ENST00000498534 HDGFL1Q5TGJ6 251 aa15.66■□□□□ 0.1
CNOT4-211ENST00000498534 TMC4Q7Z404 712 aa15.66■□□□□ 0.1
CNOT4-211ENST00000498534 PLBD2Q8NHP8 589 aa15.66■□□□□ 0.1
CNOT4-211ENST00000498534 WBP1LQ9NX94 342 aa15.66■□□□□ 0.1
CNOT4-211ENST00000498534 GPRC5DQ9NZD1 345 aa15.66■□□□□ 0.1
CNOT4-211ENST00000498534 CHPF2Q9P2E5 772 aa15.66■□□□□ 0.1
CNOT4-211ENST00000498534 DBF4Q9UBU7 674 aaPredicted RBP15.66■□□□□ 0.1
CNOT4-211ENST00000498534 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
CNOT4-211ENST00000498534 ADAMTSL1Q8N6G6 1762 aa15.65■□□□□ 0.1
CNOT4-211ENST00000498534 COL4A5P29400 1685 aa15.65■□□□□ 0.1
CNOT4-211ENST00000498534 HOXB7P09629 217 aa15.65■□□□□ 0.1
CNOT4-211ENST00000498534 MAP2K1Q02750 393 aaPredicted RBP15.65■□□□□ 0.1
CNOT4-211ENST00000498534 GRAPQ13588 217 aa15.65■□□□□ 0.1
CNOT4-211ENST00000498534 KRT24Q2M2I5 525 aa15.65■□□□□ 0.1
CNOT4-211ENST00000498534 SLC51AQ86UW1 340 aa15.65■□□□□ 0.1
CNOT4-211ENST00000498534 GRAPLQ8TC17 118 aaPredicted RBP15.65■□□□□ 0.1
CNOT4-211ENST00000498534 BCL2L13Q9BXK5 485 aa15.65■□□□□ 0.1
CNOT4-211ENST00000498534 HYPKQ9NX55 129 aa15.65■□□□□ 0.1
CNOT4-211ENST00000498534 ADAMTS8Q9UP79 889 aa15.65■□□□□ 0.1
CNOT4-211ENST00000498534 ZBTB12Q9Y330 459 aaPredicted RBP15.65■□□□□ 0.1
CNOT4-211ENST00000498534 WDR33Q9C0J8 1336 aaKnown RBP15.65■□□□□ 0.1
CNOT4-211ENST00000498534 ECE1P42892 770 aa15.64■□□□□ 0.09
CNOT4-211ENST00000498534 KIAA2012Q0VF49 1180 aa15.64■□□□□ 0.09
CNOT4-211ENST00000498534 CIAPIN1Q6FI81 312 aa15.64■□□□□ 0.09
CNOT4-211ENST00000498534 CFAP44Q96MT7 982 aa15.64■□□□□ 0.09
CNOT4-211ENST00000498534 GMPSP49915 693 aaPredicted RBP15.63■□□□□ 0.09
CNOT4-211ENST00000498534 PAXIP1Q6ZW49 1069 aaPredicted RBP15.63■□□□□ 0.09
CNOT4-211ENST00000498534 RAD17O75943 681 aa15.62■□□□□ 0.09
CNOT4-211ENST00000498534 DUSP27Q5VZP5 1158 aa15.62■□□□□ 0.09
CNOT4-211ENST00000498534 FAM89AQ96GI7 184 aa15.62■□□□□ 0.09
CNOT4-211ENST00000498534 BEGAINQ9BUH8 593 aa15.62■□□□□ 0.09
CNOT4-211ENST00000498534 ATP5J2-PTCD1G3V325 749 aa15.61■□□□□ 0.09
CNOT4-211ENST00000498534 H7C1D1 291 aa15.61■□□□□ 0.09
CNOT4-211ENST00000498534 TRAF5O00463 557 aa15.61■□□□□ 0.09
CNOT4-211ENST00000498534 LBX1P52954 281 aa15.61■□□□□ 0.09
CNOT4-211ENST00000498534 FMR1Q06787 632 aaKnown RBP eCLIP15.61■□□□□ 0.09
CNOT4-211ENST00000498534 SF3B3Q15393 1217 aaKnown RBP15.61■□□□□ 0.09
CNOT4-211ENST00000498534 CST9Q5W186 159 aa15.61■□□□□ 0.09
CNOT4-211ENST00000498534 ZC3H15Q8WU90 426 aaKnown RBP15.61■□□□□ 0.09
CNOT4-211ENST00000498534 ZNF428Q96B54 188 aa15.61■□□□□ 0.09
CNOT4-211ENST00000498534 GPR101Q96P66 508 aaPredicted RBP15.61■□□□□ 0.09
CNOT4-211ENST00000498534 ISCA1Q9BUE6 129 aa15.61■□□□□ 0.09
CNOT4-211ENST00000498534 NSFL1CQ9UNZ2 370 aaKnown RBP15.61■□□□□ 0.09
CNOT4-211ENST00000498534 ANKRD36CQ5JPF3 1778 aa15.61■□□□□ 0.09
CNOT4-211ENST00000498534 CDHR2Q9BYE9 1310 aa15.61■□□□□ 0.09
CNOT4-211ENST00000498534 HSP90B1P14625 803 aaKnown RBP15.6■□□□□ 0.09
CNOT4-211ENST00000498534 CALD1Q05682 793 aaKnown RBP15.6■□□□□ 0.09
CNOT4-211ENST00000498534 GRM1Q13255 1194 aa15.6■□□□□ 0.09
CNOT4-211ENST00000498534 TRIM28Q13263 835 aaKnown RBP15.6■□□□□ 0.09
CNOT4-211ENST00000498534 WASHC4Q2M389 1173 aa15.6■□□□□ 0.09
CNOT4-211ENST00000498534 RIC3Q7Z5B4 369 aa15.6■□□□□ 0.09
CNOT4-211ENST00000498534 CAPNS2Q96L46 248 aa15.6■□□□□ 0.09
CNOT4-211ENST00000498534 CNOT7Q9UIV1 285 aaKnown RBP15.6■□□□□ 0.09
CNOT4-211ENST00000498534 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
CNOT4-211ENST00000498534 C6orf229H3BNL8 230 aa15.59■□□□□ 0.09
CNOT4-211ENST00000498534 RTL5Q5HYW3 569 aaPredicted RBP15.59■□□□□ 0.09
CNOT4-211ENST00000498534 CHMP4AQ9BY43 222 aa15.59■□□□□ 0.09
CNOT4-211ENST00000498534 PGAP2Q9UHJ9 254 aa15.59■□□□□ 0.09
CNOT4-211ENST00000498534 TLL2Q9Y6L7 1015 aa15.59■□□□□ 0.09
CNOT4-211ENST00000498534 LAMB2P55268 1798 aa15.58■□□□□ 0.08
CNOT4-211ENST00000498534 IRS4O14654 1257 aaPredicted RBP15.58■□□□□ 0.08
CNOT4-211ENST00000498534 CELF2O95319 508 aaKnown RBP15.58■□□□□ 0.08
CNOT4-211ENST00000498534 RPS8P62241 208 aaKnown RBP15.58■□□□□ 0.08
CNOT4-211ENST00000498534 GNAI1P63096 354 aa15.58■□□□□ 0.08
CNOT4-211ENST00000498534 GOLGA2Q08379 1002 aa15.58■□□□□ 0.08
CNOT4-211ENST00000498534 CYP4F22Q6NT55 531 aa15.58■□□□□ 0.08
CNOT4-211ENST00000498534 CDC37L1Q7L3B6 337 aa15.58■□□□□ 0.08
CNOT4-211ENST00000498534 CELF1Q92879 486 aaKnown RBP15.58■□□□□ 0.08
CNOT4-211ENST00000498534 MBIPQ9NS73 344 aa15.58■□□□□ 0.08
CNOT4-211ENST00000498534 RIMBP2O15034 1052 aa15.57■□□□□ 0.08
CNOT4-211ENST00000498534 MAP2K2P36507 400 aa15.57■□□□□ 0.08
CNOT4-211ENST00000498534 DPF2Q92785 391 aa15.57■□□□□ 0.08
CNOT4-211ENST00000498534 EYA3Q99504 573 aa15.57■□□□□ 0.08
CNOT4-211ENST00000498534 GLIS2Q9BZE0 524 aaPredicted RBP15.57■□□□□ 0.08
CNOT4-211ENST00000498534 PRKRIP1Q9H875 184 aaPredicted RBP15.57■□□□□ 0.08
CNOT4-211ENST00000498534 YDJCA8MPS7 323 aa15.56■□□□□ 0.08
CNOT4-211ENST00000498534 G3V3G9 751 aa15.56■□□□□ 0.08
CNOT4-211ENST00000498534 ELL2O00472 640 aaPredicted RBP15.56■□□□□ 0.08
CNOT4-211ENST00000498534 APAF1O14727 1248 aa15.56■□□□□ 0.08
CNOT4-211ENST00000498534 HSPA8P11142 646 aaKnown RBP15.56■□□□□ 0.08
CNOT4-211ENST00000498534 HIRAP54198 1017 aaPredicted RBP15.56■□□□□ 0.08
CNOT4-211ENST00000498534 DCAF8Q5TAQ9 597 aa15.56■□□□□ 0.08
CNOT4-211ENST00000498534 SAPCD2Q86UD0 394 aa15.56■□□□□ 0.08
CNOT4-211ENST00000498534 ZBTB38Q8NAP3 1195 aaPredicted RBP15.56■□□□□ 0.08
CNOT4-211ENST00000498534 IFT57Q9NWB7 429 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms